Result of FASTA (ccds) for
pF1KB9600
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9600, 373 aa
1>>>pF1KB9600 373 - 373 aa - 373 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.9345+/-0.000965; mu= -1.5489+/- 0.058
mean_var=362.2695+/-75.800, 0's: 0 Z-trim(116.6): 84 B-trim: 155 in 1/50
Lambda= 0.067384
statistics sampled from 17157 (17241) to 17157 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.53), width: 16
Scan time: 3.400
The best scores are: opt bits E(32554)
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 2582 264.3 1.3e-70
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 793 90.3 2.6e-18
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 739 85.2 1.3e-16
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 721 83.5 4.4e-16
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 707 82.1 1.1e-15
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 629 74.4 1.8e-13
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 629 74.6 2.3e-13
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 617 73.3 4.3e-13
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 612 72.8 6.1e-13
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 608 72.4 8e-13
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 608 72.4 8e-13
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 607 72.3 8.4e-13
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 599 71.6 1.5e-12
CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 593 70.9 1.9e-12
CCDS35045.1 FOXB2 gene_id:442425|Hs108|chr9 ( 432) 594 71.1 2.1e-12
CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 574 69.2 8.9e-12
CCDS4472.1 FOXF2 gene_id:2295|Hs108|chr6 ( 444) 567 68.5 1.3e-11
CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 555 67.2 2.4e-11
CCDS9636.1 FOXG1 gene_id:2290|Hs108|chr14 ( 489) 546 66.5 5.8e-11
>>CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 (373 aa)
initn: 2582 init1: 2582 opt: 2582 Z-score: 1381.4 bits: 264.3 E(32554): 1.3e-70
Smith-Waterman score: 2582; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KB9 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYIA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 PGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 FPGAVPAARPPYPGAVYAGYAPPSLAAPPPVYYPAASPGPCRVFGLVPERPLSPELGPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 FPGAVPAARPPYPGAVYAGYAPPSLAAPPPVYYPAASPGPCRVFGLVPERPLSPELGPAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 SGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSAIFAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 SGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSAIFAAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GRLAGPASPPAGGSSGGVETTVDFYGRTSPGQFGALGACYNPGGQLGGASAGAYHARHAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GRLAGPASPPAGGSSGGVETTVDFYGRTSPGQFGALGACYNPGGQLGGASAGAYHARHAA
310 320 330 340 350 360
370
pF1KB9 AYPGGIDRFVSAM
:::::::::::::
CCDS35 AYPGGIDRFVSAM
370
>>CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 (319 aa)
initn: 766 init1: 697 opt: 793 Z-score: 442.3 bits: 90.3 E(32554): 2.6e-18
Smith-Waterman score: 857; 51.7% identity (63.5% similar) in 323 aa overlap (3-309:23-301)
10 20 30
pF1KB9 MTAESGPPPPQPEVLATVKEERGETAAGAG--VPGEATGR
: ::::: .: . : .: :.::: : .: : :
CCDS55 MAGRSDMDPPAAFSGFPALPAVAPSGPPP-SPLAGAEPGREPEEAAAGRGEAAPTPAPG-
10 20 30 40 50
40 50 60 70 80 90
pF1KB9 GAGGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQ
::::.:::::::::::::::::::.:::: :::::..::.:::::: ::::.:.:::
CCDS55 --PGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQ
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB9 NSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYP
:::::::::::::.:.::: : :::::::.::: : :::..::::::::::::..: :
CCDS55 NSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRAEL---P
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB9 AYMHDAAAAAAAAAAAAAAAAIFPGAVPAARPPYPGAVYAGYAP---PSLAAPPPVYYPA
: : ::: :: :: : :: ::: :.: .::: :.
CCDS55 A--HAAAA---------------PG------PPLPFP-YAPYAPAPGPALLVPPPSAGPG
180 190 200
220 230 240 250 260 270
pF1KB9 ASPGPCRVFGLVPERPLSPELGP--APSGPGGSCAFASAGAPATTTGYQPAGCTGARPAN
:: : :.:.. :.:::. :: : :: .:.: : . : :..: :.
CCDS55 PSP-PARLFSVDSLVNLQPELAGLGAPEPP--CCAAPDAAAAA----FPP--CAAA--AS
210 220 230 240 250
280 290 300 310 320
pF1KB9 PSAYA---------AAYAGPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGVETTVDF
: :. :. :: : : :. . :. : :: ::
CCDS55 PPLYSQVPDRLVLPATRPGP-GPLPAEPLLALAGPAAAL-GPLSPGEAYLRQPGFASGLE
260 270 280 290 300 310
330 340 350 360 370
pF1KB9 YGRTSPGQFGALGACYNPGGQLGGASAGAYHARHAAAYPGGIDRFVSAM
CCDS55 RYL
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 553 init1: 553 opt: 739 Z-score: 412.0 bits: 85.2 E(32554): 1.3e-16
Smith-Waterman score: 751; 41.6% identity (60.8% similar) in 365 aa overlap (3-353:83-414)
10 20 30
pF1KB9 MTAESGPPPPQPEVLATVKEERGETAAGAGVP
: ..: :: : : : :.:.:
CCDS75 RRRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAPAA------GAGAGGGGGG
60 70 80 90 100
40 50 60 70 80 90
pF1KB9 GEATGRGAGGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRD
: : : :..: : :: ::::::::::.::: ..:..::::. : .::. :::.::.
CCDS75 GGAGGGGSAGSGAKNPLV--KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYRE
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB9 NPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRS
. :::::::::.:::::.::::: : :::::::.:::.. :::..::::::::::::.
CCDS75 KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQ
170 180 190 200 210 220
160 170 180 190 200
pF1KB9 DL-----STYPAYMHDAAAAAAAAAAAAAAAAIFPGAVPAARPPYPGAVYAGYAP-----
: .. . . .:.::..:. :::::.:: :: :: : .: ::.:
CCDS75 PLLPPNAAAAESLLLRGAGAAGGAGDPAAAAALFP---PA--PPPPPHAY-GYGPYGCGY
230 240 250 260 270
210 220 230 240 250
pF1KB9 ----PSLAAPPPVYYPAASPGPCRVFGLVPERPLSPELGPAPSGPGGSCAFASAGAPATT
: : : .. ::. . .: .: :: : : : : :.: :.
CCDS75 GLQLPPYAPPSALFAAAAAAAAAAAF-----HPHSP---PPPPPPHG----AAAELARTA
280 290 300 310 320
260 270 280 290 300 310
pF1KB9 TGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGV
::.: .: :. : :: .:: .. . .: . : :::. :.......
CCDS75 FGYRPHPLGAALPGPLPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAA
330 340 350 360 370 380
320 330 340 350 360 370
pF1KB9 ETTVDFYGRTSPGQFGALGACYNPGGQLGGASAGAYHARHAAAYPGGIDRFVSAM
. .. ::. .: : ::.. :: .: :
CCDS75 AAQAS----PSPSPVAAPPA---PGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSS
390 400 410 420 430
CCDS75 SAALGTLHQGTALSSVENFTARISNC
440 450 460
>>CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 (495 aa)
initn: 536 init1: 536 opt: 721 Z-score: 402.2 bits: 83.5 E(32554): 4.4e-16
Smith-Waterman score: 763; 42.0% identity (59.8% similar) in 388 aa overlap (4-365:73-423)
10 20 30
pF1KB9 MTAESGP-PPPQPEVLATVKEERGETAA-GAGV
::: .:..::. :: .:: :.
CCDS30 SGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALAS----RGAAAAAGSPG
50 60 70 80 90
40 50 60 70 80
pF1KB9 PGEATGRGA---------GGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKF
:: :..::: :: . :: ::::::::::.::: ..:..::::. : .:
CCDS30 PGAAAARGAAGPGPGPPSGGAATRSPLV--KPPYSYIALITMAILQSPKKRLTLSEICEF
100 110 120 130 140 150
90 100 110 120 130 140
pF1KB9 ITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSF
:. :::.::.. :::::::::.:::::.::::: : :::::::.:::.. :::..:::
CCDS30 ISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSF
160 170 180 190 200 210
150 160 170 180 190
pF1KB9 LRRRKRFKRSDLST-YP-AYMHDAAAAAAAAAAAAAAAAIFPG--AVPAARPPYPGAVYA
:::::::::. : .: . : ..::::. .:..:: : : : :. :
CCDS30 LRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPA
220 230 240 250 260 270
200 210 220 230 240 250
pF1KB9 GYAPPSLAAPPPVYYP-------AASPGPCRVFGLVPERPLSPELGPAPSGPGGSCAFAS
::: :: : .: ::. .::.. .. : : .: : :: . .::.
CCDS30 YGAPPPGPAPHPHPHPHAFAFAAAAAAAPCQL-SVPPGRAAAP-----PPGPPTASVFAG
280 290 300 310 320 330
260 270 280 290 300 310
pF1KB9 AG-APATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSAIFAAAGRLAGPASPP
:: ::: :: .:. :. : :: : : :. . : . :. :::
CCDS30 AGSAPA------PAPASGSGPG-P--------GPAG-LPAFLGAELGCAKAFYAASLSPP
340 350 360 370
320 330 340 350 360
pF1KB9 AGGSSGGVETTVDFYGRTSPGQFGALGACYNPGGQLGGASAG---AYHARHAAAYPGGID
:.:...:. :.. : . . :: :: :::.:: .. : .. ::
CCDS30 AAGTAAGLPTALLRQGLKTDAGGGA-------GG--GGAGAGQRPSFSIDHIMGHGGGGA
380 390 400 410 420
370
pF1KB9 RFVSAM
CCDS30 APPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRFAS
430 440 450 460 470 480
>>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa)
initn: 687 init1: 574 opt: 707 Z-score: 395.0 bits: 82.1 E(32554): 1.1e-15
Smith-Waterman score: 712; 44.1% identity (63.2% similar) in 345 aa overlap (24-342:112-434)
10 20 30 40 50
pF1KB9 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRG-
: .:..: :: ..: .::: ..: .
CCDS62 PKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSG-SAGGLAPSKPKNSLV
90 100 110 120 130 140
60 70 80 90 100 110
pF1KB9 KPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFL
::::::::::.::: ..:...:::.:: .::..:::.::.. :::::::::.:::::.
CCDS62 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV
150 160 170 180 190 200
120 130 140 150 160
pF1KB9 KIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSD---LSTYPAYMHDAAAAAA
::::: : :::::::.:::..::::..:::::::::::: . : : : .. .: .
CCDS62 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYS
210 220 230 240 250 260
170 180 190 200 210 220
pF1KB9 AAAAAAAAAAIFPGAVPAARPP--YPGAVYAGYAPPSLAAPPP----VYYPAASPGPCRV
::::.::. : .:: .:.:. ..:. :. :: . :: : : :
CCDS62 LAAAAGAAG-------PYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPV
270 280 290 300 310
230 240 250 260 270
pF1KB9 FGLVPERPLSP--ELGPAPS------GPGGSCAFASAGAPATTTGYQPAGCTGA-----R
: : :: : ::: . ::: . . : :: :...: :. : : .
CCDS62 --LPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSE
320 330 340 350 360 370
280 290 300 310 320
pF1KB9 P-ANPSAYAAAYAGPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGVETTVDFYGRTS
: : :: : : : .:::. .:: .: .:::.:: .:.. . :
CCDS62 PSARPSFSIENIIGGGPAAP--GGSAV--GAGVAGG-----TGGSGGG--STAQSFLRP-
380 390 400 410
330 340 350 360 370
pF1KB9 PG--QFGALGACYNPGGQLGGASAGAYHARHAAAYPGGIDRFVSAM
:: : .:: : ..:
CCDS62 PGTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ
420 430 440 450 460 470
>>CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 (376 aa)
initn: 678 init1: 496 opt: 629 Z-score: 355.3 bits: 74.4 E(32554): 1.8e-13
Smith-Waterman score: 629; 36.9% identity (60.3% similar) in 320 aa overlap (12-330:18-324)
10 20 30 40 50
pF1KB9 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRGKP
::. :::: .: . ::.. : :.:: ..: ::
CCDS31 MMASYPEPEDAAGALLAPETGRTVKEPEGPPPS----PGKGGG-GGGGTAPEKPDPAQKP
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 PYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKI
::::.::::::: .. :.::::.:::..: .::::. : : :::::::::.::.::.:.
CCDS31 PYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 PREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAA
:::.: :::::.::: :::::.:.. :::.:.:: . ::... . . .:..::
CCDS31 PREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMKRP-FRPPPAHFQPGKGLFGAGGAA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 AAAAAIFPGAVPAARPPYPGAVYAGYAPPSLAAP-PPVYYPAASPGPCRVFGLVPERPLS
.. .. :: . : . .:. : : :: .: :: :.. . . .
CCDS31 GGCGVAGAGADGYGYLAPPKYLQSGFLNNSWPLPQPPSPMPYAS---CQM-AAAAAAAAA
180 190 200 210 220
240 250 260 270 280 290
pF1KB9 PELGPAPSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAG
. .:..::.. . . ..::.. : . : : . . .:: .: :
CCDS31 AAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQSMALPPGVVNSYNGLGGPPAAPPPPPH
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB9 SAIFAAAGRLAGPASPPAGGSSGGVETTVDFYGRTSPGQFGALGACYNPGGQLGGASAGA
: .: . :.:: . :. . :. ::
CCDS31 PHPHPHAHHLHAAAAPPPAPPHHGAAAPPP--GQLSPASPATAAPPAPAPTSAPGLQFAC
290 300 310 320 330 340
360 370
pF1KB9 YHARHAAAYPGGIDRFVSAM
CCDS31 ARQPELAMMHCSYWDHDSKTGALHSRLDL
350 360 370
>>CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 (553 aa)
initn: 684 init1: 540 opt: 629 Z-score: 353.3 bits: 74.6 E(32554): 2.3e-13
Smith-Waterman score: 641; 37.3% identity (56.9% similar) in 362 aa overlap (32-369:57-393)
10 20 30 40 50 60
pF1KB9 TAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRR-RKRPLQRGKPPYSYIA
:: . .:. : . .: . ::::::::
CCDS44 RAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPG-GMARAYGPYTPQPQPKDMVKPPYSYIA
30 40 50 60 70 80
70 80 90 100 110 120
pF1KB9 LIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGR
::.::: .::....::.:::.:: .:::::::: . :::::::::.::.::.:.::. .
CCDS44 LITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKK
90 100 110 120 130 140
130 140 150 160 170 180
pF1KB9 PGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAAI
::::.::.:::.. .:::.:::::::.:::..: .. .:
CCDS44 PGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKD-AVKDKEEKDRLHLKEPPP--------
150 160 170 180 190
190 200 210 220 230
pF1KB9 FPGAVPAARPPYPGAVYAGYAPPSLAAPPPVYYPAASP--GPCRVFGLVPERPLSPE--L
:: : :: : : :: :::: . : : : .:::: :
CCDS44 -PGRQP---PPAPPEQADGNAPG--PQPPPVRIQDIKTENGTCP----SPPQPLSPAAAL
200 210 220 230 240
240 250 260 270 280
pF1KB9 G-------PAPSGPGGSCAFASAGA--PATTTGYQPAGCTGAR----PANPSAYAAAYA-
: : .: .: . :.:. :.. . .: . :: : ::: ..
CCDS44 GSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQ
250 260 270 280 290 300
290 300 310 320 330
pF1KB9 --GPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGVETTVDFYGRTSPGQFGALGA-C
. :. . . :: ::: .: . :..: .:. . . : :::: . .. :
CCDS44 GFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLAL-GAYSPGQSSLYSSPC
310 320 330 340 350 360
340 350 360 370
pF1KB9 Y--NPGGQLGGASAGAYHARHAAAYPGGIDRFVSAM
. .:. ::...:: ::. :: .
CCDS44 SQTSSAGSSGGGGGGA----GAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGG
370 380 390 400 410 420
CCDS44 SAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWYLNQAGGD
430 440 450 460 470 480
>>CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 (416 aa)
initn: 566 init1: 544 opt: 617 Z-score: 348.5 bits: 73.3 E(32554): 4.3e-13
Smith-Waterman score: 617; 49.3% identity (67.0% similar) in 215 aa overlap (30-240:87-295)
10 20 30 40 50
pF1KB9 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYI
:. .: :.:.. . : : .:::::::
CCDS75 PGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDAR--QPAKPPYSYI
60 70 80 90 100 110
60 70 80 90 100 110
pF1KB9 ALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAG
:::.::: . :..::::.:: ::. :::.:: . :::::::::.:::::.::::: :
CCDS75 ALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPG
120 130 140 150 160 170
120 130 140 150 160 170
pF1KB9 RPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAA
.:::::::.::: ..:::..:::::::::::: .:. : :: :: .
CCDS75 HPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPG
180 190 200 210 220 230
180 190 200 210 220 230
pF1KB9 IFPGAVPAARPPYPGA---VYAGYAPPSLAAPPPVYYPAASPGPCRVFGLVPERPLSPEL
. :: :: : ::: . : : .: : :. : : ::.. .:.. . .:
CCDS75 PLLGA-PAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSA---RVYAGAPKKAEGADL
240 250 260 270 280 290
240 250 260 270 280 290
pF1KB9 G-PAPSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSA
. :::
CCDS75 ATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRG
300 310 320 330 340 350
>>CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 (416 aa)
initn: 576 init1: 544 opt: 612 Z-score: 345.8 bits: 72.8 E(32554): 6.1e-13
Smith-Waterman score: 614; 46.3% identity (64.1% similar) in 231 aa overlap (30-260:87-287)
10 20 30 40 50
pF1KB9 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYI
:. .: :.:.. . : : .:::::::
CCDS47 PGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDAR--QPAKPPYSYI
60 70 80 90 100 110
60 70 80 90 100 110
pF1KB9 ALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAG
:::.::: . :..::::.:: ::. :::.:: . :::::::::.:::::.::::: :
CCDS47 ALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPG
120 130 140 150 160 170
120 130 140 150 160 170
pF1KB9 RPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAA
.:::::::.::: ..:::..:::::::::::: .:. :
CCDS47 HPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFP--------------
180 190 200 210 220
180 190 200 210 220 230
pF1KB9 IFPGAVPAARPPYPGAVYAGYAPPSLAAPPPVYYPAASPGPCRVFGLVPERPLSPELGPA
.:.: : . :.:: . .. :::. : : :: ..:: : ..:. .:: : :
CCDS47 -LPAAHAALHNPHPGPLLGAPAPPQ---PVPGAYPNTAPGRCP-YALLHPHPLRYLLLSA
230 240 250 260 270
240 250 260 270 280 290
pF1KB9 PSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSAIFAA
: . :::: . :
CCDS47 P---------VYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSA
280 290 300 310 320
>>CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 (417 aa)
initn: 544 init1: 544 opt: 608 Z-score: 343.7 bits: 72.4 E(32554): 8e-13
Smith-Waterman score: 608; 49.3% identity (67.0% similar) in 215 aa overlap (30-240:87-295)
10 20 30 40 50
pF1KB9 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYI
:. .: :.:.. . : : .:::::::
CCDS43 PGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDAR--QPAKPPYSYI
60 70 80 90 100 110
60 70 80 90 100 110
pF1KB9 ALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAG
:::.::: . :..::::.:: ::. :::.:: . :::::::::.:::::.::::: :
CCDS43 ALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPG
120 130 140 150 160 170
120 130 140 150 160 170
pF1KB9 RPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAA
.:::::::.::: ..:::..:::::::::::: .:. : :: :: .
CCDS43 HPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPG
180 190 200 210 220 230
180 190 200 210 220 230
pF1KB9 IFPGAVPAARPPYPGA---VYAGYAPPSLAAPPPVYYPAASPGPCRVFGLVPERPLSPEL
. :: :: : ::: . : : .: : :. : : .: :.. .:.. . :
CCDS43 PLLGA-PAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLS-AP--VYAGAPKKAEGAAL
240 250 260 270 280 290
240 250 260 270 280 290
pF1KB9 G-PAPSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSA
. :::
CCDS43 ATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRG
300 310 320 330 340 350
373 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:36:48 2016 done: Fri Nov 4 17:36:49 2016
Total Scan time: 3.400 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]