Result of FASTA (omim) for
pF1KB8685
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8685, 717 aa
1>>>pF1KB8685 717 - 717 aa - 717 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4126+/-0.000311; mu= 11.3362+/- 0.020
mean_var=145.1765+/-28.500, 0's: 0 Z-trim(121.1): 24 B-trim: 0 in 0/56
Lambda= 0.106445
statistics sampled from 37205 (37231) to 37205 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.437), width: 16
Scan time: 10.130
The best scores are: opt bits E(85289)
NP_110412 (OMIM: 607548) radial spoke head protein ( 717) 4891 762.9 0
XP_011525653 (OMIM: 607548) PREDICTED: radial spok ( 647) 4361 681.5 2.9e-195
NP_001010892 (OMIM: 612647,612649) radial spoke he ( 716) 1978 315.5 4.5e-85
XP_016866315 (OMIM: 612647,612649) PREDICTED: radi ( 600) 1245 202.9 3e-51
NP_001155136 (OMIM: 612647,612649) radial spoke he ( 600) 1245 202.9 3e-51
>>NP_110412 (OMIM: 607548) radial spoke head protein 6 h (717 aa)
initn: 4891 init1: 4891 opt: 4891 Z-score: 4065.9 bits: 762.9 E(85289): 0
Smith-Waterman score: 4891; 100.0% identity (100.0% similar) in 717 aa overlap (1-717:1-717)
10 20 30 40 50 60
pF1KB8 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALAADPEERQQIPPDAQRNAPGWSQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALAADPEERQQIPPDAQRNAPGWSQR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFPSEFQPQPYSDESRMQVAELTTSLML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 GSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFPSEFQPQPYSDESRMQVAELTTSLML
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTDQFSEGAQHGPYIRDDPALQFLPSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 QRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTDQFSEGAQHGPYIRDDPALQFLPSEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDLSLYEHLVNLLTKILNQRPEDPLSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 GFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDLSLYEHLVNLLTKILNQRPEDPLSVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 ESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQKALFTRSGGGTEGEQEMEEEVGETP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 ESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQKALFTRSGGGTEGEQEMEEEVGETP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 VPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLVEQQPIHTCRFWGKILGIKRSYLVAEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 VPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLVEQQPIHTCRFWGKILGIKRSYLVAEV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 EFREGEEEAEEEEVEEMTEGGEVMEAHGEEEGEEDEEKAVDIVPKSVWKPPPVIPKEESR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 EFREGEEEAEEEEVEEMTEGGEVMEAHGEEEGEEDEEKAVDIVPKSVWKPPPVIPKEESR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 SGANKYLYFVCNEPGLPWTRLPHVTPAQIVNARKIKKFFTGYLDTPVVSYPPFPGNEANY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 SGANKYLYFVCNEPGLPWTRLPHVTPAQIVNARKIKKFFTGYLDTPVVSYPPFPGNEANY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 LRAQIARISAATQVSPLGFYQFSEEEGDEEEEGGAGRDSYEENPDFEGIPVLELVDSMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 LRAQIARISAATQVSPLGFYQFSEEEGDEEEEGGAGRDSYEENPDFEGIPVLELVDSMAN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 WVHHTQHILPQGRCTWVNPLQKTEEEEDLGEEEEKADEGPEEVEQEVGPPLLTPLSEDAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 WVHHTQHILPQGRCTWVNPLQKTEEEEDLGEEEEKADEGPEEVEQEVGPPLLTPLSEDAE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 IMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGAYAYASGKKFENIYIGWGHKYSPESFNPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 IMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGAYAYASGKKFENIYIGWGHKYSPESFNPA
610 620 630 640 650 660
670 680 690 700 710
pF1KB8 LPAPIQQEYPSGPEIMEMSDPTVEEEQALKAAQEQALGATEEEEEGEEEEEGEETDD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 LPAPIQQEYPSGPEIMEMSDPTVEEEQALKAAQEQALGATEEEEEGEEEEEGEETDD
670 680 690 700 710
>>XP_011525653 (OMIM: 607548) PREDICTED: radial spoke he (647 aa)
initn: 4361 init1: 4361 opt: 4361 Z-score: 3626.6 bits: 681.5 E(85289): 2.9e-195
Smith-Waterman score: 4361; 100.0% identity (100.0% similar) in 638 aa overlap (1-638:1-638)
10 20 30 40 50 60
pF1KB8 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALAADPEERQQIPPDAQRNAPGWSQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALAADPEERQQIPPDAQRNAPGWSQR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFPSEFQPQPYSDESRMQVAELTTSLML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFPSEFQPQPYSDESRMQVAELTTSLML
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTDQFSEGAQHGPYIRDDPALQFLPSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTDQFSEGAQHGPYIRDDPALQFLPSEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDLSLYEHLVNLLTKILNQRPEDPLSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDLSLYEHLVNLLTKILNQRPEDPLSVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 ESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQKALFTRSGGGTEGEQEMEEEVGETP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQKALFTRSGGGTEGEQEMEEEVGETP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 VPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLVEQQPIHTCRFWGKILGIKRSYLVAEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLVEQQPIHTCRFWGKILGIKRSYLVAEV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 EFREGEEEAEEEEVEEMTEGGEVMEAHGEEEGEEDEEKAVDIVPKSVWKPPPVIPKEESR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFREGEEEAEEEEVEEMTEGGEVMEAHGEEEGEEDEEKAVDIVPKSVWKPPPVIPKEESR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 SGANKYLYFVCNEPGLPWTRLPHVTPAQIVNARKIKKFFTGYLDTPVVSYPPFPGNEANY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGANKYLYFVCNEPGLPWTRLPHVTPAQIVNARKIKKFFTGYLDTPVVSYPPFPGNEANY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 LRAQIARISAATQVSPLGFYQFSEEEGDEEEEGGAGRDSYEENPDFEGIPVLELVDSMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRAQIARISAATQVSPLGFYQFSEEEGDEEEEGGAGRDSYEENPDFEGIPVLELVDSMAN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 WVHHTQHILPQGRCTWVNPLQKTEEEEDLGEEEEKADEGPEEVEQEVGPPLLTPLSEDAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WVHHTQHILPQGRCTWVNPLQKTEEEEDLGEEEEKADEGPEEVEQEVGPPLLTPLSEDAE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 IMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGAYAYASGKKFENIYIGWGHKYSPESFNPA
::::::::::::::::::::::::::::::::::::::
XP_011 IMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGAYAYASGNVSLLLQKV
610 620 630 640
670 680 690 700 710
pF1KB8 LPAPIQQEYPSGPEIMEMSDPTVEEEQALKAAQEQALGATEEEEEGEEEEEGEETDD
>>NP_001010892 (OMIM: 612647,612649) radial spoke head p (716 aa)
initn: 1905 init1: 914 opt: 1978 Z-score: 1648.3 bits: 315.5 E(85289): 4.5e-85
Smith-Waterman score: 2305; 51.5% identity (76.5% similar) in 714 aa overlap (8-716:42-716)
10 20 30
pF1KB8 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALA
: . : : : :..:. ...:..
NP_001 ENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKTPL
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 ADPE--ERQQIPPDAQRNAPGWSQRGSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFP
. : : .. : . :. :. : ...: : :.. : .. : ..: .:
NP_001 GGPAGPETSSPAPVSPRE-PSSSPSPLAPARQDLAAPP--QSD--RTTSV-IPEAGTPYP
80 90 100 110 120
100 110 120 130 140 150
pF1KB8 SEFQPQPYSDESRMQVAELTTSLMLQRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTD
. .. . . :: . . . . .:. :: . : . : .... . : .:...: .
NP_001 DPLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHLCGRRDVSYNNAKQKEL-RFDVFQEE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 QFSEGAQHGPYIRDDPALQFLPSELGFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDL
. ... : ..:: :. ...: : ::...::::::::.:: : .
NP_001 D-----SNSDYDLQQPA----PG-------GSEVA-PSMLEITIQNAKAYLLKTSSNSGF
190 200 210 220
220 230 240 250 260 270
pF1KB8 SLYEHLVNLLTKILNQRPEDPLSVLESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQ
.::.:: :.::::::.:::. ....:.... .. : :.:.:... :. :::..::::
NP_001 NLYDHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQ
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB8 KALFTRSGGGTEG-EQEMEEEVGETPVPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLV
:::: . : :: .::.:.:..:. .::.::.:::::::::::..::..:::::.:::.
NP_001 KALFLQ--GHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRIFLALKQLT
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB8 EQQPIHTCRFWGKILGIKRSYLVAEVEFREGE--EEAEEEEVEEMTEGGEVMEAHGEEEG
. .::. :::::::::.. .:.:::::::::: ::.:::.: : ..:: ::: :
NP_001 DTHPIQRCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDVAEERDNGES-EAH---ED
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB8 EEDEEKAVDIVPKSVWKPPPVIPKEESRSGANKYLYFVCNEPGLPWTRLPHVTPAQIVNA
:::: .::: .: : .:::::::.:::::.:::::::: ::..:: : ::::: :
NP_001 EEDE------LPKSFYKAPQAIPKEESRTGANKYVYFVCNEPGRPWVKLPPVIPAQIVIA
410 420 430 440 450
460 470 480 490 500 510
pF1KB8 RKIKKFFTGYLDTPVVSYPPFPGNEANYLRAQIARISAATQVSPLGFYQFSEEEGDEEEE
::::::::: ::.:..:::::::::.::::::::::::.:.:::::::::.::::.::::
NP_001 RKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEE
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB8 GGAGRDSYEENPDFEGIPVLELVDSMANWVHHTQHILPQGRCTWVNPLQKTEEEEDLGEE
. .::.:.::::::::: :..::.:..:::::.:::: ::::.: : .::.::::. ::
NP_001 AEGGRNSFEENPDFEGIQVIDLVESLSNWVHHVQHILSQGRCNWFNSIQKNEEEEE--EE
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB8 EEKADEGPEEVEQEVGPPLLTPLSEDAEIMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGA
.:. :.. . .::::: :::::.::: ::... ::::::: .: :::..::..:::::::
NP_001 DEEKDDS-DYIEQEVGLPLLTPISEDLEIQNIPPWTTRLSSNLIPQYAIAVLQSNLWPGA
580 590 600 610 620 630
640 650 660 670 680 690
pF1KB8 YAYASGKKFENIYIGWGHKYSPESFNPALPAPIQQEYPSGPEIMEMSDPTVEEEQALKAA
::...::::::.::::::::::....: .: :. ::::::::: ::.::.::::::..::
NP_001 YAFSNGKKFENFYIGWGHKYSPDNYTPPVPPPVYQEYPSGPEITEMDDPSVEEEQAFRAA
640 650 660 670 680 690
700 710
pF1KB8 QEQALGATEEEEEGEEEEEGEETDD
:: .: :.:.:: :.:.: .. :
NP_001 QEAVLLAAENEESEEDEDEEDDYD
700 710
>>XP_016866315 (OMIM: 612647,612649) PREDICTED: radial s (600 aa)
initn: 1504 init1: 810 opt: 1245 Z-score: 1041.0 bits: 202.9 E(85289): 3e-51
Smith-Waterman score: 1572; 48.5% identity (73.2% similar) in 549 aa overlap (8-551:42-554)
10 20 30
pF1KB8 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALA
: . : : : :..:. ...:..
XP_016 ENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKTPL
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 ADPE--ERQQIPPDAQRNAPGWSQRGSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFP
. : : .. : . :. :. : ...: : :.. : .. : ..: .:
XP_016 GGPAGPETSSPAPVSPRE-PSSSPSPLAPARQDLAAPP--QSD--RTTSV-IPEAGTPYP
80 90 100 110 120
100 110 120 130 140 150
pF1KB8 SEFQPQPYSDESRMQVAELTTSLMLQRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTD
. .. . . :: . . . . .:. :: . : . : .... . : .:...:
XP_016 DPLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHLCGRRDVSYNNAKQKEL-RFDVFQ--
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 QFSEGAQHGPYIRDDPALQFLPSELGFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDL
: ... : ..:: :. ...: : ::...::::::::.:: : .
XP_016 ---EEDSNSDYDLQQPA----PG-------GSEVA-PSMLEITIQNAKAYLLKTSSNSGF
190 200 210 220
220 230 240 250 260 270
pF1KB8 SLYEHLVNLLTKILNQRPEDPLSVLESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQ
.::.:: :.::::::.:::. ....:.... .. : :.:.:... :. :::..::::
XP_016 NLYDHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQ
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB8 KALFTRSGGGTEG-EQEMEEEVGETPVPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLV
:::: . : :: .::.:.:..:. .::.::.:::::::::::..::..:::::.:::.
XP_016 KALFLQ--GHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRIFLALKQLT
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB8 EQQPIHTCRFWGKILGIKRSYLVAEVEFREGE--EEAEEEEVEEMTEGGEVMEAHGEEEG
. .::. :::::::::.. .:.:::::::::: ::.:::.: : ..:: ::: :
XP_016 DTHPIQRCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDVAEERDNGES-EAH---ED
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB8 EEDEEKAVDIVPKSVWKPPPVIPKEESRSGANKYLYFVCNEPGLPWTRLPHVTPAQIVNA
:::: .::: .: : .:::::::.:::::.:::::::: ::..:: : ::::: :
XP_016 EEDE------LPKSFYKAPQAIPKEESRTGANKYVYFVCNEPGRPWVKLPPVIPAQIVIA
410 420 430 440 450
460 470 480 490 500 510
pF1KB8 RKIKKFFTGYLDTPVVSYPPFPGNEANYLRAQIARISAATQVSPLGFYQFSEEEGDEEEE
::::::::: ::.:..:::::::::.::::::::::::.:.:::::::::.::::.::::
XP_016 RKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEE
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB8 GGAGRDSYEENPDFEGIPVLELVDSMANWVHHTQHILPQGRCTWVNPLQKTEEEEDLGEE
. .::.:.::::::::: :..::.:..:::::.:::: :
XP_016 AEGGRNSFEENPDFEGIQVIDLVESLSNWVHHVQHILSQRFRIYPPGQHGYPQISFHNML
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB8 EEKADEGPEEVEQEVGPPLLTPLSEDAEIMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGA
XP_016 LQSFNPTFGLEHMPSPMAKSLKIST
580 590 600
>>NP_001155136 (OMIM: 612647,612649) radial spoke head p (600 aa)
initn: 1504 init1: 810 opt: 1245 Z-score: 1041.0 bits: 202.9 E(85289): 3e-51
Smith-Waterman score: 1572; 48.5% identity (73.2% similar) in 549 aa overlap (8-551:42-554)
10 20 30
pF1KB8 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALA
: . : : : :..:. ...:..
NP_001 ENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKTPL
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 ADPE--ERQQIPPDAQRNAPGWSQRGSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFP
. : : .. : . :. :. : ...: : :.. : .. : ..: .:
NP_001 GGPAGPETSSPAPVSPRE-PSSSPSPLAPARQDLAAPP--QSD--RTTSV-IPEAGTPYP
80 90 100 110 120
100 110 120 130 140 150
pF1KB8 SEFQPQPYSDESRMQVAELTTSLMLQRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTD
. .. . . :: . . . . .:. :: . : . : .... . : .:...:
NP_001 DPLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHLCGRRDVSYNNAKQKEL-RFDVFQ--
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 QFSEGAQHGPYIRDDPALQFLPSELGFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDL
: ... : ..:: :. ...: : ::...::::::::.:: : .
NP_001 ---EEDSNSDYDLQQPA----PG-------GSEVA-PSMLEITIQNAKAYLLKTSSNSGF
190 200 210 220
220 230 240 250 260 270
pF1KB8 SLYEHLVNLLTKILNQRPEDPLSVLESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQ
.::.:: :.::::::.:::. ....:.... .. : :.:.:... :. :::..::::
NP_001 NLYDHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQ
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB8 KALFTRSGGGTEG-EQEMEEEVGETPVPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLV
:::: . : :: .::.:.:..:. .::.::.:::::::::::..::..:::::.:::.
NP_001 KALFLQ--GHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRIFLALKQLT
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB8 EQQPIHTCRFWGKILGIKRSYLVAEVEFREGE--EEAEEEEVEEMTEGGEVMEAHGEEEG
. .::. :::::::::.. .:.:::::::::: ::.:::.: : ..:: ::: :
NP_001 DTHPIQRCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDVAEERDNGES-EAH---ED
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB8 EEDEEKAVDIVPKSVWKPPPVIPKEESRSGANKYLYFVCNEPGLPWTRLPHVTPAQIVNA
:::: .::: .: : .:::::::.:::::.:::::::: ::..:: : ::::: :
NP_001 EEDE------LPKSFYKAPQAIPKEESRTGANKYVYFVCNEPGRPWVKLPPVIPAQIVIA
410 420 430 440 450
460 470 480 490 500 510
pF1KB8 RKIKKFFTGYLDTPVVSYPPFPGNEANYLRAQIARISAATQVSPLGFYQFSEEEGDEEEE
::::::::: ::.:..:::::::::.::::::::::::.:.:::::::::.::::.::::
NP_001 RKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEE
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB8 GGAGRDSYEENPDFEGIPVLELVDSMANWVHHTQHILPQGRCTWVNPLQKTEEEEDLGEE
. .::.:.::::::::: :..::.:..:::::.:::: :
NP_001 AEGGRNSFEENPDFEGIQVIDLVESLSNWVHHVQHILSQRFRIYPPGQHGYPQISFHNML
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB8 EEKADEGPEEVEQEVGPPLLTPLSEDAEIMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGA
NP_001 LQSFNPTFGLEHMPSPMAKSLKIST
580 590 600
717 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 22:10:02 2016 done: Sat Nov 5 22:10:03 2016
Total Scan time: 10.130 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]