Result of FASTA (ccds) for
pF1KB9485
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9485, 2063 aa
1>>>pF1KB9485 2063 - 2063 aa - 2063 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0544+/-0.00114; mu= 9.0463+/- 0.069
mean_var=198.7164+/-40.313, 0's: 0 Z-trim(109.0): 26 B-trim: 98 in 1/51
Lambda= 0.090982
statistics sampled from 10557 (10572) to 10557 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.325), width: 16
Scan time: 6.160
The best scores are: opt bits E(32554)
CCDS47812.1 PCM1 gene_id:5108|Hs108|chr8 (2024) 11472 1520.0 0
CCDS83256.1 PCM1 gene_id:5108|Hs108|chr8 (2016) 11398 1510.3 0
CCDS83255.1 PCM1 gene_id:5108|Hs108|chr8 (1860) 6881 917.4 0
>>CCDS47812.1 PCM1 gene_id:5108|Hs108|chr8 (2024 aa)
initn: 11472 init1: 11472 opt: 11472 Z-score: 8141.5 bits: 1520.0 E(32554): 0
Smith-Waterman score: 13097; 98.0% identity (98.1% similar) in 2063 aa overlap (1-2063:1-2024)
10 20 30 40 50 60
pF1KB9 MATGGGPFEDGMNDQDLPNWSNENVDDRLNNMDWGAQQKKANRSSEKNKKKFGVESDKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MATGGGPFEDGMNDQDLPNWSNENVDDRLNNMDWGAQQKKANRSSEKNKKKFGVESDKRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TNDISPESSPGVGRRRTKTPHTFPHSRYMSQMSVPEQAELEKLKQRINFSDLDQRSIGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TNDISPESSPGVGRRRTKTPHTFPHSRYMSQMSVPEQAELEKLKQRINFSDLDQRSIGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SQGRATAANNKRQLSENRKPFNFLPMQINTNKSKDASTSPPNRETIGSAQCKELFASALS
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS47 SQGRATAANNKRQLSENRKPFNFLPMQINTNKSKDASTNPPNRETIGSAQCKELFASALS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 NDLLQNCQVSEEDGRGEPAMESSQIVSRLVQIRDYITKASSMREDLVEKNERSANVERLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NDLLQNCQVSEEDGRGEPAMESSQIVSRLVQIRDYITKASSMREDLVEKNERSANVERLT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 HLIDHLKEQEKSYMKFLKKILARENEEEDVRTIDSAVGSGSVAESTSLNIDVQSEASDTT
:::::::::::::::::::::::
CCDS47 HLIDHLKEQEKSYMKFLKKILAR-------------------------------------
250 260
310 320 330 340 350 360
pF1KB9 ARDPQQEPMEEIENLKKQHDLLKRMLQQQEQLRALQGRQAALLALQHKAEQAIAVMDDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 --DPQQEPMEEIENLKKQHDLLKRMLQQQEQLRALQGRQAALLALQHKAEQAIAVMDDSV
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB9 VAETAGSLSGVSITSELNEELNDLIQRFHNQLRDSQPPAVPDNRRQAESLSLTREVSQSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VAETAGSLSGVSITSELNEELNDLIQRFHNQLRDSQPPAVPDNRRQAESLSLTREVSQSR
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB9 KPSASERLPDEKVELFSKMRVLQEKKQKMDKLLGELHTLRDQHLNNSSSSPQRSVDQRST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KPSASERLPDEKVELFSKMRVLQEKKQKMDKLLGELHTLRDQHLNNSSSSPQRSVDQRST
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB9 SAPSASVGLAPVVNGESNSLTSSVPYPTASLVSQNESENEGHLNPSEKLQKLNEVRKRLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SAPSASVGLAPVVNGESNSLTSSVPYPTASLVSQNESENEGHLNPSEKLQKLNEVRKRLN
450 460 470 480 490 500
550 560 570 580 590 600
pF1KB9 ELRELVHYYEQTSDMMTDAVNENRKDEETEESEYDSEHENSEPVTNIRNPQVASTWNEVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ELRELVHYYEQTSDMMTDAVNENRKDEETEESEYDSEHENSEPVTNIRNPQVASTWNEVN
510 520 530 540 550 560
610 620 630 640 650 660
pF1KB9 SHSNAQCVSNNRDGRTVNSNCEINNRSAANIRALNVPPSLDCRYNREGEQEIHVAQGEDD
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
CCDS47 SHSNAQCVSNNRDGRTVNSNCEINNRSAANIRALNMPPSLDCRYNREGEQEIHVAQGEDD
570 580 590 600 610 620
670 680 690 700 710 720
pF1KB9 EEEEEEAEEEGVSGASLSSHRSSLVDEHPEDAEFEQKINRLMAAKQKLRQLQDLVAMVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EEEEEEAEEEGVSGASLSSHRSSLVDEHPEDAEFEQKINRLMAAKQKLRQLQDLVAMVQD
630 640 650 660 670 680
730 740 750 760 770 780
pF1KB9 DDAAQGVISASASNLDDFYPAEEDTKQNSNNTRGNANKTQKDTGVNEKAREKFYEAKLQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DDAAQGVISASASNLDDFYPAEEDTKQNSNNTRGNANKTQKDTGVNEKAREKFYEAKLQQ
690 700 710 720 730 740
790 800 810 820 830 840
pF1KB9 QQRELKQLQEERKKLIDIQEKIQALQTACPDLQLSAASVGNCPTKKYMPAVTSTPTVNQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QQRELKQLQEERKKLIDIQEKIQALQTACPDLQLSAASVGNCPTKKYMPAVTSTPTVNQH
750 760 770 780 790 800
850 860 870 880 890 900
pF1KB9 ETSTSKSVFEPEDSSIVDNELWSEMRRHEMLREELRQRRKQLEALMAEHQRRQGLAETAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ETSTSKSVFEPEDSSIVDNELWSEMRRHEMLREELRQRRKQLEALMAEHQRRQGLAETAS
810 820 830 840 850 860
910 920 930 940 950 960
pF1KB9 PVAVSLRSDGSENLCTPQQSRTEKTMATWGGSTQCALDEEGDEDGYLSEGIVRTDEEEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PVAVSLRSDGSENLCTPQQSRTEKTMATWGGSTQCALDEEGDEDGYLSEGIVRTDEEEEE
870 880 890 900 910 920
970 980 990 1000 1010 1020
pF1KB9 EQDASSNDNFSVCPSNSVNHNSYNGKETKNRWKNNCPFSADENYRPLAKTRQQNISMQRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EQDASSNDNFSVCPSNSVNHNSYNGKETKNRWKNNCPFSADENYRPLAKTRQQNISMQRQ
930 940 950 960 970 980
1030 1040 1050 1060 1070 1080
pF1KB9 ENLRWVSELSYVEEKEQWQEQINQLKKQLDFSVSICQTLMQDQQTLSCLLQTLLTGPYSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ENLRWVSELSYVEEKEQWQEQINQLKKQLDFSVSICQTLMQDQQTLSCLLQTLLTGPYSV
990 1000 1010 1020 1030 1040
1090 1100 1110 1120 1130 1140
pF1KB9 MPSNVASPQVHFIMHQLNQCYTQLTWQQNNVQRLKQMLNELMRQQNQHPEKPGGKERGSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MPSNVASPQVHFIMHQLNQCYTQLTWQQNNVQRLKQMLNELMRQQNQHPEKPGGKERGSS
1050 1060 1070 1080 1090 1100
1150 1160 1170 1180 1190 1200
pF1KB9 ASHPPSPSLFCPFSFPTQPVNLFNIPGFTNFSSFAPGMNFSPLFPSNFGDFSQNISTPSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ASHPPSPSLFCPFSFPTQPVNLFNIPGFTNFSSFAPGMNFSPLFPSNFGDFSQNISTPSE
1110 1120 1130 1140 1150 1160
1210 1220 1230 1240 1250 1260
pF1KB9 QQQPLAQNSSGKTEYMAFPKPFESSSSIGAEKPRNKKLPEEEVESSRTPWLYEQEGEVEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QQQPLAQNSSGKTEYMAFPKPFESSSSIGAEKPRNKKLPEEEVESSRTPWLYEQEGEVEK
1170 1180 1190 1200 1210 1220
1270 1280 1290 1300 1310 1320
pF1KB9 PFIKTGFSVSVEKSTSSNRKNQLDTNGRRRQFDEESLESFSSMPDPVDPTTVTKTFKTRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PFIKTGFSVSVEKSTSSNRKNQLDTNGRRRQFDEESLESFSSMPDPVDPTTVTKTFKTRK
1230 1240 1250 1260 1270 1280
1330 1340 1350 1360 1370 1380
pF1KB9 ASAQASLASKDKTPKSKSKKRNSTQLKSRVKNIRYESASMSSTCEPCKSRNRHSAQTEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ASAQASLASKDKTPKSKSKKRNSTQLKSRVKNIRYESASMSSTCEPCKSRNRHSAQTEEP
1290 1300 1310 1320 1330 1340
1390 1400 1410 1420 1430 1440
pF1KB9 VQAKVFSRKNHEQLEKIIKCNRSTEISSETGSDFSMFEALRDTIYSEVATLISQNESRPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VQAKVFSRKNHEQLEKIIKCNRSTEISSETGSDFSMFEALRDTIYSEVATLISQNESRPH
1350 1360 1370 1380 1390 1400
1450 1460 1470 1480 1490 1500
pF1KB9 FLIELFHELQLLNTDYLRQRALYALQDIVSRHISESHEKGENVKSVNSGTWIASNSELTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FLIELFHELQLLNTDYLRQRALYALQDIVSRHISESHEKGENVKSVNSGTWIASNSELTP
1410 1420 1430 1440 1450 1460
1510 1520 1530 1540 1550 1560
pF1KB9 SESLATTDDETFEKNFERETHKISEQNDADNASVLSVSSNFEPFATDDLGNTVIHLDQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SESLATTDDETFEKNFERETHKISEQNDADNASVLSVSSNFEPFATDDLGNTVIHLDQAL
1470 1480 1490 1500 1510 1520
1570 1580 1590 1600 1610 1620
pF1KB9 ARMREYERMKTEAESNSNMRCTCRIIEDGDGAGAGTTVNNLEETPVIENRSSQQPVSEVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ARMREYERMKTEAESNSNMRCTCRIIEDGDGAGAGTTVNNLEETPVIENRSSQQPVSEVS
1530 1540 1550 1560 1570 1580
1630 1640 1650 1660 1670 1680
pF1KB9 TIPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDEVCSSQLLTSVRRMVLTLTQQNDESKEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TIPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDEVCSSQLLTSVRRMVLTLTQQNDESKEF
1590 1600 1610 1620 1630 1640
1690 1700 1710 1720 1730 1740
pF1KB9 VKFFHKQLGSILQDSLAKFAGRKLKDCGEDLLVEISEVLFNELAFFKLMQDLDNNSITVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VKFFHKQLGSILQDSLAKFAGRKLKDCGEDLLVEISEVLFNELAFFKLMQDLDNNSITVK
1650 1660 1670 1680 1690 1700
1750 1760 1770 1780 1790 1800
pF1KB9 QRCKRKIEATGVIQSCAKEAKRILEDHGSPAGEIDDEDKDKDETETVKQTQTSEVYDGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QRCKRKIEATGVIQSCAKEAKRILEDHGSPAGEIDDEDKDKDETETVKQTQTSEVYDGPK
1710 1720 1730 1740 1750 1760
1810 1820 1830 1840 1850 1860
pF1KB9 NVRSDISDQEEDEESEGCPVSINLSKAETQALTNYGSGEDENEDEEMEEFEEGPVDVQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NVRSDISDQEEDEESEGCPVSINLSKAETQALTNYGSGEDENEDEEMEEFEEGPVDVQTS
1770 1780 1790 1800 1810 1820
1870 1880 1890 1900 1910 1920
pF1KB9 LQANTEATEENEHDEQVLQRDFKKTAESKNVPLEREATSKNDQNNCPVKPCYLNILEDEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LQANTEATEENEHDEQVLQRDFKKTAESKNVPLEREATSKNDQNNCPVKPCYLNILEDEQ
1830 1840 1850 1860 1870 1880
1930 1940 1950 1960 1970 1980
pF1KB9 PLNSAAHKESPPTVDSTQQPNPLPLRLPEMEPLVPRVKEVKSAQETPESSLAGSPDTESP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PLNSAAHKESPPTVDSTQQPNPLPLRLPEMEPLVPRVKEVKSAQETPESSLAGSPDTESP
1890 1900 1910 1920 1930 1940
1990 2000 2010 2020 2030 2040
pF1KB9 VLVNDYEAESGNISQKSDEEDFVKVEDLPLKLTIYSEADLRKKMVEEEQKNHLSGEICEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VLVNDYEAESGNISQKSDEEDFVKVEDLPLKLTIYSEADLRKKMVEEEQKNHLSGEICEM
1950 1960 1970 1980 1990 2000
2050 2060
pF1KB9 QTEELAGNSETLKEPETVGAQSI
:::::::::::::::::::::::
CCDS47 QTEELAGNSETLKEPETVGAQSI
2010 2020
>>CCDS83256.1 PCM1 gene_id:5108|Hs108|chr8 (2016 aa)
initn: 8446 init1: 8446 opt: 11398 Z-score: 8089.1 bits: 1510.3 E(32554): 0
Smith-Waterman score: 13023; 97.6% identity (97.7% similar) in 2063 aa overlap (1-2063:1-2016)
10 20 30 40 50 60
pF1KB9 MATGGGPFEDGMNDQDLPNWSNENVDDRLNNMDWGAQQKKANRSSEKNKKKFGVESDKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MATGGGPFEDGMNDQDLPNWSNENVDDRLNNMDWGAQQKKANRSSEKNKKKFGVESDKRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TNDISPESSPGVGRRRTKTPHTFPHSRYMSQMSVPEQAELEKLKQRINFSDLDQRSIGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 TNDISPESSPGVGRRRTKTPHTFPHSRYMSQMSVPEQAELEKLKQRINFSDLDQRSIGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SQGRATAANNKRQLSENRKPFNFLPMQINTNKSKDASTSPPNRETIGSAQCKELFASALS
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS83 SQGRATAANNKRQLSENRKPFNFLPMQINTNKSKDASTNPPNRETIGSAQCKELFASALS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 NDLLQNCQVSEEDGRGEPAMESSQIVSRLVQIRDYITKASSMREDLVEKNERSANVERLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 NDLLQNCQVSEEDGRGEPAMESSQIVSRLVQIRDYITKASSMREDLVEKNERSANVERLT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 HLIDHLKEQEKSYMKFLKKILARENEEEDVRTIDSAVGSGSVAESTSLNIDVQSEASDTT
:::::::::::::::::::::::
CCDS83 HLIDHLKEQEKSYMKFLKKILAR-------------------------------------
250 260
310 320 330 340 350 360
pF1KB9 ARDPQQEPMEEIENLKKQHDLLKRMLQQQEQLRALQGRQAALLALQHKAEQAIAVMDDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 --DPQQEPMEEIENLKKQHDLLKRMLQQQEQLRALQGRQAALLALQHKAEQAIAVMDDSV
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB9 VAETAGSLSGVSITSELNEELNDLIQRFHNQLRDSQPPAVPDNRRQAESLSLTREVSQSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VAETAGSLSGVSITSELNEELNDLIQRFHNQLRDSQPPAVPDNRRQAESLSLTREVSQSR
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB9 KPSASERLPDEKVELFSKMRVLQEKKQKMDKLLGELHTLRDQHLNNSSSSPQRSVDQRST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KPSASERLPDEKVELFSKMRVLQEKKQKMDKLLGELHTLRDQHLNNSSSSPQRSVDQRST
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB9 SAPSASVGLAPVVNGESNSLTSSVPYPTASLVSQNESENEGHLNPSEKLQKLNEVRKRLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SAPSASVGLAPVVNGESNSLTSSVPYPTASLVSQNESENEGHLNPSEKLQKLNEVRKRLN
450 460 470 480 490 500
550 560 570 580 590 600
pF1KB9 ELRELVHYYEQTSDMMTDAVNENRKDEETEESEYDSEHENSEPVTNIRNPQVASTWNEVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 ELRELVHYYEQTSDMMTDAVNENRKDEETEESEYDSEHENSEPVTNIRNPQVASTWNEVN
510 520 530 540 550 560
610 620 630 640 650 660
pF1KB9 SHSNAQCVSNNRDGRTVNSNCEINNRSAANIRALNVPPSLDCRYNREGEQEIHVAQGEDD
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
CCDS83 SHSNAQCVSNNRDGRTVNSNCEINNRSAANIRALNMPPSLDCRYNREGEQEIHVAQGEDD
570 580 590 600 610 620
670 680 690 700 710 720
pF1KB9 EEEEEEAEEEGVSGASLSSHRSSLVDEHPEDAEFEQKINRLMAAKQKLRQLQDLVAMVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 EEEEEEAEEEGVSGASLSSHRSSLVDEHPEDAEFEQKINRLMAAKQKLRQLQDLVAMVQD
630 640 650 660 670 680
730 740 750 760 770 780
pF1KB9 DDAAQGVISASASNLDDFYPAEEDTKQNSNNTRGNANKTQKDTGVNEKAREKFYEAKLQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 DDAAQGVISASASNLDDFYPAEEDTKQNSNNTRGNANKTQKDTGVNEKAREKFYEAKLQQ
690 700 710 720 730 740
790 800 810 820 830 840
pF1KB9 QQRELKQLQEERKKLIDIQEKIQALQTACPDLQLSAASVGNCPTKKYMPAVTSTPTVNQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QQRELKQLQEERKKLIDIQEKIQALQTACPDLQLSAASVGNCPTKKYMPAVTSTPTVNQH
750 760 770 780 790 800
850 860 870 880 890 900
pF1KB9 ETSTSKSVFEPEDSSIVDNELWSEMRRHEMLREELRQRRKQLEALMAEHQRRQGLAETAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 ETSTSKSVFEPEDSSIVDNELWSEMRRHEMLREELRQRRKQLEALMAEHQRRQGLAETAS
810 820 830 840 850 860
910 920 930 940 950 960
pF1KB9 PVAVSLRSDGSENLCTPQQSRTEKTMATWGGSTQCALDEEGDEDGYLSEGIVRTDEEEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 PVAVSLRSDGSENLCTPQQSRTEKTMATWGGSTQCALDEEGDEDGYLSEGIVRTDEEEEE
870 880 890 900 910 920
970 980 990 1000 1010 1020
pF1KB9 EQDASSNDNFSVCPSNSVNHNSYNGKETKNRWKNNCPFSADENYRPLAKTRQQNISMQRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 EQDASSNDNFSVCPSNSVNHNSYNGKETKNRWKNNCPFSADENYRPLAKTRQQNISMQRQ
930 940 950 960 970 980
1030 1040 1050 1060 1070 1080
pF1KB9 ENLRWVSELSYVEEKEQWQEQINQLKKQLDFSVSICQTLMQDQQTLSCLLQTLLTGPYSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 ENLRWVSELSYVEEKEQWQEQINQLKKQLDFSVSICQTLMQDQQTLSCLLQTLLTGPYSV
990 1000 1010 1020 1030 1040
1090 1100 1110 1120 1130 1140
pF1KB9 MPSNVASPQVHFIMHQLNQCYTQLTWQQNNVQRLKQMLNELMRQQNQHPEKPGGKERGSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MPSNVASPQVHFIMHQLNQCYTQLTWQQNNVQRLKQMLNELMRQQNQHPEKPGGKERGSS
1050 1060 1070 1080 1090 1100
1150 1160 1170 1180 1190 1200
pF1KB9 ASHPPSPSLFCPFSFPTQPVNLFNIPGFTNFSSFAPGMNFSPLFPSNFGDFSQNISTPSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 ASHPPSPSLFCPFSFPTQPVNLFNIPGFTNFSSFAPGMNFSPLFPSNFGDFSQNISTPSE
1110 1120 1130 1140 1150 1160
1210 1220 1230 1240 1250 1260
pF1KB9 QQQPLAQNSSGKTEYMAFPKPFESSSSIGAEKPRNKKLPEEEVESSRTPWLYEQEGEVEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QQQPLAQNSSGKTEYMAFPKPFESSSSIGAEKPRNKKLPEEEVESSRTPWLYEQEGEVEK
1170 1180 1190 1200 1210 1220
1270 1280 1290 1300 1310 1320
pF1KB9 PFIKTGFSVSVEKSTSSNRKNQLDTNGRRRQFDEESLESFSSMPDPVDPTTVTKTFKTRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 PFIKTGFSVSVEKSTSSNRKNQLDTNGRRRQFDEESLESFSSMPDPVDPTTVTKTFKTRK
1230 1240 1250 1260 1270 1280
1330 1340 1350 1360 1370 1380
pF1KB9 ASAQASLASKDKTPKSKSKKRNSTQLKSRVKNIRYESASMSSTCEPCKSRNRHSAQTEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 ASAQASLASKDKTPKSKSKKRNSTQLKSRVKNIRYESASMSSTCEPCKSRNRHSAQTEEP
1290 1300 1310 1320 1330 1340
1390 1400 1410 1420 1430 1440
pF1KB9 VQAKVFSRKNHEQLEKIIKCNRSTEISSETGSDFSMFEALRDTIYSEVATLISQNESRPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VQAKVFSRKNHEQLEKIIKCNRSTEISSETGSDFSMFEALRDTIYSEVATLISQNESRPH
1350 1360 1370 1380 1390 1400
1450 1460 1470 1480 1490 1500
pF1KB9 FLIELFHELQLLNTDYLRQRALYALQDIVSRHISESHEKGENVKSVNSGTWIASNSELTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 FLIELFHELQLLNTDYLRQRALYALQDIVSRHISESHEKGENVKSVNSGTWIASNSELTP
1410 1420 1430 1440 1450 1460
1510 1520 1530 1540 1550 1560
pF1KB9 SESLATTDDETFEKNFERETHKISEQNDADNASVLSVSSNFEPFATDDLGNTVIHLDQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SESLATTDDETFEKNFERETHKISEQNDADNASVLSVSSNFEPFATDDLGNTVIHLDQAL
1470 1480 1490 1500 1510 1520
1570 1580 1590 1600 1610 1620
pF1KB9 ARMREYERMKTEAESNSNMRCTCRIIEDGDGAGAGTTVNNLEETPVIENRSSQQPVSEVS
:::::::::::::::::::::::::::::::::: ::::::::::::::::::
CCDS83 ARMREYERMKTEAESNSNMRCTCRIIEDGDGAGA--------ETPVIENRSSQQPVSEVS
1530 1540 1550 1560 1570
1630 1640 1650 1660 1670 1680
pF1KB9 TIPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDEVCSSQLLTSVRRMVLTLTQQNDESKEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 TIPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDEVCSSQLLTSVRRMVLTLTQQNDESKEF
1580 1590 1600 1610 1620 1630
1690 1700 1710 1720 1730 1740
pF1KB9 VKFFHKQLGSILQDSLAKFAGRKLKDCGEDLLVEISEVLFNELAFFKLMQDLDNNSITVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VKFFHKQLGSILQDSLAKFAGRKLKDCGEDLLVEISEVLFNELAFFKLMQDLDNNSITVK
1640 1650 1660 1670 1680 1690
1750 1760 1770 1780 1790 1800
pF1KB9 QRCKRKIEATGVIQSCAKEAKRILEDHGSPAGEIDDEDKDKDETETVKQTQTSEVYDGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QRCKRKIEATGVIQSCAKEAKRILEDHGSPAGEIDDEDKDKDETETVKQTQTSEVYDGPK
1700 1710 1720 1730 1740 1750
1810 1820 1830 1840 1850 1860
pF1KB9 NVRSDISDQEEDEESEGCPVSINLSKAETQALTNYGSGEDENEDEEMEEFEEGPVDVQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 NVRSDISDQEEDEESEGCPVSINLSKAETQALTNYGSGEDENEDEEMEEFEEGPVDVQTS
1760 1770 1780 1790 1800 1810
1870 1880 1890 1900 1910 1920
pF1KB9 LQANTEATEENEHDEQVLQRDFKKTAESKNVPLEREATSKNDQNNCPVKPCYLNILEDEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 LQANTEATEENEHDEQVLQRDFKKTAESKNVPLEREATSKNDQNNCPVKPCYLNILEDEQ
1820 1830 1840 1850 1860 1870
1930 1940 1950 1960 1970 1980
pF1KB9 PLNSAAHKESPPTVDSTQQPNPLPLRLPEMEPLVPRVKEVKSAQETPESSLAGSPDTESP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 PLNSAAHKESPPTVDSTQQPNPLPLRLPEMEPLVPRVKEVKSAQETPESSLAGSPDTESP
1880 1890 1900 1910 1920 1930
1990 2000 2010 2020 2030 2040
pF1KB9 VLVNDYEAESGNISQKSDEEDFVKVEDLPLKLTIYSEADLRKKMVEEEQKNHLSGEICEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VLVNDYEAESGNISQKSDEEDFVKVEDLPLKLTIYSEADLRKKMVEEEQKNHLSGEICEM
1940 1950 1960 1970 1980 1990
2050 2060
pF1KB9 QTEELAGNSETLKEPETVGAQSI
:::::::::::::::::::::::
CCDS83 QTEELAGNSETLKEPETVGAQSI
2000 2010
>>CCDS83255.1 PCM1 gene_id:5108|Hs108|chr8 (1860 aa)
initn: 6961 init1: 4723 opt: 6881 Z-score: 4885.3 bits: 917.4 E(32554): 0
Smith-Waterman score: 11637; 89.9% identity (90.1% similar) in 2064 aa overlap (1-2063:1-1860)
10 20 30 40 50 60
pF1KB9 MATGGGPFEDGMNDQDLPNWSNENVDDRLNNMDWGAQQKKANRSSEKNKKKFGVESDKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MATGGGPFEDGMNDQDLPNWSNENVDDRLNNMDWGAQQKKANRSSEKNKKKFGVESDKRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TNDISPESSPGVGRRRTKTPHTFPHSRYMSQMSVPEQAELEKLKQRINFSDLDQRSIGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 TNDISPESSPGVGRRRTKTPHTFPHSRYMSQMSVPEQAELEKLKQRINFSDLDQRSIGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SQGRATAANNKRQLSENRKPFNFLPMQINTNKSKDASTSPPNRETIGSAQCKELFASALS
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS83 SQGRATAANNKRQLSENRKPFNFLPMQINTNKSKDASTNPPNRETIGSAQCKELFASALS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 NDLLQNCQVSEEDGRGEPAMESSQIVSRLVQIRDYITKASSMREDLVEKNERSANVERLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 NDLLQNCQVSEEDGRGEPAMESSQIVSRLVQIRDYITKASSMREDLVEKNERSANVERLT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 HLIDHLKEQEKSYMKFLKKILARENEEEDVRTIDSAVGSGSVAESTSLNIDVQSEASDTT
:::::::::::::::::::::::
CCDS83 HLIDHLKEQEKSYMKFLKKILAR-------------------------------------
250 260
310 320 330 340 350 360
pF1KB9 ARDPQQEPMEEIENLKKQHDLLKRMLQQQEQLRALQGRQAALLALQHKAEQAIAVMDDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 --DPQQEPMEEIENLKKQHDLLKRMLQQQEQLRALQGRQAALLALQHKAEQAIAVMDDSV
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB9 VAETAGSLSGVSITSELNEELNDLIQRFHNQLRDSQPPAVPDNRRQAESLSLTREVSQSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VAETAGSLSGVSITSELNEELNDLIQRFHNQLRDSQPPAVPDNRRQAESLSLTREVSQSR
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB9 KPSASERLPDEKVELFSKMRVLQEKKQKMDKLLGELHTLRDQHLNNSSSSPQRSVDQRST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KPSASERLPDEKVELFSKMRVLQEKKQKMDKLLGELHTLRDQHLNNSSSSPQRSVDQRST
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB9 SAPSASVGLAPVVNGESNSLTSSVPYPTASLVSQNESENEGHLNPSEKLQKLNEVRKRLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SAPSASVGLAPVVNGESNSLTSSVPYPTASLVSQNESENEGHLNPSEKLQKLNEVRKRLN
450 460 470 480 490 500
550 560 570 580 590 600
pF1KB9 ELRELVHYYEQTSDMMTDAVNENRKDEETEESEYDSEHENSEPVTNIRNPQVASTWNEVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 ELRELVHYYEQTSDMMTDAVNENRKDEETEESEYDSEHENSEPVTNIRNPQVASTWNEVN
510 520 530 540 550 560
610 620 630 640 650
pF1KB9 SHSNAQCVSNNRDGRTVNSNCEINNRSAANIRALNVPPSL-DCRYNREGEQEIHVAQGED
:::::::::::::::::::::::::::::::::::.:::: :::::::::::::::::::
CCDS83 SHSNAQCVSNNRDGRTVNSNCEINNRSAANIRALNMPPSLADCRYNREGEQEIHVAQGED
570 580 590 600 610 620
660 670 680 690 700 710
pF1KB9 DEEEEEEAEEEGVSGASLSSHRSSLVDEHPEDAEFEQKINRLMAAKQKLRQLQDLVAMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 DEEEEEEAEEEGVSGASLSSHRSSLVDEHPEDAEFEQKINRLMAAKQKLRQLQDLVAMVQ
630 640 650 660 670 680
720 730 740 750 760 770
pF1KB9 DDDAAQGVISASASNLDDFYPAEEDTKQNSNNTRGNANKTQKDTGVNEKAREKFYEAKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 DDDAAQGVISASASNLDDFYPAEEDTKQNSNNTRGNANKTQKDTGVNEKAREKFYEAKLQ
690 700 710 720 730 740
780 790 800 810 820 830
pF1KB9 QQQRELKQLQEERKKLIDIQEKIQALQTACPDLQLSAASVGNCPTKKYMPAVTSTPTVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QQQRELKQLQEERKKLIDIQEKIQALQTACPDLQLSAASVGNCPTKKYMPAVTSTPTVNQ
750 760 770 780 790 800
840 850 860 870 880 890
pF1KB9 HETSTSKSVFEPEDSSIVDNELWSEMRRHEMLREELRQRRKQLEALMAEHQRRQGLAETA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 HETSTSKSVFEPEDSSIVDNELWSEMRRHEMLREELRQRRKQLEALMAEHQRRQGLAETA
810 820 830 840 850 860
900 910 920 930 940 950
pF1KB9 SPVAVSLRSDGSENLCTPQQSRTEKTMATWGGSTQCALDEEGDEDGYLSEGIVRTDEEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SPVAVSLRSDGSENLCTPQQSRTEKTMATWGGSTQCALDEEGDEDGYLSEGIVRTDEEEE
870 880 890 900 910 920
960 970 980 990 1000 1010
pF1KB9 EEQDASSNDNFSVCPSNSVNHNSYNGKETKNRWKNNCPFSADENYRPLAKTRQQNISMQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 EEQDASSNDNFSVCPSNSVNHNSYNGKETKNRWKNNCPFSADENYRPLAKTRQQNISMQR
930 940 950 960 970 980
1020 1030 1040 1050 1060 1070
pF1KB9 QENLRWVSELSYVEEKEQWQEQINQLKKQLDFSVSICQTLMQDQQTLSCLLQTLLTGPYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QENLRWVSELSYVEEKEQWQEQINQLKKQLDFSVSICQTLMQDQQTLSCLLQTLLTGPYS
990 1000 1010 1020 1030 1040
1080 1090 1100 1110 1120 1130
pF1KB9 VMPSNVASPQVHFIMHQLNQCYTQLTWQQNNVQRLKQMLNELMRQQNQHPEKPGGKERGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VMPSNVASPQVHFIMHQLNQCYTQLTWQQNNVQRLKQMLNELMRQQNQHPEKPGGKERGS
1050 1060 1070 1080 1090 1100
1140 1150 1160 1170 1180 1190
pF1KB9 SASHPPSPSLFCPFSFPTQPVNLFNIPGFTNFSSFAPGMNFSPLFPSNFGDFSQNISTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SASHPPSPSLFCPFSFPTQPVNLFNIPGFTNFSSFAPGMNFSPLFPSNFGDFSQNISTPS
1110 1120 1130 1140 1150 1160
1200 1210 1220 1230 1240 1250
pF1KB9 EQQQPLAQNSSGKTEYMAFPKPFESSSSIGAEKPRNKKLPEEEVESSRTPWLYEQEGEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 EQQQPLAQNSSGKTEYMAFPKPFESSSSIGAEKPRNKKLPEEEVESSRTPWLYEQEGEVE
1170 1180 1190 1200 1210 1220
1260 1270 1280 1290 1300 1310
pF1KB9 KPFIKTGFSVSVEKSTSSNRKNQLDTNGRRRQFDEESLESFSSMPDPVDPTTVTKTFKTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KPFIKTGFSVSVEKSTSSNRKNQLDTNGRRRQFDEESLESFSSMPDPVDPTTVTKTFKTR
1230 1240 1250 1260 1270 1280
1320 1330 1340 1350 1360 1370
pF1KB9 KASAQASLASKDKTPKSKSKKRNSTQLKSRVKNIRYESASMSSTCEPCKSRNRHSAQTEE
::::::::::::::::::::::::::::::::::.
CCDS83 KASAQASLASKDKTPKSKSKKRNSTQLKSRVKNIK-------------------------
1290 1300 1310
1380 1390 1400 1410 1420 1430
pF1KB9 PVQAKVFSRKNHEQLEKIIKCNRSTEISSETGSDFSMFEALRDTIYSEVATLISQNESRP
::::::::::::::::::::::::::::::
CCDS83 ------------------------------TGSDFSMFEALRDTIYSEVATLISQNESRP
1320 1330 1340
1440 1450 1460 1470 1480 1490
pF1KB9 HFLIELFHELQLLNTDYLRQRALYALQDIVSRHISESHEKGENVKSVNSGTWIASNSELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 HFLIELFHELQLLNTDYLRQRALYALQDIVSRHISESHEKGENVKSVNSGTWIASNSELT
1350 1360 1370 1380 1390 1400
1500 1510 1520 1530 1540 1550
pF1KB9 PSESLATTDDETFEKNFERETHKISEQNDADNASVLSVSSNFEPFATDDLGNTVIHLDQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 PSESLATTDDETFEKNFERETHKISEQNDADNASVLSVSSNFEPFATDDLGNTVIHLDQA
1410 1420 1430 1440 1450 1460
1560 1570 1580 1590 1600 1610
pF1KB9 LARMREYERMKTEAESNSNMRCTCRIIEDGDGAGAGTTVNNLEETPVIENRSSQQPVSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 LARMREYERMKTEAESNSNMRCTCRIIEDGDGAGAGTTVNNLEETPVIENRSSQQPVSEV
1470 1480 1490 1500 1510 1520
1620 1630 1640 1650 1660 1670
pF1KB9 STIPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDEVCSSQLLTSVRRMVLTLTQQNDESKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 STIPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDEVCSSQLLTSVRRMVLTLTQQNDESKE
1530 1540 1550 1560 1570 1580
1680 1690 1700 1710 1720 1730
pF1KB9 FVKFFHKQLGSILQDSLAKFAGRKLKDCGEDLLVEISEVLFNELAFFKLMQDLDNNSITV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 FVKFFHKQLGSILQDSLAKFAGRKLKDCGEDLLVEISEVLFNELAFFKLMQDLDNNSITV
1590 1600 1610 1620 1630 1640
1740 1750 1760 1770 1780 1790
pF1KB9 KQRCKRKIEATGVIQSCAKEAKRILEDHGSPAGEIDDEDKDKDETETVKQTQTSEVYDGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KQRCKRKIEATGVIQSCAKEAKRILEDHGSPAGEIDDEDKDKDETETVKQTQTSEVYDGP
1650 1660 1670 1680 1690 1700
1800 1810 1820 1830 1840 1850
pF1KB9 KNVRSDISDQEEDEESEGCPVSINLSKAETQALTNYGSGEDENEDEEMEEFEEGPVDVQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KNVRSDISDQEEDEESEGCPVSINLSKAETQALTNYGSGEDENEDEEMEEFEEGPVDVQT
1710 1720 1730 1740 1750 1760
1860 1870 1880 1890 1900 1910
pF1KB9 SLQANTEATEENEHDEQVLQRDFKKTAESKNVPLEREATSKNDQNNCPVKPCYLNILEDE
:::::::::::::::::
CCDS83 SLQANTEATEENEHDEQ-------------------------------------------
1770 1780
1920 1930 1940 1950 1960 1970
pF1KB9 QPLNSAAHKESPPTVDSTQQPNPLPLRLPEMEPLVPRVKEVKSAQETPESSLAGSPDTES
CCDS83 ------------------------------------------------------------
1980 1990 2000 2010 2020 2030
pF1KB9 PVLVNDYEAESGNISQKSDEEDFVKVEDLPLKLTIYSEADLRKKMVEEEQKNHLSGEICE
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 -------EAESGNISQKSDEEDFVKVEDLPLKLTIYSEADLRKKMVEEEQKNHLSGEICE
1790 1800 1810 1820 1830
2040 2050 2060
pF1KB9 MQTEELAGNSETLKEPETVGAQSI
::::::::::::::::::::::::
CCDS83 MQTEELAGNSETLKEPETVGAQSI
1840 1850 1860
2063 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:23:46 2016 done: Sat Nov 5 21:23:48 2016
Total Scan time: 6.160 Total Display time: 0.590
Function used was FASTA [36.3.4 Apr, 2011]