Result of FASTA (omim) for
pF1KB9607
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9607, 197 aa
1>>>pF1KB9607 197 - 197 aa - 197 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7320+/-0.00029; mu= 5.5543+/- 0.018
mean_var=298.4480+/-66.534, 0's: 0 Z-trim(125.6): 1459 B-trim: 2692 in 1/60
Lambda= 0.074240
statistics sampled from 47648 (49659) to 47648 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.856), E-opt: 0.2 (0.582), width: 16
Scan time: 7.100
The best scores are: opt bits E(85289)
XP_016882933 (OMIM: 616841) PREDICTED: zinc finger ( 469) 374 52.5 1.3e-06
NP_001008801 (OMIM: 616841) zinc finger protein 46 ( 522) 374 52.5 1.3e-06
XP_016882932 (OMIM: 616841) PREDICTED: zinc finger ( 541) 374 52.6 1.4e-06
NP_001108231 (OMIM: 616775) tissue-resident T-cell ( 504) 367 51.8 2.2e-06
NP_775845 (OMIM: 616775) tissue-resident T-cell tr ( 504) 367 51.8 2.2e-06
XP_016856446 (OMIM: 616775) PREDICTED: zinc finger ( 513) 367 51.8 2.2e-06
NP_001292132 (OMIM: 609451) zinc finger protein 90 ( 636) 358 51.0 4.9e-06
NP_597715 (OMIM: 609451) zinc finger protein 90 ho ( 636) 358 51.0 4.9e-06
XP_005255861 (OMIM: 609451) PREDICTED: zinc finger ( 636) 358 51.0 4.9e-06
XP_016882236 (OMIM: 165260) PREDICTED: zinc finger ( 327) 352 49.9 5.2e-06
XP_011525220 (OMIM: 165260) PREDICTED: zinc finger ( 327) 352 49.9 5.2e-06
XP_016878441 (OMIM: 609451) PREDICTED: zinc finger ( 720) 358 51.0 5.3e-06
NP_003442 (OMIM: 601276) zinc finger protein 177 i ( 321) 351 49.8 5.6e-06
XP_006717360 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 351 49.8 5.9e-06
XP_016870664 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 351 49.8 5.9e-06
XP_011517370 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 351 49.8 5.9e-06
XP_011517371 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 351 49.8 5.9e-06
XP_011511364 (OMIM: 109565) PREDICTED: B-cell lymp ( 650) 355 50.6 6.2e-06
NP_001128210 (OMIM: 109565) B-cell lymphoma 6 prot ( 650) 355 50.6 6.2e-06
XP_016882695 (OMIM: 194550) PREDICTED: myeloid zin ( 450) 352 50.1 6.3e-06
XP_006723255 (OMIM: 165260) PREDICTED: zinc finger ( 491) 352 50.1 6.6e-06
NP_001308045 (OMIM: 165260) zinc finger and SCAN d ( 491) 352 50.1 6.6e-06
XP_011525219 (OMIM: 165260) PREDICTED: zinc finger ( 491) 352 50.1 6.6e-06
NP_862829 (OMIM: 165260) zinc finger and SCAN doma ( 491) 352 50.1 6.6e-06
NP_001166122 (OMIM: 601276) zinc finger protein 17 ( 481) 351 50.0 7e-06
NP_001073878 (OMIM: 603981) zinc finger protein 99 ( 864) 355 50.8 7.3e-06
NP_003424 (OMIM: 604074) zinc finger protein 132 [ ( 706) 353 50.5 7.6e-06
NP_008892 (OMIM: 194525) zinc finger protein 19 [H ( 458) 349 49.8 7.9e-06
NP_060478 (OMIM: 607414) fez family zinc finger pr ( 459) 349 49.8 7.9e-06
NP_003413 (OMIM: 194550) myeloid zinc finger 1 iso ( 734) 352 50.4 8.3e-06
NP_932172 (OMIM: 194550) myeloid zinc finger 1 iso ( 734) 352 50.4 8.3e-06
XP_011525566 (OMIM: 194550) PREDICTED: myeloid zin ( 764) 352 50.4 8.5e-06
XP_005259261 (OMIM: 194550) PREDICTED: myeloid zin ( 775) 352 50.4 8.6e-06
XP_011526674 (OMIM: 611811) PREDICTED: zinc finger ( 434) 346 49.4 9.6e-06
XP_016880512 (OMIM: 616463) PREDICTED: zinc finger ( 359) 344 49.1 1e-05
XP_011526673 (OMIM: 611811) PREDICTED: zinc finger ( 476) 346 49.5 1e-05
XP_016880511 (OMIM: 616463) PREDICTED: zinc finger ( 368) 344 49.1 1e-05
XP_011522308 (OMIM: 616463) PREDICTED: zinc finger ( 396) 344 49.2 1.1e-05
XP_016882860 (OMIM: 611811) PREDICTED: zinc finger ( 519) 346 49.5 1.1e-05
NP_001307884 (OMIM: 616463) zinc finger protein 23 ( 416) 344 49.2 1.1e-05
NP_001307882 (OMIM: 616463) zinc finger protein 23 ( 417) 344 49.2 1.1e-05
NP_001307883 (OMIM: 616463) zinc finger protein 23 ( 417) 344 49.2 1.1e-05
NP_001308574 (OMIM: 194555) zinc finger protein 22 ( 707) 348 49.9 1.1e-05
XP_016882750 (OMIM: 194555) PREDICTED: zinc finger ( 707) 348 49.9 1.1e-05
NP_037530 (OMIM: 194555) zinc finger protein 224 [ ( 707) 348 49.9 1.1e-05
XP_011526667 (OMIM: 611811) PREDICTED: zinc finger ( 556) 346 49.6 1.1e-05
XP_016882858 (OMIM: 611811) PREDICTED: zinc finger ( 556) 346 49.6 1.1e-05
XP_011526671 (OMIM: 611811) PREDICTED: zinc finger ( 556) 346 49.6 1.1e-05
XP_011526668 (OMIM: 611811) PREDICTED: zinc finger ( 556) 346 49.6 1.1e-05
XP_016882859 (OMIM: 611811) PREDICTED: zinc finger ( 556) 346 49.6 1.1e-05
>>XP_016882933 (OMIM: 616841) PREDICTED: zinc finger pro (469 aa)
initn: 673 init1: 194 opt: 374 Z-score: 240.0 bits: 52.5 E(85289): 1.3e-06
Smith-Waterman score: 374; 42.7% identity (70.9% similar) in 110 aa overlap (84-193:271-378)
60 70 80 90 100 110
pF1KB9 LLIDTQGVPYTVLVDEESQREPGASGAPGQKKCYSCPVCSRVFEYMSYLQRHSITHSEVK
.: :.: ::...: : ::: .:.: :. :
XP_016 TGEKPYECEECDKVFSRKSHLERHKRIHTGEKPYKCKVCDEAFAYNSYLAKHTILHTGEK
250 260 270 280 290 300
120 130 140 150 160 170
pF1KB9 PFECDICGKAFKRASHLARHHSIHLAGGGRPHGCPLCPRRFRDAGELAQHSRVHSGERPF
:. :. :::.:.: : ::::: .: : .:. : : . : ..: .: :.::::.:.
XP_016 PYTCNECGKVFNRLSTLARHHRLHT--GEKPYKCEECDKVFSRKSHLERHRRIHSGEKPY
310 320 330 340 350
180 190
pF1KB9 QCPHCPRRFMEQNTLQKHTRWKHP
.: .: . : ....:..: :
XP_016 KCEECCKVFSRKSNLERHRRIHTGEKPYKCKVCDKAFQRDSHLAQHQRVHTGEKPYKCNE
360 370 380 390 400 410
>>NP_001008801 (OMIM: 616841) zinc finger protein 468 is (522 aa)
initn: 673 init1: 194 opt: 374 Z-score: 239.5 bits: 52.5 E(85289): 1.3e-06
Smith-Waterman score: 374; 42.7% identity (70.9% similar) in 110 aa overlap (84-193:324-431)
60 70 80 90 100 110
pF1KB9 LLIDTQGVPYTVLVDEESQREPGASGAPGQKKCYSCPVCSRVFEYMSYLQRHSITHSEVK
.: :.: ::...: : ::: .:.: :. :
NP_001 TGEKPYECEECDKVFSRKSHLERHKRIHTGEKPYKCKVCDEAFAYNSYLAKHTILHTGEK
300 310 320 330 340 350
120 130 140 150 160 170
pF1KB9 PFECDICGKAFKRASHLARHHSIHLAGGGRPHGCPLCPRRFRDAGELAQHSRVHSGERPF
:. :. :::.:.: : ::::: .: : .:. : : . : ..: .: :.::::.:.
NP_001 PYTCNECGKVFNRLSTLARHHRLHT--GEKPYKCEECDKVFSRKSHLERHRRIHSGEKPY
360 370 380 390 400 410
180 190
pF1KB9 QCPHCPRRFMEQNTLQKHTRWKHP
.: .: . : ....:..: :
NP_001 KCEECCKVFSRKSNLERHRRIHTGEKPYKCKVCDKAFQRDSHLAQHQRVHTGEKPYKCNE
420 430 440 450 460 470
>>XP_016882932 (OMIM: 616841) PREDICTED: zinc finger pro (541 aa)
initn: 673 init1: 194 opt: 374 Z-score: 239.3 bits: 52.6 E(85289): 1.4e-06
Smith-Waterman score: 374; 42.7% identity (70.9% similar) in 110 aa overlap (84-193:343-450)
60 70 80 90 100 110
pF1KB9 LLIDTQGVPYTVLVDEESQREPGASGAPGQKKCYSCPVCSRVFEYMSYLQRHSITHSEVK
.: :.: ::...: : ::: .:.: :. :
XP_016 TGEKPYECEECDKVFSRKSHLERHKRIHTGEKPYKCKVCDEAFAYNSYLAKHTILHTGEK
320 330 340 350 360 370
120 130 140 150 160 170
pF1KB9 PFECDICGKAFKRASHLARHHSIHLAGGGRPHGCPLCPRRFRDAGELAQHSRVHSGERPF
:. :. :::.:.: : ::::: .: : .:. : : . : ..: .: :.::::.:.
XP_016 PYTCNECGKVFNRLSTLARHHRLHT--GEKPYKCEECDKVFSRKSHLERHRRIHSGEKPY
380 390 400 410 420 430
180 190
pF1KB9 QCPHCPRRFMEQNTLQKHTRWKHP
.: .: . : ....:..: :
XP_016 KCEECCKVFSRKSNLERHRRIHTGEKPYKCKVCDKAFQRDSHLAQHQRVHTGEKPYKCNE
440 450 460 470 480 490
>>NP_001108231 (OMIM: 616775) tissue-resident T-cell tra (504 aa)
initn: 604 init1: 173 opt: 367 Z-score: 235.6 bits: 51.8 E(85289): 2.2e-06
Smith-Waterman score: 375; 34.1% identity (53.7% similar) in 214 aa overlap (1-197:219-430)
10 20
pF1KB9 MLVLPS-PCPQPLAFSSVETME---GPP--
.:.::. : .:. :. : : :
NP_001 LHAFYPGYPLLLPPPHLFTYGALPSDQCPHLLMLPQDPSYPTMAMPSLLMMVNELGHPSA
190 200 210 220 230 240
30 40 50 60 70
pF1KB9 RRTCRSPEPGPSSSIGS--P-QASSP---PRPNHYLLIDTQGVPYTVL-VDEESQREPGA
: : :: .. :. : :: .: :. .. :. . : :: .:
NP_001 RWETLLPYPGAFQASGQALPSQARNPGAGAAPTDSPGLERGGMASPAKRVPLSSQTGTAA
250 260 270 280 290 300
80 90 100 110 120 130
pF1KB9 SGAPGQKKC----YSCPVCSRVFEYMSYLQRHSITHSEVKPFECDICGKAFKRASHLARH
: .:: : : .:.. : .: :. : .:: .::.: .: :.: . .:: .:
NP_001 LPYPLKKKNGKILYECNICGKSFGQLSNLKVHLRVHSGERPFQCALCQKSFTQLAHLQKH
310 320 330 340 350 360
140 150 160 170 180 190
pF1KB9 HSIHLAGGGRPHGCPLCPRRFRDAGELAQHSRVHSGERPFQCPHCPRRFMEQNTLQKHTR
: .: : ::: : .: .:: ....: : :.::: ::::: : :: .. :. : :
NP_001 HLVHT--GERPHKCSVCHKRFSSSSNLKTHLRLHSGARPFQCSVCRSRFTQHIHLKLHHR
370 380 390 400 410 420
pF1KB9 WKHP
. :
NP_001 LHAPQPCGLVHTQLPLASLACLAQWHQGALDLMAVASEKHMGYDIDEVKVSSTSQGKARA
430 440 450 460 470 480
>>NP_775845 (OMIM: 616775) tissue-resident T-cell transc (504 aa)
initn: 604 init1: 173 opt: 367 Z-score: 235.6 bits: 51.8 E(85289): 2.2e-06
Smith-Waterman score: 375; 34.1% identity (53.7% similar) in 214 aa overlap (1-197:219-430)
10 20
pF1KB9 MLVLPS-PCPQPLAFSSVETME---GPP--
.:.::. : .:. :. : : :
NP_775 LHAFYPGYPLLLPPPHLFTYGALPSDQCPHLLMLPQDPSYPTMAMPSLLMMVNELGHPSA
190 200 210 220 230 240
30 40 50 60 70
pF1KB9 RRTCRSPEPGPSSSIGS--P-QASSP---PRPNHYLLIDTQGVPYTVL-VDEESQREPGA
: : :: .. :. : :: .: :. .. :. . : :: .:
NP_775 RWETLLPYPGAFQASGQALPSQARNPGAGAAPTDSPGLERGGMASPAKRVPLSSQTGTAA
250 260 270 280 290 300
80 90 100 110 120 130
pF1KB9 SGAPGQKKC----YSCPVCSRVFEYMSYLQRHSITHSEVKPFECDICGKAFKRASHLARH
: .:: : : .:.. : .: :. : .:: .::.: .: :.: . .:: .:
NP_775 LPYPLKKKNGKILYECNICGKSFGQLSNLKVHLRVHSGERPFQCALCQKSFTQLAHLQKH
310 320 330 340 350 360
140 150 160 170 180 190
pF1KB9 HSIHLAGGGRPHGCPLCPRRFRDAGELAQHSRVHSGERPFQCPHCPRRFMEQNTLQKHTR
: .: : ::: : .: .:: ....: : :.::: ::::: : :: .. :. : :
NP_775 HLVHT--GERPHKCSVCHKRFSSSSNLKTHLRLHSGARPFQCSVCRSRFTQHIHLKLHHR
370 380 390 400 410 420
pF1KB9 WKHP
. :
NP_775 LHAPQPCGLVHTQLPLASLACLAQWHQGALDLMAVASEKHMGYDIDEVKVSSTSQGKARA
430 440 450 460 470 480
>>XP_016856446 (OMIM: 616775) PREDICTED: zinc finger pro (513 aa)
initn: 604 init1: 173 opt: 367 Z-score: 235.5 bits: 51.8 E(85289): 2.2e-06
Smith-Waterman score: 375; 34.1% identity (53.7% similar) in 214 aa overlap (1-197:228-439)
10 20
pF1KB9 MLVLPS-PCPQPLAFSSVETME---GPP--
.:.::. : .:. :. : : :
XP_016 LHAFYPGYPLLLPPPHLFTYGALPSDQCPHLLMLPQDPSYPTMAMPSLLMMVNELGHPSA
200 210 220 230 240 250
30 40 50 60 70
pF1KB9 RRTCRSPEPGPSSSIGS--P-QASSP---PRPNHYLLIDTQGVPYTVL-VDEESQREPGA
: : :: .. :. : :: .: :. .. :. . : :: .:
XP_016 RWETLLPYPGAFQASGQALPSQARNPGAGAAPTDSPGLERGGMASPAKRVPLSSQTGTAA
260 270 280 290 300 310
80 90 100 110 120 130
pF1KB9 SGAPGQKKC----YSCPVCSRVFEYMSYLQRHSITHSEVKPFECDICGKAFKRASHLARH
: .:: : : .:.. : .: :. : .:: .::.: .: :.: . .:: .:
XP_016 LPYPLKKKNGKILYECNICGKSFGQLSNLKVHLRVHSGERPFQCALCQKSFTQLAHLQKH
320 330 340 350 360 370
140 150 160 170 180 190
pF1KB9 HSIHLAGGGRPHGCPLCPRRFRDAGELAQHSRVHSGERPFQCPHCPRRFMEQNTLQKHTR
: .: : ::: : .: .:: ....: : :.::: ::::: : :: .. :. : :
XP_016 HLVHT--GERPHKCSVCHKRFSSSSNLKTHLRLHSGARPFQCSVCRSRFTQHIHLKLHHR
380 390 400 410 420 430
pF1KB9 WKHP
. :
XP_016 LHAPQPCGLVHTQLPLASLACLAQWHQGALDLMAVASEKHMGYDIDEVKVSSTSQGKARA
440 450 460 470 480 490
>>NP_001292132 (OMIM: 609451) zinc finger protein 90 hom (636 aa)
initn: 313 init1: 187 opt: 358 Z-score: 229.3 bits: 51.0 E(85289): 4.9e-06
Smith-Waterman score: 358; 42.7% identity (70.9% similar) in 110 aa overlap (84-193:279-386)
60 70 80 90 100 110
pF1KB9 LLIDTQGVPYTVLVDEESQREPGASGAPGQKKCYSCPVCSRVFEYMSYLQRHSITHSEVK
.: . : ::...:.. : : .: .:. :
NP_001 PGKKHHECTDCGKTFLWKTQLTEHQRIHTGEKPFECNVCGKAFRHSSSLGQHENAHTGEK
250 260 270 280 290 300
120 130 140 150 160 170
pF1KB9 PFECDICGKAFKRASHLARHHSIHLAGGGRPHGCPLCPRRFRDAGELAQHSRVHSGERPF
:..:..:::::.:.: :..:. :: : .:. : :: : :: . :.:: .::::.::
NP_001 PYQCSLCGKAFQRSSSLVQHQRIHT--GEKPYRCNLCGRSFRHGTSLTQHEVTHSGEKPF
310 320 330 340 350 360
180 190
pF1KB9 QCPHCPRRFMEQNTLQKHTRWKHP
:: .: . : . ..: .: :
NP_001 QCKECGKAFSRCSSLVQHERTHTGEKPFECSICGRAFGQSPSLYKHMRIHKRGKPYQSSN
370 380 390 400 410 420
>--
initn: 359 init1: 140 opt: 335 Z-score: 216.0 bits: 48.5 E(85289): 2.7e-05
Smith-Waterman score: 335; 37.4% identity (64.0% similar) in 139 aa overlap (56-193:471-601)
30 40 50 60 70 80
pF1KB9 RTCRSPEPGPSSSIGSPQASSPPRPNHYLLIDTQGVPYTVLVDEESQREPGASGAPGQKK
: : :: : :. : . ::.:
NP_001 ESTLTEVKSYHCNDCGEDFSHITDFTDHQRIHTAENPY----DCEQAFSQQAISHPGEKP
450 460 470 480 490
90 100 110 120 130 140
pF1KB9 CYSCPVCSRVFEY-MSYLQRHSITHSEVKPFECDICGKAFKRASHLARHHSIHLAGGGRP
:.: ::...:. :....: : :. ::.::. ::.::.: : :..:. : : .:
NP_001 -YQCNVCGKAFKRSTSFIEHHRI-HTGEKPYECNECGEAFSRRSSLTQHERTHT--GEKP
500 510 520 530 540 550
150 160 170 180 190
pF1KB9 HGCPLCPRRFRDAGELAQHSRVHSGERPFQCPHCPRRFMEQNTLQKHTRWKHP
. : : . : ... : :: :.:.::.:..: .: : : ....:. : :
NP_001 YECIDCGKAFSQSSSLIQHERTHTGEKPYECNECGRAFRKKTNLHDHQRIHTGEKPYSCK
560 570 580 590 600 610
NP_001 ECGKNFSRSSALTKHQRIHTRNKL
620 630
>>NP_597715 (OMIM: 609451) zinc finger protein 90 homolo (636 aa)
initn: 313 init1: 187 opt: 358 Z-score: 229.3 bits: 51.0 E(85289): 4.9e-06
Smith-Waterman score: 358; 42.7% identity (70.9% similar) in 110 aa overlap (84-193:279-386)
60 70 80 90 100 110
pF1KB9 LLIDTQGVPYTVLVDEESQREPGASGAPGQKKCYSCPVCSRVFEYMSYLQRHSITHSEVK
.: . : ::...:.. : : .: .:. :
NP_597 PGKKHHECTDCGKTFLWKTQLTEHQRIHTGEKPFECNVCGKAFRHSSSLGQHENAHTGEK
250 260 270 280 290 300
120 130 140 150 160 170
pF1KB9 PFECDICGKAFKRASHLARHHSIHLAGGGRPHGCPLCPRRFRDAGELAQHSRVHSGERPF
:..:..:::::.:.: :..:. :: : .:. : :: : :: . :.:: .::::.::
NP_597 PYQCSLCGKAFQRSSSLVQHQRIHT--GEKPYRCNLCGRSFRHGTSLTQHEVTHSGEKPF
310 320 330 340 350 360
180 190
pF1KB9 QCPHCPRRFMEQNTLQKHTRWKHP
:: .: . : . ..: .: :
NP_597 QCKECGKAFSRCSSLVQHERTHTGEKPFECSICGRAFGQSPSLYKHMRIHKRGKPYQSSN
370 380 390 400 410 420
>--
initn: 359 init1: 140 opt: 335 Z-score: 216.0 bits: 48.5 E(85289): 2.7e-05
Smith-Waterman score: 335; 37.4% identity (64.0% similar) in 139 aa overlap (56-193:471-601)
30 40 50 60 70 80
pF1KB9 RTCRSPEPGPSSSIGSPQASSPPRPNHYLLIDTQGVPYTVLVDEESQREPGASGAPGQKK
: : :: : :. : . ::.:
NP_597 ESTLTEVKSYHCNDCGEDFSHITDFTDHQRIHTAENPY----DCEQAFSQQAISHPGEKP
450 460 470 480 490
90 100 110 120 130 140
pF1KB9 CYSCPVCSRVFEY-MSYLQRHSITHSEVKPFECDICGKAFKRASHLARHHSIHLAGGGRP
:.: ::...:. :....: : :. ::.::. ::.::.: : :..:. : : .:
NP_597 -YQCNVCGKAFKRSTSFIEHHRI-HTGEKPYECNECGEAFSRRSSLTQHERTHT--GEKP
500 510 520 530 540 550
150 160 170 180 190
pF1KB9 HGCPLCPRRFRDAGELAQHSRVHSGERPFQCPHCPRRFMEQNTLQKHTRWKHP
. : : . : ... : :: :.:.::.:..: .: : : ....:. : :
NP_597 YECIDCGKAFSQSSSLIQHERTHTGEKPYECNECGRAFRKKTNLHDHQRIHTGEKPYSCK
560 570 580 590 600 610
NP_597 ECGKNFSRSSALTKHQRIHTRNKL
620 630
>>XP_005255861 (OMIM: 609451) PREDICTED: zinc finger pro (636 aa)
initn: 313 init1: 187 opt: 358 Z-score: 229.3 bits: 51.0 E(85289): 4.9e-06
Smith-Waterman score: 358; 42.7% identity (70.9% similar) in 110 aa overlap (84-193:279-386)
60 70 80 90 100 110
pF1KB9 LLIDTQGVPYTVLVDEESQREPGASGAPGQKKCYSCPVCSRVFEYMSYLQRHSITHSEVK
.: . : ::...:.. : : .: .:. :
XP_005 PGKKHHECTDCGKTFLWKTQLTEHQRIHTGEKPFECNVCGKAFRHSSSLGQHENAHTGEK
250 260 270 280 290 300
120 130 140 150 160 170
pF1KB9 PFECDICGKAFKRASHLARHHSIHLAGGGRPHGCPLCPRRFRDAGELAQHSRVHSGERPF
:..:..:::::.:.: :..:. :: : .:. : :: : :: . :.:: .::::.::
XP_005 PYQCSLCGKAFQRSSSLVQHQRIHT--GEKPYRCNLCGRSFRHGTSLTQHEVTHSGEKPF
310 320 330 340 350 360
180 190
pF1KB9 QCPHCPRRFMEQNTLQKHTRWKHP
:: .: . : . ..: .: :
XP_005 QCKECGKAFSRCSSLVQHERTHTGEKPFECSICGRAFGQSPSLYKHMRIHKRGKPYQSSN
370 380 390 400 410 420
>--
initn: 359 init1: 140 opt: 335 Z-score: 216.0 bits: 48.5 E(85289): 2.7e-05
Smith-Waterman score: 335; 37.4% identity (64.0% similar) in 139 aa overlap (56-193:471-601)
30 40 50 60 70 80
pF1KB9 RTCRSPEPGPSSSIGSPQASSPPRPNHYLLIDTQGVPYTVLVDEESQREPGASGAPGQKK
: : :: : :. : . ::.:
XP_005 ESTLTEVKSYHCNDCGEDFSHITDFTDHQRIHTAENPY----DCEQAFSQQAISHPGEKP
450 460 470 480 490
90 100 110 120 130 140
pF1KB9 CYSCPVCSRVFEY-MSYLQRHSITHSEVKPFECDICGKAFKRASHLARHHSIHLAGGGRP
:.: ::...:. :....: : :. ::.::. ::.::.: : :..:. : : .:
XP_005 -YQCNVCGKAFKRSTSFIEHHRI-HTGEKPYECNECGEAFSRRSSLTQHERTHT--GEKP
500 510 520 530 540 550
150 160 170 180 190
pF1KB9 HGCPLCPRRFRDAGELAQHSRVHSGERPFQCPHCPRRFMEQNTLQKHTRWKHP
. : : . : ... : :: :.:.::.:..: .: : : ....:. : :
XP_005 YECIDCGKAFSQSSSLIQHERTHTGEKPYECNECGRAFRKKTNLHDHQRIHTGEKPYSCK
560 570 580 590 600 610
XP_005 ECGKNFSRSSALTKHQRIHTRNKL
620 630
>>XP_016882236 (OMIM: 165260) PREDICTED: zinc finger and (327 aa)
initn: 478 init1: 189 opt: 352 Z-score: 228.8 bits: 49.9 E(85289): 5.2e-06
Smith-Waterman score: 382; 35.3% identity (62.5% similar) in 184 aa overlap (29-193:55-236)
10 20 30 40 50
pF1KB9 MLVLPSPCPQPLAFSSVETMEGPPRRTCRSPEPGPS--SSIGSPQASS---PPRPNHY
:. : : : :: . :. .: :: ...
XP_016 LSGEIWTKSVTQQIHFKKTSGPYKDVPTDQRGRESGASRNSSSAWPNLTSQEKPPSEDKF
30 40 50 60 70 80
60 70 80 90
pF1KB9 LLIDTQGV--PYTVLVDEESQ-RE-----PGASGAPGQKKC------YSCPVCSRVFEYM
:.:. :. ::: . :. :: .::. ...: :.: :...:
XP_016 DLVDAYGTEPPYTYSGKRSSKCRECRKMFQSASALEAHQKTHSRKTPYACSECGKAFSRS
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 SYLQRHSITHSEVKPFECDICGKAFKRASHLARHHSIHLAGGGRPHGCPLCPRRFRDAGE
..: .:...:. .:: :: :::::.:..::..:. :: : .:. : : . : . .
XP_016 THLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRIHT--GEKPYKCGECGKTFSRSTH
150 160 170 180 190 200
160 170 180 190
pF1KB9 LAQHSRVHSGERPFQCPHCPRRFMEQNTLQKHTRWKHP
:.::.:::.::::..: : . : ... : .: :
XP_016 LTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKCDACGRAFSDCSALIRH
210 220 230 240 250 260
XP_016 LRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSRSSALMVHLRIH
270 280 290 300 310 320
197 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:40:17 2016 done: Fri Nov 4 17:40:18 2016
Total Scan time: 7.100 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]