Result of FASTA (omim) for
pF1KB9633
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9633, 462 aa
1>>>pF1KB9633 462 - 462 aa - 462 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6713+/-0.000455; mu= 7.0687+/- 0.029
mean_var=138.1507+/-27.234, 0's: 0 Z-trim(114.1): 25 B-trim: 107 in 2/51
Lambda= 0.109118
statistics sampled from 23751 (23776) to 23751 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.279), width: 16
Scan time: 10.160
The best scores are: opt bits E(85289)
NP_001276929 (OMIM: 605327) nuclear factor interle ( 462) 2941 474.8 2.1e-133
NP_005375 (OMIM: 605327) nuclear factor interleuki ( 462) 2941 474.8 2.1e-133
NP_001276928 (OMIM: 605327) nuclear factor interle ( 462) 2941 474.8 2.1e-133
XP_016870232 (OMIM: 605327) PREDICTED: nuclear fac ( 462) 2941 474.8 2.1e-133
XP_016870233 (OMIM: 605327) PREDICTED: nuclear fac ( 462) 2941 474.8 2.1e-133
NP_001138870 (OMIM: 188595) thyrotroph embryonic f ( 273) 194 42.3 0.002
NP_003207 (OMIM: 188595) thyrotroph embryonic fact ( 303) 194 42.3 0.0022
NP_001317304 (OMIM: 142385) hepatic leukemia facto ( 210) 188 41.3 0.0031
NP_002117 (OMIM: 142385) hepatic leukemia factor i ( 295) 188 41.3 0.0042
XP_011523007 (OMIM: 142385) PREDICTED: hepatic leu ( 211) 181 40.2 0.0067
XP_016881877 (OMIM: 124097) PREDICTED: D site-bind ( 182) 178 39.7 0.0083
XP_005257326 (OMIM: 142385) PREDICTED: hepatic leu ( 296) 181 40.2 0.0089
>>NP_001276929 (OMIM: 605327) nuclear factor interleukin (462 aa)
initn: 2941 init1: 2941 opt: 2941 Z-score: 2516.1 bits: 474.8 E(85289): 2.1e-133
Smith-Waterman score: 2941; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KB9 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
370 380 390 400 410 420
430 440 450 460
pF1KB9 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
::::::::::::::::::::::::::::::::::::::::::
NP_001 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
430 440 450 460
>>NP_005375 (OMIM: 605327) nuclear factor interleukin-3- (462 aa)
initn: 2941 init1: 2941 opt: 2941 Z-score: 2516.1 bits: 474.8 E(85289): 2.1e-133
Smith-Waterman score: 2941; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KB9 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
370 380 390 400 410 420
430 440 450 460
pF1KB9 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
::::::::::::::::::::::::::::::::::::::::::
NP_005 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
430 440 450 460
>>NP_001276928 (OMIM: 605327) nuclear factor interleukin (462 aa)
initn: 2941 init1: 2941 opt: 2941 Z-score: 2516.1 bits: 474.8 E(85289): 2.1e-133
Smith-Waterman score: 2941; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KB9 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
370 380 390 400 410 420
430 440 450 460
pF1KB9 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
::::::::::::::::::::::::::::::::::::::::::
NP_001 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
430 440 450 460
>>XP_016870232 (OMIM: 605327) PREDICTED: nuclear factor (462 aa)
initn: 2941 init1: 2941 opt: 2941 Z-score: 2516.1 bits: 474.8 E(85289): 2.1e-133
Smith-Waterman score: 2941; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KB9 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
370 380 390 400 410 420
430 440 450 460
pF1KB9 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
::::::::::::::::::::::::::::::::::::::::::
XP_016 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
430 440 450 460
>>XP_016870233 (OMIM: 605327) PREDICTED: nuclear factor (462 aa)
initn: 2941 init1: 2941 opt: 2941 Z-score: 2516.1 bits: 474.8 E(85289): 2.1e-133
Smith-Waterman score: 2941; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KB9 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEELLLSEGSVGKNKSSAC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVSSSCISVIK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKD
370 380 390 400 410 420
430 440 450 460
pF1KB9 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
::::::::::::::::::::::::::::::::::::::::::
XP_016 SGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDSG
430 440 450 460
>>NP_001138870 (OMIM: 188595) thyrotroph embryonic facto (273 aa)
initn: 175 init1: 175 opt: 194 Z-score: 182.4 bits: 42.3 E(85289): 0.002
Smith-Waterman score: 194; 43.3% identity (71.6% similar) in 67 aa overlap (61-127:191-257)
40 50 60 70 80 90
pF1KB9 ALTEVSEDSTTGEELLLSEGSVGKNKSSACRRKREFIPDEKKDAMYWEKRRKNNEAAKRS
. :. :.:::.:: :: .:.::: :::::
NP_001 VLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRS
170 180 190 200 210 220
100 110 120 130 140 150
pF1KB9 REKRRLNDLVLENKLIALGEENATLKAELLSLKLKFGLISSTAYAQEIQKLSNSTAVYFQ
:. :::.. . . : .::..:..:. :. . :
NP_001 RDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYGPL
230 240 250 260 270
160 170 180 190 200 210
pF1KB9 DYQTSKSNVSSFVDEHEPSMVSSSCISVIKHSPQSSLSDVSEVSSVEHTQESSVQGSCRS
>>NP_003207 (OMIM: 188595) thyrotroph embryonic factor i (303 aa)
initn: 175 init1: 175 opt: 194 Z-score: 181.7 bits: 42.3 E(85289): 0.0022
Smith-Waterman score: 194; 43.3% identity (71.6% similar) in 67 aa overlap (61-127:221-287)
40 50 60 70 80 90
pF1KB9 ALTEVSEDSTTGEELLLSEGSVGKNKSSACRRKREFIPDEKKDAMYWEKRRKNNEAAKRS
. :. :.:::.:: :: .:.::: :::::
NP_003 VLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRS
200 210 220 230 240 250
100 110 120 130 140 150
pF1KB9 REKRRLNDLVLENKLIALGEENATLKAELLSLKLKFGLISSTAYAQEIQKLSNSTAVYFQ
:. :::.. . . : .::..:..:. :. . :
NP_003 RDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYGPL
260 270 280 290 300
160 170 180 190 200 210
pF1KB9 DYQTSKSNVSSFVDEHEPSMVSSSCISVIKHSPQSSLSDVSEVSSVEHTQESSVQGSCRS
>>NP_001317304 (OMIM: 142385) hepatic leukemia factor is (210 aa)
initn: 184 init1: 184 opt: 188 Z-score: 179.0 bits: 41.3 E(85289): 0.0031
Smith-Waterman score: 188; 43.3% identity (71.6% similar) in 67 aa overlap (61-127:128-194)
40 50 60 70 80 90
pF1KB9 ALTEVSEDSTTGEELLLSEGSVGKNKSSACRRKREFIPDEKKDAMYWEKRRKNNEAAKRS
. .. ::::. :: :: .::::: :::::
NP_001 ALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARKVFIPDDLKDDKYWARRRKNNMAAKRS
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB9 REKRRLNDLVLENKLIALGEENATLKAELLSLKLKFGLISSTAYAQEIQKLSNSTAVYFQ
:. :::.. . . : .::..:. :. .:. ..:
NP_001 RDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILAKYEARHGPL
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB9 DYQTSKSNVSSFVDEHEPSMVSSSCISVIKHSPQSSLSDVSEVSSVEHTQESSVQGSCRS
>>NP_002117 (OMIM: 142385) hepatic leukemia factor isofo (295 aa)
initn: 184 init1: 184 opt: 188 Z-score: 176.8 bits: 41.3 E(85289): 0.0042
Smith-Waterman score: 188; 43.3% identity (71.6% similar) in 67 aa overlap (61-127:213-279)
40 50 60 70 80 90
pF1KB9 ALTEVSEDSTTGEELLLSEGSVGKNKSSACRRKREFIPDEKKDAMYWEKRRKNNEAAKRS
. .. ::::. :: :: .::::: :::::
NP_002 ALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARKVFIPDDLKDDKYWARRRKNNMAAKRS
190 200 210 220 230 240
100 110 120 130 140 150
pF1KB9 REKRRLNDLVLENKLIALGEENATLKAELLSLKLKFGLISSTAYAQEIQKLSNSTAVYFQ
:. :::.. . . : .::..:. :. .:. ..:
NP_002 RDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILAKYEARHGPL
250 260 270 280 290
160 170 180 190 200 210
pF1KB9 DYQTSKSNVSSFVDEHEPSMVSSSCISVIKHSPQSSLSDVSEVSSVEHTQESSVQGSCRS
>>XP_011523007 (OMIM: 142385) PREDICTED: hepatic leukemi (211 aa)
initn: 206 init1: 164 opt: 181 Z-score: 173.0 bits: 40.2 E(85289): 0.0067
Smith-Waterman score: 181; 42.6% identity (72.1% similar) in 68 aa overlap (61-127:128-195)
40 50 60 70 80
pF1KB9 ALTEVSEDSTTGEELLLSEGSVGKNKSSACRRKREFIPDE-KKDAMYWEKRRKNNEAAKR
. .. ::::. :.: :: .::::: ::::
XP_011 ALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARKVFIPDDLKQDDKYWARRRKNNMAAKR
100 110 120 130 140 150
90 100 110 120 130 140
pF1KB9 SREKRRLNDLVLENKLIALGEENATLKAELLSLKLKFGLISSTAYAQEIQKLSNSTAVYF
::. :::.. . . : .::..:. :. .:. ..:
XP_011 SRDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILAKYEARHGPL
160 170 180 190 200 210
150 160 170 180 190 200
pF1KB9 QDYQTSKSNVSSFVDEHEPSMVSSSCISVIKHSPQSSLSDVSEVSSVEHTQESSVQGSCR
462 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:52:07 2016 done: Fri Nov 4 17:52:08 2016
Total Scan time: 10.160 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]