Result of FASTA (ccds) for
pF1KB9185
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9185, 376 aa
1>>>pF1KB9185 376 - 376 aa - 376 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1646+/-0.000968; mu= 17.2183+/- 0.058
mean_var=62.5109+/-12.661, 0's: 0 Z-trim(104.1): 14 B-trim: 0 in 0/49
Lambda= 0.162217
statistics sampled from 7719 (7725) to 7719 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.237), width: 16
Scan time: 2.610
The best scores are: opt bits E(32554)
CCDS13703.1 AGPAT3 gene_id:56894|Hs108|chr21 ( 376) 2553 606.3 1.4e-173
CCDS5280.1 AGPAT4 gene_id:56895|Hs108|chr6 ( 378) 1661 397.5 9.8e-111
CCDS42670.1 LCLAT1 gene_id:253558|Hs108|chr2 ( 376) 386 99.2 6.5e-21
CCDS1772.1 LCLAT1 gene_id:253558|Hs108|chr2 ( 414) 386 99.2 7.1e-21
CCDS34796.1 AGPAT5 gene_id:55326|Hs108|chr8 ( 364) 307 80.7 2.3e-15
>>CCDS13703.1 AGPAT3 gene_id:56894|Hs108|chr21 (376 aa)
initn: 2553 init1: 2553 opt: 2553 Z-score: 3229.7 bits: 606.3 E(32554): 1.4e-173
Smith-Waterman score: 2553; 100.0% identity (100.0% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KB9 MGLLAFLKTQFVLHLLVGFVFVVSGLVINFVQLCTLALWPVSKQLYRRLNCRLAYSLWSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MGLLAFLKTQFVLHLLVGFVFVVSGLVINFVQLCTLALWPVSKQLYRRLNCRLAYSLWSQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNFRGNKNPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNFRGNKNPSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LGILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLYQEKDALQEIYNQKGMFPGEQFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LGILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLYQEKDALQEIYNQKGMFPGEQFK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PARRPWTLLNFLSWATILLSPLFSFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PARRPWTLLNFLSWATILLSPLFSFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTE
310 320 330 340 350 360
370
pF1KB9 IEKGSSYGNQEFKKKE
::::::::::::::::
CCDS13 IEKGSSYGNQEFKKKE
370
>>CCDS5280.1 AGPAT4 gene_id:56895|Hs108|chr6 (378 aa)
initn: 1700 init1: 1651 opt: 1661 Z-score: 2101.5 bits: 397.5 E(32554): 9.8e-111
Smith-Waterman score: 1661; 61.9% identity (84.8% similar) in 375 aa overlap (1-375:1-375)
10 20 30 40 50 60
pF1KB9 MGLLAFLKTQFVLHLLVGFVFVVSGLVINFVQLCTLALWPVSKQLYRRLNCRLAYSLWSQ
: : ..::.::. ::. .::..:::.:: .:: :: :::..:::.:..::::.: . ::
CCDS52 MDLAGLLKSQFLCHLVFCYVFIASGLIINTIQLFTLLLWPINKQLFRKINCRLSYCISSQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKV
::::::::: ::::.::: . ..:::.:...:::.:::::::::.. ::::.::.:::
CCDS52 LVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRF
:::::: :::.::: ::: :.:::.::::.:: ::. .:..: :::: ..::..::::::
CCDS52 LAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNFRGNKNPSL
:: ::..::.:: ::::: ::.:::::::::. .:. ::..:.:::: :::::.:.::.:
CCDS52 TEKKHEISMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNFRNNENPTL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LGILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLYQEKDALQEIYNQKGMFPGEQFK
::.: ::::.::. :::.:::::: :. : . :::::::::::.:: : . : :: .
CCDS52 LGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYYRTGTFPETPMV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PARRPWTLLNFLSWATILLSPLFSFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTE
: ::::::.:.: ::...: :.:.:..... ::: : . .:. .:: ::: .:::::
CCDS52 PPRRPWTLVNWLFWASLVLYPFFQFLVSMIRSGSSLTLASFILVFFVASVGVRWMIGVTE
310 320 330 340 350 360
370
pF1KB9 IEKGSSYGNQEFKKKE
:.:::.:::.. :.:
CCDS52 IDKGSAYGNSDSKQKLND
370
>>CCDS42670.1 LCLAT1 gene_id:253558|Hs108|chr2 (376 aa)
initn: 316 init1: 256 opt: 386 Z-score: 488.9 bits: 99.2 E(32554): 6.5e-21
Smith-Waterman score: 408; 30.5% identity (57.2% similar) in 348 aa overlap (11-345:9-344)
10 20 30 40 50 60
pF1KB9 MGLLAFLKTQFVLHLLVGFVFVVSGLVINFVQLCTLALWPVSKQLYRRLNCRLAYSLWSQ
:.: :. : : : . :. : : :. . :: .: ::. . :
CCDS42 MVSWKGIYFILTLFWGSFF---GSI--FMLSPFLPLMFVNPSWYRWINNRLVAT-WLT
10 20 30 40 50
70 80 90 100 110
pF1KB9 L-VMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSK
: : ::: .. ...: .: : : :..:::.:: ..:.. :. :.. : :
CCDS42 LPVALLETMFGVK-VIITGDAFVP--G-ERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEK
60 70 80 90 100
120 130 140 150 160 170
pF1KB9 VLAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTR
. : : :: .::. .: .:::..:.. . . . : : . .:.. :::
CCDS42 ICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTD
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB9 FTETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAVKCLR-G-TVAAVYDVTLNFRGNKN
.::... : : .:: .: : ::: ::: .: :: : .. ::.:.:. . :
CCDS42 LTENSKSRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPHNIP
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB9 PSLLGILYGK-KYEADMCVRRFPLEDIPLDEKEAAQWLHKLYQEKDA-LQEIYN-QKGM-
: .: : : . :.:.:.. .: .... : :: ..::. :. .:. .:..
CCDS42 QSEKHLLQGDFPREIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFY
230 240 250 260 270 280
300 310 320 330 340
pF1KB9 FPGEQFKPARRPWT------LLNFLSWATILLSPLFSFVLGVFASGSPLLILTFLGFVGA
: :.. : . ::..: :. :.:: . ... ... . .:.:.. ::
CCDS42 FTGQSVIPPCKSELRVLVVKLLSILYWT--LFSPAMCLLIYLYSLVKWYFIITIVIFVLQ
290 300 310 320 330 340
350 360 370
pF1KB9 ASFGVRRLIGVTEIEKGSSYGNQEFKKKE
CCDS42 ERIFGGLEIIELACYRLLHKQPHLNSKKNE
350 360 370
>>CCDS1772.1 LCLAT1 gene_id:253558|Hs108|chr2 (414 aa)
initn: 316 init1: 256 opt: 386 Z-score: 488.3 bits: 99.2 E(32554): 7.1e-21
Smith-Waterman score: 408; 30.5% identity (57.2% similar) in 348 aa overlap (11-345:47-382)
10 20 30 40
pF1KB9 MGLLAFLKTQFVLHLLVGFVFVVSGLVINFVQLCTLALWP
:.: :. : : : . :. : :
CCDS17 INEAVSSYCTYFIKQDSKSFGIMVSWKGIYFILTLFWGSFF---GSI--FMLSPFLPLMF
20 30 40 50 60 70
50 60 70 80 90
pF1KB9 VSKQLYRRLNCRLAYSLWSQL-VMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFE
:. . :: .: ::. . : : : ::: .. ...: .: : : :..:::.:: .
CCDS17 VNPSWYRWINNRLVAT-WLTLPVALLETMFGVK-VIITGDAFVP--G-ERSVIIMNHRTR
80 90 100 110 120
100 110 120 130 140 150
pF1KB9 IDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGL
.:.. :. :.. : :. : : :: .::. .: .:::..:.. . .
CCDS17 MDWMFLWNCLMRYSYLRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB9 RRLSDYPEYMWFLLYCEGTRFTETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAVKCLR
. : : . .:.. ::: .::... : : .:: .: : ::: ::: .: ::
CCDS17 DYFCDIHEPLQLLIFPEGTDLTENSKSRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRLR
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB9 -G-TVAAVYDVTLNFRGNKNPSLLGILYGK-KYEADMCVRRFPLEDIPLDEKEAAQWLHK
: .. ::.:.:. . : : .: : : . :.:.:.. .: .... : ::
CCDS17 EGKNLDAVHDITVAYPHNIPQSEKHLLQGDFPREIHFHVHRYPIDTLPTSKEDLQLWCHK
250 260 270 280 290 300
280 290 300 310 320
pF1KB9 LYQEKDA-LQEIYN-QKGM-FPGEQFKPARRPWT------LLNFLSWATILLSPLFSFVL
..::. :. .:. .:.. : :.. : . ::..: :. :.:: . ...
CCDS17 RWEEKEERLRSFYQGEKNFYFTGQSVIPPCKSELRVLVVKLLSILYWT--LFSPAMCLLI
310 320 330 340 350 360
330 340 350 360 370
pF1KB9 GVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQEFKKKE
... . .:.:.. ::
CCDS17 YLYSLVKWYFIITIVIFVLQERIFGGLEIIELACYRLLHKQPHLNSKKNE
370 380 390 400 410
>>CCDS34796.1 AGPAT5 gene_id:55326|Hs108|chr8 (364 aa)
initn: 265 init1: 128 opt: 307 Z-score: 389.2 bits: 80.7 E(32554): 2.3e-15
Smith-Waterman score: 314; 25.4% identity (58.5% similar) in 272 aa overlap (44-297:45-310)
20 30 40 50 60 70
pF1KB9 HLLVGFVFVVSGLVINFVQLCTLALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTEC
..:. :. :: :......: .. ..
CCDS34 LLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRLYCVYQSMVLFFFENYTGVQI
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB9 TLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIG
:. : .::. . . ::. .:.. . . : ..:: . . :. : ..:: :
CCDS34 LLYGDLPK----NKENIIYLANHQSTVDWIVADILAIRQNALGHVRYVLKEGLKWLPLYG
80 90 100 110 120 130
140 150 160 170 180
pF1KB9 WTWYFLEI--VFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRFTETKHRV---S
:: . .. ::. . .. . . :. : :..... ::::.. . .: :
CCDS34 C--YFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPEGTRYNPEQTKVLSAS
140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNFRGN-------KNPSLL
. :: .:: :::. : :: :. .: :... . :.::::. ..:. ..:..
CCDS34 QAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYEGKDDGGQRRESPTMT
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 GILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLYQEKDA-LQEIYN-----QKGMFP
.: . . . . :. .:.: .... .:::. .. :: : :.:. .. ::
CCDS34 EFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLIEFYESPDPERRKRFP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 GEQFKPARRPWTLLNFLSWATILLSPLFSFVLGVFASGSPLLILTFLGFVGAASFGVRRL
:.
CCDS34 GKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTWIYGTLLGCLWVTIKA
310 320 330 340 350 360
376 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:40:49 2016 done: Sat Nov 5 19:40:50 2016
Total Scan time: 2.610 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]