Result of FASTA (ccds) for
pF1KB9603
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9603, 345 aa
1>>>pF1KB9603 345 - 345 aa - 345 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3193+/-0.00089; mu= -4.7374+/- 0.054
mean_var=302.7210+/-61.202, 0's: 0 Z-trim(116.9): 67 B-trim: 0 in 0/50
Lambda= 0.073715
statistics sampled from 17475 (17542) to 17475 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.822), E-opt: 0.2 (0.539), width: 16
Scan time: 2.800
The best scores are: opt bits E(32554)
CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 2394 267.3 1.4e-71
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 637 80.6 3.4e-15
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 607 77.3 2.3e-14
CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 606 77.3 3.1e-14
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 593 75.8 6.5e-14
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 569 73.2 4.1e-13
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 566 73.0 5.4e-13
CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 556 71.8 9.1e-13
CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 ( 378) 552 71.4 1.4e-12
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 546 70.8 2.5e-12
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 546 70.9 2.6e-12
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 544 70.6 2.6e-12
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 544 70.6 2.6e-12
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 539 70.1 3.8e-12
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 539 70.1 3.8e-12
CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 ( 420) 539 70.1 3.8e-12
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 516 67.5 1.7e-11
CCDS35045.1 FOXB2 gene_id:442425|Hs108|chr9 ( 432) 516 67.6 2.1e-11
CCDS10957.2 FOXF1 gene_id:2294|Hs108|chr16 ( 379) 513 67.3 2.4e-11
CCDS9665.1 FOXA1 gene_id:3169|Hs108|chr14 ( 472) 515 67.6 2.4e-11
CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 ( 318) 508 66.7 3e-11
CCDS32255.1 FOXB1 gene_id:27023|Hs108|chr15 ( 325) 506 66.5 3.6e-11
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 508 66.8 4.1e-11
CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 ( 457) 504 66.4 5.4e-11
CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 ( 463) 504 66.4 5.4e-11
>>CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 (345 aa)
initn: 2394 init1: 2394 opt: 2394 Z-score: 1398.8 bits: 267.3 E(32554): 1.4e-71
Smith-Waterman score: 2394; 100.0% identity (100.0% similar) in 345 aa overlap (1-345:1-345)
10 20 30 40 50 60
pF1KB9 MSHLFDPRLPALAASPMLYLYGPERPGLPLAFAPAAALAASGRAETPQKPPYSYIALIAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MSHLFDPRLPALAASPMLYLYGPERPGLPLAFAPAAALAASGRAETPQKPPYSYIALIAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETHQRSAEAQPEAGSGAGGSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETHQRSAEAQPEAGSGAGGSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PAISRLQAAPAGPSPLLDGPSPPAPLHWPGTASPNEDAGDAAQGAAAVAVGQAARTGDGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PAISRLQAAPAGPSPLLDGPSPPAPLHWPGTASPNEDAGDAAQGAAAVAVGQAARTGDGP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKPPSGDELLGGAKPGPGGRLGASLLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKPPSGDELLGGAKPGPGGRLGASLLAA
250 260 270 280 290 300
310 320 330 340
pF1KB9 SSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPLQVPDTVLHFQ
:::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPLQVPDTVLHFQ
310 320 330 340
>>CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 (553 aa)
initn: 632 init1: 562 opt: 637 Z-score: 386.2 bits: 80.6 E(32554): 3.4e-15
Smith-Waterman score: 671; 42.6% identity (64.4% similar) in 298 aa overlap (49-319:78-367)
20 30 40 50 60 70
pF1KB9 YLYGPERPGLPLAFAPAAALAASGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQF
::::::::::.::::.::....::::::::
CCDS44 SHPAHAEQYPGGMARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQF
50 60 70 80 90 100
80 90 100 110 120 130
pF1KB9 IMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNY
::::::::.::.::::::::::::::.:::::::. .::::::::::: .:::::..
CCDS44 IMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF
110 120 130 140 150 160
140 150 160 170 180
pF1KB9 RRRKRKPKPGPGAPEAKRPRAETH--------QRSAEAQPEAGSG-AGGSGPAISRLQ--
::.:. : : . :. . . : .. : :: ..: : : : :.:
CCDS44 LRRRRRFKK-KDAVKDKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDI
170 180 190 200 210 220
190 200 210 220 230
pF1KB9 -----AAPAGPSPLLDGPSPPAPLH------WPGTASPNEDAGDAAQGAAAVAVGQAAR-
. :. :.:: :: : : : ::. .... ..:.. . .::
CCDS44 KTENGTCPSPPQPL----SPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARP
230 240 250 260 270 280
240 250 260 270 280 290
pF1KB9 -TGDGPGSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKPPSGDELLGG--AKPGPGGR
. :: : : . :.: .:..::.:.:... .:. .. :: .: :. . ..:
CCDS44 LSLDGADSAPPPPAPSAPPPH-HSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSR
290 300 310 320 330 340
300 310 320 330 340
pF1KB9 LG-ASLLAASSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPLQVPDTVLHFQ
: : :: .. : ..::. .: :
CCDS44 AGIAPPLALGA--YSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQA
350 360 370 380 390
>>CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 (376 aa)
initn: 681 init1: 557 opt: 607 Z-score: 371.2 bits: 77.3 E(32554): 2.3e-14
Smith-Waterman score: 612; 38.8% identity (58.7% similar) in 312 aa overlap (22-316:29-319)
10 20 30 40 50
pF1KB9 MSHLFDPRLPALAASPMLYLYGPERPGLPLAFAPAAALAASGRAETPQKPPYS
:: : : . ... .: . . ::::::
CCDS31 MMASYPEPEDAAGALLAPETGRTVKEPEGP--PPSPGKGGGGGGGTAPEKPDPAQKPPYS
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 YIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPRE
:.:::::::... :.:.::.::::.:. .::::. :..:::::::::::::.::.:::::
CCDS31 YVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPRE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 KGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETHQRSAEAQPEAG
: ::.:::::: : ::::.::::::.: .: :: .: . ... ::
CCDS31 GGGERKGNYWTLDPACEDMFEKGNYRRRRRMKRPF-------RP-PPAHFQPGKGLFGAG
120 130 140 150 160 170
180 190 200 210 220
pF1KB9 SGAGGSGPAISRLQAAPAGPSPLLDGPSPPAPLH-------WPGTASPNEDAGDAAQGAA
..::: : : :. : . : .:: :. :: :. . : ::
CCDS31 GAAGGCGVA----GAGADGYGYL----APPKYLQSGFLNNSWPLPQPPSPMPYASCQMAA
180 190 200 210 220
230 240 250 260 270
pF1KB9 AVAVGQAARTGDGPGSP---------LRPASRSSPKSSDKSKSFSIDSILAGKQGQKPPS
:.:.. :: .. ::::: ::. .: . .: .. . . . ::.
CCDS31 AAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQSMALPPGVVNSYNGLGGPPA
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB9 GDELLGGAKPGPGGR-LGASLLAASSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPLQ
. .: : .. : : ::. :: ... :
CCDS31 APPPPPHPHPHPHAHHLHA---AAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTS
290 300 310 320 330
340
pF1KB9 VPDTVLHFQ
CCDS31 APGLQFACARQPELAMMHCSYWDHDSKTGALHSRLDL
340 350 360 370
>>CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 (501 aa)
initn: 606 init1: 560 opt: 606 Z-score: 369.0 bits: 77.3 E(32554): 3.1e-14
Smith-Waterman score: 644; 41.7% identity (61.0% similar) in 336 aa overlap (14-333:35-339)
10 20 30 40
pF1KB9 MSHLFDPRLPALAASPM-LYLYGPER--PGLPLAFAPAAALAA
:::: .: ::. :. ..::
CCDS10 YSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYSAGMGRSYAPYHHHQP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 SGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHN
.. . ::::::::::.::::.:::...::::::::::::::::..:.::::::::::
CCDS10 AAPKDLV-KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHN
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 LSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAE
::::.:::::::. .::::::::::: .:::::.. ::.:. : . : :. ::
CCDS10 LSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKE-KEERA-
130 140 150 160 170 180
170 180 190 200 210
pF1KB9 THQRSAEAQPEAGSGAGGSGPAISRLQAAPAGPSPLL----DGPSPPAP-LHWPGTASPN
: . : : :..:: :: .: :: . .. :: : . : ::.
CCDS10 -HLK--EPPPAASKGA----PATPHLADAPKEAEKKVVIKSEAASPALPVITKVETLSPE
190 200 210 220 230
220 230 240 250 260 270
pF1KB9 EDAGDAAQGAAAVAVGQAARTGDGPGSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKP
.: ::. :.. : . :: . : . :. .:.. .::...:.. . .:
CCDS10 ----SALQGSPRSAASTPAGSPDG-SLPEHHAA--APNGL---PGFSVENIMTLRT--SP
240 250 260 270 280
280 290 300 310 320
pF1KB9 PSGDELLGGAKPGPGGRLGASL--LAASSSLRPPFNASLMLDPHVQG------GFYQLGI
:.: :: :: :: : . :: . :: . . .: .:: : :: ..
CCDS10 PGG-ELSPGA-----GRAGLVVPPLALPYAAAPP---AAYGQPCAQGLEAGAAGGYQCSM
290 300 310 320 330
330 340
pF1KB9 PFLSYFPLQVPDTVLHFQ
.: .
CCDS10 RAMSLYTGAERPAHMCVPPALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHHG
340 350 360 370 380 390
>>CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 (373 aa)
initn: 625 init1: 515 opt: 593 Z-score: 363.2 bits: 75.8 E(32554): 6.5e-14
Smith-Waterman score: 599; 39.5% identity (61.1% similar) in 296 aa overlap (27-307:30-306)
10 20 30 40 50
pF1KB9 MSHLFDPRLPALAASPMLYLYGPERPGLPLAFAPAAALAASGRA-ETPQ---KPPYS
:.: . :.. .:.:: . : :::::
CCDS35 MTAESGPPPPQPEVLATVKEERGETAAGAGVP---GEATGRGAGGRRRKRPLQRGKPPYS
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 YIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPRE
::::::::: :::.:.::.:::.:: .:::::.:: . :::::::::.:::::.:.:::
CCDS35 YIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPRE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 KGRPGKGSYWTLDPRCLDMFENGNY-RRRKRKPKPGPGAPEAKRPRAETHQRSAEAQPEA
::::::.::.::: ::::.:.. ::::: . .. : : . .: : :
CCDS35 AGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAA
120 130 140 150 160 170
180 190 200 210 220
pF1KB9 GSGAGGSGPAISRLQAAPAGPSPLLDGPSPPA-----PLHWPGTA-SPNEDAGDAAQGAA
.. :. :: : : :. . : .::. :...:... .: . : . .
CCDS35 AAIFPGAVPA-----ARPPYPGAVYAGYAPPSLAAPPPVYYPAASPGPCRVFGLVPERPL
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB9 AVAVGQAARTGDGPGSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKPPSGDELLGGAK
. .: : .:::. :: ..: .. . :: : .: . . ..:
CCDS35 SPELGPAP---SGPGGSCAFASAGAPATTTGYQP-------AGCTGARPANPSAY-AAAY
240 250 260 270 280
290 300 310 320 330 340
pF1KB9 PGPGGRL----GASLLAASSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPLQVPDTVL
:: : :....::.. : :
CCDS35 AGPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGVETTVDFYGRTSPGQFGALGACYN
290 300 310 320 330 340
>>CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 (408 aa)
initn: 540 init1: 510 opt: 569 Z-score: 348.9 bits: 73.2 E(32554): 4.1e-13
Smith-Waterman score: 569; 40.5% identity (57.2% similar) in 306 aa overlap (22-311:78-368)
10 20 30 40
pF1KB9 MSHLFDPRLPALAASPMLYLYGPERPG-LPLAF-APAAALAASGRAETPQK
:: :. . : :: . ::: :. : :
CCDS21 QKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDARQPAK
50 60 70 80 90 100
50 60 70 80 90 100
pF1KB9 PPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVK
:::::::::.::: ..:..:.::.:: :: :::.:. . .:::::::::::::::::
CCDS21 PPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVK
110 120 130 140 150 160
110 120 130 140 150 160
pF1KB9 VPREKGRPGKGSYWTLDPRCLDMFENGNY-RRRKR--KPKPGPGAPEAKRPRAETHQRSA
.::: :.::::.::.::: :::.::.. ::::: . . ::: . .: ..:
CCDS21 IPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGA-HLPHPFPLPAAHAA
170 180 190 200 210 220
170 180 190 200 210 220
pF1KB9 EAQPEAGSGAGGSGPAISRLQAAPAGPSPLLDGPSPPAPLHWPGTASPNEDAGDAAQGAA
.:. : :. ::. : .:.. : : : :: : .. : ::
CCDS21 LHNPRPGPLLGA--PALP--QPVPGAYPNTAPGRRPYALLH-PHPPRYLLLSAPAYAGAP
230 240 250 260 270 280
230 240 250 260 270
pF1KB9 AVAVGQAARTGDGPGS-P-LRPASRSSPKSSDKSK---------SFSIDSILAGKQGQKP
: : : ::. : :.:. .: :. ::::.::. : .:
CCDS21 KKAEGADLAT---PGTLPVLQPSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGT
290 300 310 320 330
280 290 300 310 320 330
pF1KB9 PSGDELLGGAKPGPGGRLGASLLAASSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPL
... : .: . :: ::: : :.
CCDS21 GAAQSL------SPTAWSYCPLLQRPSSLSDNFAATAAASGGGLRQRLRSHQGRGAGRAP
340 350 360 370 380 390
340
pF1KB9 QVPDTVLHFQ
CCDS21 VGRVGAAAVSGGGRGL
400
>>CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 (439 aa)
initn: 656 init1: 513 opt: 566 Z-score: 346.8 bits: 73.0 E(32554): 5.4e-13
Smith-Waterman score: 585; 39.1% identity (56.8% similar) in 338 aa overlap (14-305:64-397)
10 20 30
pF1KB9 MSHLFDPRLPALAASPMLYLYGPERPGLPLAF-----APAAAL
: : .. : :. : : :: .
CCDS34 EDEDEEEAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSA
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB9 AASGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIR
::: :. : ::: ::::::.::: ..:..:.::.:: :: ::::.:. . .::::::
CCDS34 AASEDARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIR
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB9 HNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNY-RRRKR--KPKPGPGAPEAK
:::::::::::.::: ::::::.::.::: :::.::.. ::::: . .: ::: .
CCDS34 HNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGA-HLP
160 170 180 190 200 210
160 170 180 190 200
pF1KB9 RPRAETHQRSAEAQPEAGSGAGGSGPAISRLQAAP-AGPS--PL-LDGPSPPAPL--HWP
.: ..: .:. : :. .: : : .::. : : : :: : :
CCDS34 HPFPLPAAHAALHNPRPGPLLGAPAPPQPVPGAYPNTGPGRRPYALLHPHPPRYLLLSAP
220 230 240 250 260 270
210 220 230 240 250
pF1KB9 GTA-SPNEDAG-DAAQGAA--------AVAVGQAART------GDGPGSPLRPASRSS--
. : .:.. : : : : ....:. ::. .:. : :: . ..:
CCDS34 AYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVSCKGSGE
280 290 300 310 320 330
260 270 280 290
pF1KB9 ---------PKSSDKSKSFSID-----SILAGKQGQKPPSGDELLGGAKPGPGGRLGASL
:. . : : .:: : :. . .. .: : :. ::. :
CCDS34 RVQGLRRVCPRPRGATAPCSSDRQACRTIL---QQQQRHQEEDCANGCAPTKGAVLGGHL
340 350 360 370 380
300 310 320 330 340
pF1KB9 LAASSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPLQVPDTVLHFQ
:::. ::
CCDS34 SAASALLRYQAVAEGSGLTSLAAPLGGEGTSPVFLVSPTPSSLAESAGPS
390 400 410 420 430
>>CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 (330 aa)
initn: 559 init1: 538 opt: 556 Z-score: 342.7 bits: 71.8 E(32554): 9.1e-13
Smith-Waterman score: 601; 41.0% identity (58.7% similar) in 317 aa overlap (47-334:16-324)
20 30 40 50 60 70
pF1KB9 MLYLYGPERPGLPLAFAPAAALAASGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIY
: :::::::::::::::..: ::.::.:::
CCDS13 MQQQPLPGPGAPTTEPTKPPYSYIALIAMAIQSSPGQRATLSGIY
10 20 30 40
80 90 100 110 120 130
pF1KB9 QFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENG
..:: :: ::. :: :::::::::::::.:::::::. .::::::::::: : ::::.:
CCDS13 RYIMGRFAFYRHNRPGWQNSIRHNLSLNECFVKVPRDDRKPGKGSYWTLDPDCHDMFEHG
50 60 70 80 90 100
140 150 160 170 180
pF1KB9 NYRRRKRKPKPGPGAPEAKRP-RAETHQRSAEAQ----PEAGSGAGGSGP-------AIS
.. ::.:. :: .. : .:. : .: :.: .: : : ..:
CCDS13 SFLRRRRRFTRQTGAEGTRGPAKARRGPLRATSQDPGVPNATTGRQCSFPPELPDPKGLS
110 120 130 140 150 160
190 200 210 220 230
pF1KB9 R---LQAAPAGPSP-LLDG-PSPPA-P--LHWPGTASPNEDAGDAAQGAAAVAVGQAART
. : ::. : :: : :: : . : : :.: :..... : : :
CCDS13 FGGLVGAMPASMCPATTDGRPRPPMEPKEISTPKPACPGE-LPVATSSSSCPAFGFPAGF
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB9 GDGPGSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKPPSGDELLGGAKPGPGGRLGAS
... . :. ::.:. :. . : .: : . ..::..: :.:.
CCDS13 SEAESFNKAPTPVLSPESGIGSSYQCRLQALNFCMGADP-GLEHLLASAAPSPAPP----
230 240 250 260 270
300 310 320 330 340
pF1KB9 LLAASSSLRPPFN-ASLMLDPHVQGGF-------YQLGI-PFLSYFPLQVPDTVLHFQ
. .::: :. . .: : ::: : ::. : : :
CCDS13 --TPPGSLRAPLPLPTDHKEPWVAGGFPVQGGSGYPLGLTPCLYRTPGMFFFE
280 290 300 310 320 330
>>CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 (378 aa)
initn: 555 init1: 493 opt: 552 Z-score: 339.6 bits: 71.4 E(32554): 1.4e-12
Smith-Waterman score: 566; 38.0% identity (58.0% similar) in 324 aa overlap (7-312:74-364)
10 20 30
pF1KB9 MSHLFDPRLPALAASPML-YLYGPERPGLP----LA
: ::. :::.: :: .:: :: :.
CCDS43 PQRPSFEGGGEYGATPNPYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLG
50 60 70 80 90 100
40 50 60 70 80
pF1KB9 FAPAAALAASGRAETPQ--KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDN
. . : .. : . .::::: :::::::. ::..:.::. :::.. : ::::. .
CCDS43 GSDLGWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKS
110 120 130 140 150 160
90 100 110 120 130 140
pF1KB9 RQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGP
. :::::::::::::::: ::::.. ::::.:::::: : ::.:::.::..
CCDS43 KAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKR-------
170 180 190 200 210
150 160 170 180 190 200
pF1KB9 GAPEAKRPRAETHQRSAEAQPEAGSGAGGSGPAISRLQAAPAGPSPLLDGPSPPAPLHWP
:: . . .. : .. :. ..: .. :. .::: :: . :
CCDS43 -----KRKSDVSSSTASLALEKTESSLPVDSPKTTE-------PQDILDGASPGGTTSSP
220 230 240 250 260
210 220 230 240 250 260
pF1KB9 GTASPNEDAGDAAQGAAAVAVGQAARTGDGPGS-PL-RPASRSSPKSSDKS-------KS
:. . : . .. : .: .: : :: :. ::. :::. .:
CCDS43 -EKRPSPPPSGAPCLNSFLSSMTAYVSGGSPTSHPLVTPGL--SPEPSDKTGQNSLTFNS
270 280 290 300 310 320
270 280 290 300 310
pF1KB9 FSIDSILAGKQGQKPPSGDELLGGAKPGPGGRL--GASLLAASSSLRPPFNASLMLDPHV
:: . :....: .:: :.: : . : :.:.: :.. : : :.
CCDS43 FSPLTNLSNHSG----GGD----WANPMPTNMLSYGGSVL---SQFSPHFYNSVNTSGVL
330 340 350 360 370
320 330 340
pF1KB9 QGGFYQLGIPFLSYFPLQVPDTVLHFQ
CCDS43 YPREGTEV
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 531 init1: 492 opt: 546 Z-score: 334.9 bits: 70.8 E(32554): 2.5e-12
Smith-Waterman score: 562; 40.7% identity (59.0% similar) in 317 aa overlap (39-306:115-418)
10 20 30 40 50 60
pF1KB9 LPALAASPMLYLYGPERPGLPLAFAPAAALAASGRAETPQ-KPPYSYIALIAMAIQDAPE
:.:: :..: ::::::::::.::: ..:.
CCDS75 GSPAPPGPAPAAGAGAGGGGGGGGAGGGGSAGSG-AKNPLVKPPYSYIALITMAILQSPK
90 100 110 120 130 140
70 80 90 100 110 120
pF1KB9 QRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDP
.:.::. : .:: :::.:... .:::::::::::::::::.::: : ::::.::::::
CCDS75 KRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDP
150 160 170 180 190 200
130 140 150 160 170 180
pF1KB9 RCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETHQRSAEAQPEAGSGA-GGSG-PAISR
. :::.::.. ::... : : : : : .::. :.:: ::.: :: .
CCDS75 ESADMFDNGSFLRRRKRFKRQPLLP----PNAA----AAESLLLRGAGAAGGAGDPAAAA
210 220 230 240 250
190 200 210 220 230
pF1KB9 LQAAPAGPSP-LLDGPSPPA---PLHWPGTASPNEDAGDAAQGAAAVAV-----------
:: : : : .: . :. : : :. . :: .:::.:
CCDS75 ALFPPAPPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPP
260 270 280 290 300 310
240 250 260 270
pF1KB9 -GQAA---RTGDG----------PGS-PLRPASRSSPKSSDKSKS-FSIDSILAGKQG--
: :: ::. : :: : :. ..: .: ..: :::.::..:. :
CCDS75 HGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARSPFSIESIIGGSLGPA
320 330 340 350 360 370
280 290 300 310
pF1KB9 -------------QKPPSGDELLGGAKPGPGGRLGASLLAASSSLRPPFNASLMLDPHVQ
: :: . . .: :.::. :. ::.... :
CCDS75 AAAAAAAQAAAAAQASPSPSPV--AAPPAPGSSGGGC--AAQAAVGPAAALTRSLVAAAA
380 390 400 410 420 430
320 330 340
pF1KB9 GGFYQLGIPFLSYFPLQVPDTVLHFQ
CCDS75 AAASSVSSSAALGTLHQGTALSSVENFTARISNC
440 450 460
345 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:37:57 2016 done: Fri Nov 4 17:37:58 2016
Total Scan time: 2.800 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]