Result of FASTA (ccds) for
pF1KB8882
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8882, 182 aa
1>>>pF1KB8882 182 - 182 aa - 182 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9195+/-0.000546; mu= 15.3586+/- 0.033
mean_var=61.0611+/-12.268, 0's: 0 Z-trim(113.0): 16 B-trim: 10 in 1/50
Lambda= 0.164131
statistics sampled from 13638 (13654) to 13638 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.419), width: 16
Scan time: 2.070
The best scores are: opt bits E(32554)
CCDS8352.1 HSPB2 gene_id:3316|Hs108|chr11 ( 182) 1230 298.7 1.3e-81
CCDS8351.1 CRYAB gene_id:1410|Hs108|chr11 ( 175) 381 97.6 4.3e-21
CCDS12475.1 HSPB6 gene_id:126393|Hs108|chr19 ( 160) 349 90.0 7.6e-19
CCDS82651.1 LOC102724652 gene_id:102724652|Hs108|c ( 173) 324 84.1 4.9e-17
CCDS13695.1 CRYAA gene_id:1409|Hs108|chr21 ( 173) 324 84.1 4.9e-17
CCDS5583.1 HSPB1 gene_id:3315|Hs108|chr7 ( 205) 309 80.6 6.6e-16
CCDS81626.1 CRYAB gene_id:1410|Hs108|chr11 ( 108) 293 76.6 5.4e-15
CCDS82652.1 LOC102724652 gene_id:102724652|Hs108|c ( 136) 277 72.9 9.1e-14
CCDS3961.1 HSPB3 gene_id:8988|Hs108|chr5 ( 150) 240 64.2 4.3e-11
>>CCDS8352.1 HSPB2 gene_id:3316|Hs108|chr11 (182 aa)
initn: 1230 init1: 1230 opt: 1230 Z-score: 1578.4 bits: 298.7 E(32554): 1.3e-81
Smith-Waterman score: 1230; 100.0% identity (100.0% similar) in 182 aa overlap (1-182:1-182)
10 20 30 40 50 60
pF1KB8 MSGRSVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MSGRSVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 RAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 YVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 YVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIV
130 140 150 160 170 180
pF1KB8 EP
::
CCDS83 EP
>>CCDS8351.1 CRYAB gene_id:1410|Hs108|chr11 (175 aa)
initn: 358 init1: 310 opt: 381 Z-score: 492.2 bits: 97.6 E(32554): 4.3e-21
Smith-Waterman score: 381; 43.1% identity (72.3% similar) in 137 aa overlap (16-148:15-149)
10 20 30 40 50
pF1KB8 MSGRSVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEIL-TPTLYHGYYVRPRA---APA
. : .:::: .: ::: :: ... : : .:.:: . ::.
CCDS83 MDIAIHHPWIRRPFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPS
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 GEGSRAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSRE
. : ::.:: . .:.. :::.::.:.:. :... ...:: ..: .: :.:::.:::
CCDS83 WFDT--GLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISRE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 FCRTYVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEE
: : : .:::::: . ..:: ::.:....::
CCDS83 FHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGPERTIPITREEKPAVTAAPKK
120 130 140 150 160 170
180
pF1KB8 AAIVEP
>>CCDS12475.1 HSPB6 gene_id:126393|Hs108|chr19 (160 aa)
initn: 339 init1: 253 opt: 349 Z-score: 451.8 bits: 90.0 E(32554): 7.6e-19
Smith-Waterman score: 349; 45.0% identity (71.0% similar) in 131 aa overlap (18-146:22-146)
10 20 30 40 50
pF1KB8 MSGRSVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEI--LTPTLYHGYYVRPRAA
.. :.:: .:::::::: :. : :: ::.: :
CCDS12 MEIPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLR---A
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 PAGEGSRAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVS
:. .... . :.:...:::.::.:.:..:..: . .:: ::: .: :.::::.
CCDS12 PS---VALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 REFCRTYVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEE
::: : : :: ::: : .::: .:.:...:
CCDS12 REFHRRYRLPPGVDPAAVTSALSPEGVLSIQAAPASAQAPPPAAAK
120 130 140 150 160
180
pF1KB8 EEAAIVEP
>>CCDS82651.1 LOC102724652 gene_id:102724652|Hs108|chr21 (173 aa)
initn: 336 init1: 279 opt: 324 Z-score: 419.3 bits: 84.1 E(32554): 4.9e-17
Smith-Waterman score: 324; 38.0% identity (62.0% similar) in 158 aa overlap (21-178:19-170)
10 20 30 40 50 60
pF1KB8 MSGRSVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGS
:::: .: :::::. ..: : : : .
CCDS82 MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLL-PFLSSTISPYYRQSLFRTVL
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 RAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRT
.: ::.: .. :: ::::.::.:...::.. :...:. ..: .: : ::..:::: :
CCDS82 DSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 YVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIV
: ::..:: . .:: ::.:.. .:. ::. : : : . ::. .:
CCDS82 YRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAI-----PVSREEKPTSAPS
120 130 140 150 160 170
pF1KB8 EP
CCDS82 S
>>CCDS13695.1 CRYAA gene_id:1409|Hs108|chr21 (173 aa)
initn: 336 init1: 279 opt: 324 Z-score: 419.3 bits: 84.1 E(32554): 4.9e-17
Smith-Waterman score: 324; 38.0% identity (62.0% similar) in 158 aa overlap (21-178:19-170)
10 20 30 40 50 60
pF1KB8 MSGRSVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGS
:::: .: :::::. ..: : : : .
CCDS13 MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLL-PFLSSTISPYYRQSLFRTVL
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 RAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRT
.: ::.: .. :: ::::.::.:...::.. :...:. ..: .: : ::..:::: :
CCDS13 DSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 YVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIV
: ::..:: . .:: ::.:.. .:. ::. : : : . ::. .:
CCDS13 YRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAI-----PVSREEKPTSAPS
120 130 140 150 160 170
pF1KB8 EP
CCDS13 S
>>CCDS5583.1 HSPB1 gene_id:3315|Hs108|chr7 (205 aa)
initn: 351 init1: 294 opt: 309 Z-score: 399.0 bits: 80.6 E(32554): 6.6e-16
Smith-Waterman score: 341; 37.2% identity (58.9% similar) in 207 aa overlap (1-178:1-204)
10 20 30 40 50
pF1KB8 MSGRSVPHA---HPATAEYEFANP-SRLGEQRFGEGLLPEEI---LTPTLYHGYYVRPRA
:. : :: . :. .. : ::: .: :: :::: : . . :: :::
CCDS55 MTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGY-VRPLP
10 20 30 40 50
60 70 80 90
pF1KB8 APAGEG--------SRA-------GASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLE
: :. ::: :.::.: . .... :::.::.:::.::.: :...:
CCDS55 PAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVE
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB8 VSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVN
....: .: :.::..:: : : :.:: ::: .: ..:: .: :..::: .: :. :
CCDS55 ITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMP--KLATQSN
120 130 140 150 160 170
160 170 180
pF1KB8 EVYISL-------LPAPPDPEEEEEAAIVEP
:. : . : .: . .: ::
CCDS55 EITIPVTFESRAQLGGPEAAKSDETAAK
180 190 200
>>CCDS81626.1 CRYAB gene_id:1410|Hs108|chr11 (108 aa)
initn: 293 init1: 293 opt: 293 Z-score: 382.6 bits: 76.6 E(32554): 5.4e-15
Smith-Waterman score: 293; 46.3% identity (81.7% similar) in 82 aa overlap (67-148:1-82)
40 50 60 70 80 90
pF1KB8 EILTPTLYHGYYVRPRAAPAGEGSRAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNL
.:: . .:.. :::.::.:.:. :... ..
CCDS81 MRLEKDRFSVNLDVKHFSPEELKVKVLGDV
10 20 30
100 110 120 130 140 150
pF1KB8 LEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTE
.:: ..: .: :.:::.:::: : : .:::::: . ..:: ::.:....::
CCDS81 IEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGPER
40 50 60 70 80 90
160 170 180
pF1KB8 VNEVYISLLPAPPDPEEEEEAAIVEP
CCDS81 TIPITREEKPAVTAAPKK
100
>>CCDS82652.1 LOC102724652 gene_id:102724652|Hs108|chr21 (136 aa)
initn: 262 init1: 262 opt: 277 Z-score: 360.7 bits: 72.9 E(32554): 9.1e-14
Smith-Waterman score: 277; 37.5% identity (64.8% similar) in 128 aa overlap (51-178:12-133)
30 40 50 60 70 80
pF1KB8 PSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGSRAGASELRLSEGKFQAFLDV
:.: : .: : ..: .. :: ::::
CCDS82 MPVCPGDSHRPPKALPHLVCGRRG-RQVRSDRDKFVIFLDV
10 20 30 40
90 100 110 120 130 140
pF1KB8 SHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALSHDG
.::.:...::.. :...:. ..: .: : ::..:::: : : ::..:: . .:: ::
CCDS82 KHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADG
50 60 70 80 90 100
150 160 170 180
pF1KB8 ILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIVEP
.:.. .:. ::. : : : . ::. .:
CCDS82 MLTFCGPKIQTGLDATHAERAI-----PVSREEKPTSAPSS
110 120 130
>>CCDS3961.1 HSPB3 gene_id:8988|Hs108|chr5 (150 aa)
initn: 257 init1: 236 opt: 240 Z-score: 312.7 bits: 64.2 E(32554): 4.3e-11
Smith-Waterman score: 240; 37.5% identity (66.3% similar) in 104 aa overlap (50-151:47-150)
20 30 40 50 60 70
pF1KB8 NPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGSRAGASELRLSEGKFQAFLD
. ::: . . :. . : ....:: .::
CCDS39 QEEFEARGLEDCRLDHALYALPGPTIVDLRKTRAAQSPPVDSAAETPPREGKSHFQILLD
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB8 VSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALSHD
: .: :... ..: .. : ..:.: :.:.:::.:: : : : :: :. . :.: ::
CCDS39 VVQFLPEDIIIQTFEGWLLIKAQHGTRMDEHGFISRSFTRQYKLPDGVEIKDLSAVLCHD
80 90 100 110 120 130
140 150 160 170 180
pF1KB8 GILNLEA--PRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIVEP
::: .:. : : .
CCDS39 GILVVEVKDPVGTK
140 150
182 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:58:22 2016 done: Sat Nov 5 19:58:22 2016
Total Scan time: 2.070 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]