Result of FASTA (ccds) for
pF1KB9414
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9414, 713 aa
1>>>pF1KB9414 713 - 713 aa - 713 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2219+/-0.00091; mu= 4.2167+/- 0.055
mean_var=237.8905+/-48.350, 0's: 0 Z-trim(114.4): 13 B-trim: 0 in 0/51
Lambda= 0.083154
statistics sampled from 14982 (14992) to 14982 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.771), E-opt: 0.2 (0.461), width: 16
Scan time: 2.840
The best scores are: opt bits E(32554)
CCDS55165.1 CNOT4 gene_id:4850|Hs108|chr7 ( 713) 4901 601.1 1.9e-171
CCDS55167.1 CNOT4 gene_id:4850|Hs108|chr7 ( 710) 4859 596.0 6.1e-170
CCDS55164.1 CNOT4 gene_id:4850|Hs108|chr7 ( 642) 3773 465.7 9.4e-131
CCDS43650.1 CNOT4 gene_id:4850|Hs108|chr7 ( 639) 3731 460.7 3.1e-129
CCDS55166.1 CNOT4 gene_id:4850|Hs108|chr7 ( 575) 3708 457.9 1.9e-128
CCDS47719.1 CNOT4 gene_id:4850|Hs108|chr7 ( 572) 3666 452.9 6.3e-127
>>CCDS55165.1 CNOT4 gene_id:4850|Hs108|chr7 (713 aa)
initn: 4901 init1: 4901 opt: 4901 Z-score: 3191.6 bits: 601.1 E(32554): 1.9e-171
Smith-Waterman score: 4901; 100.0% identity (100.0% similar) in 713 aa overlap (1-713:1-713)
10 20 30 40 50 60
pF1KB9 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 VADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSW
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 DSPGSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DSPGSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
610 620 630 640 650 660
670 680 690 700 710
pF1KB9 STQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 STQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
670 680 690 700 710
>>CCDS55167.1 CNOT4 gene_id:4850|Hs108|chr7 (710 aa)
initn: 4861 init1: 3025 opt: 4859 Z-score: 3164.4 bits: 596.0 E(32554): 6.1e-170
Smith-Waterman score: 4859; 99.4% identity (99.6% similar) in 713 aa overlap (1-713:1-710)
10 20 30 40 50 60
pF1KB9 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
:::::::::::::::::::::::::::::: .::::::::::::::::::::::::::
CCDS55 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQ---SPIDKPSDSLSIGNGDNSQQISNSDTP
250 260 270 280 290
310 320 330 340 350 360
pF1KB9 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB9 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB9 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB9 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB9 VADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSW
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB9 DSPGSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DSPGSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
600 610 620 630 640 650
670 680 690 700 710
pF1KB9 STQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 STQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
660 670 680 690 700 710
>>CCDS55164.1 CNOT4 gene_id:4850|Hs108|chr7 (642 aa)
initn: 3743 init1: 3743 opt: 3773 Z-score: 2460.9 bits: 465.7 E(32554): 9.4e-131
Smith-Waterman score: 4272; 90.0% identity (90.0% similar) in 713 aa overlap (1-713:1-642)
10 20 30 40 50 60
pF1KB9 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 VADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSW
::
CCDS55 VA----------------------------------------------------------
610 620 630 640 650 660
pF1KB9 DSPGSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 -------------GIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
550 560 570 580
670 680 690 700 710
pF1KB9 STQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 STQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
590 600 610 620 630 640
>>CCDS43650.1 CNOT4 gene_id:4850|Hs108|chr7 (639 aa)
initn: 3701 init1: 1865 opt: 3731 Z-score: 2433.7 bits: 460.7 E(32554): 3.1e-129
Smith-Waterman score: 4230; 89.5% identity (89.6% similar) in 713 aa overlap (1-713:1-639)
10 20 30 40 50 60
pF1KB9 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
:::::::::::::::::::::::::::::: .::::::::::::::::::::::::::
CCDS43 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQ---SPIDKPSDSLSIGNGDNSQQISNSDTP
250 260 270 280 290
310 320 330 340 350 360
pF1KB9 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB9 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB9 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB9 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB9 VADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSW
::
CCDS43 VA----------------------------------------------------------
610 620 630 640 650 660
pF1KB9 DSPGSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 -------------GIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
540 550 560 570 580
670 680 690 700 710
pF1KB9 STQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 STQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
590 600 610 620 630
>>CCDS55166.1 CNOT4 gene_id:4850|Hs108|chr7 (575 aa)
initn: 3708 init1: 3708 opt: 3708 Z-score: 2419.4 bits: 457.9 E(32554): 1.9e-128
Smith-Waterman score: 3708; 100.0% identity (100.0% similar) in 542 aa overlap (1-542:1-542)
10 20 30 40 50 60
pF1KB9 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 VADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSW
::
CCDS55 VAGEEEVKVSTMPLSTSSHSLQQGQQPTSLHTTVA
550 560 570
>>CCDS47719.1 CNOT4 gene_id:4850|Hs108|chr7 (572 aa)
initn: 3668 init1: 1850 opt: 3666 Z-score: 2392.2 bits: 452.9 E(32554): 6.3e-127
Smith-Waterman score: 3666; 99.3% identity (99.4% similar) in 542 aa overlap (1-542:1-539)
10 20 30 40 50 60
pF1KB9 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
:::::::::::::::::::::::::::::: .::::::::::::::::::::::::::
CCDS47 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQ---SPIDKPSDSLSIGNGDNSQQISNSDTP
250 260 270 280 290
310 320 330 340 350 360
pF1KB9 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB9 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB9 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB9 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB9 VADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSW
::
CCDS47 VAGEEEVKVSTMPLSTSSHSLQQGQQPTSLHTTVA
540 550 560 570
713 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 23:14:13 2016 done: Thu Nov 3 23:14:13 2016
Total Scan time: 2.840 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]