Result of FASTA (omim) for
pF1KB8644
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8644, 153 aa
1>>>pF1KB8644 153 - 153 aa - 153 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6885+/-0.000245; mu= 6.5602+/- 0.016
mean_var=108.6924+/-22.053, 0's: 0 Z-trim(123.3): 12 B-trim: 4 in 1/61
Lambda= 0.123020
statistics sampled from 42727 (42741) to 42727 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.827), E-opt: 0.2 (0.501), width: 16
Scan time: 4.480
The best scores are: opt bits E(85289)
XP_011520746 (OMIM: 616885) PREDICTED: calcium-reg ( 147) 647 124.0 8.8e-29
NP_055131 (OMIM: 616885) calcium-regulated heat-st ( 147) 647 124.0 8.8e-29
NP_001265193 (OMIM: 616885) calcium-regulated heat ( 147) 647 124.0 8.8e-29
NP_001265194 (OMIM: 616885) calcium-regulated heat ( 147) 647 124.0 8.8e-29
NP_001265189 (OMIM: 616885) calcium-regulated heat ( 147) 647 124.0 8.8e-29
NP_001265190 (OMIM: 616885) calcium-regulated heat ( 147) 647 124.0 8.8e-29
NP_001265191 (OMIM: 616885) calcium-regulated heat ( 147) 647 124.0 8.8e-29
NP_001265195 (OMIM: 616885) calcium-regulated heat ( 147) 647 124.0 8.8e-29
NP_001265192 (OMIM: 616885) calcium-regulated heat ( 147) 647 124.0 8.8e-29
XP_005255286 (OMIM: 616885) PREDICTED: calcium-reg ( 147) 647 124.0 8.8e-29
NP_001035941 (OMIM: 616885) calcium-regulated heat ( 147) 647 124.0 8.8e-29
XP_005255285 (OMIM: 616885) PREDICTED: calcium-reg ( 168) 647 124.1 9.9e-29
>>XP_011520746 (OMIM: 616885) PREDICTED: calcium-regulat (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
XP_011 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
XP_011 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
XP_011 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
>>NP_055131 (OMIM: 616885) calcium-regulated heat-stable (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
NP_055 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
NP_055 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
NP_055 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
>>NP_001265193 (OMIM: 616885) calcium-regulated heat-sta (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
NP_001 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
NP_001 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
NP_001 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
>>NP_001265194 (OMIM: 616885) calcium-regulated heat-sta (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
NP_001 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
NP_001 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
NP_001 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
>>NP_001265189 (OMIM: 616885) calcium-regulated heat-sta (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
NP_001 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
NP_001 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
NP_001 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
>>NP_001265190 (OMIM: 616885) calcium-regulated heat-sta (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
NP_001 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
NP_001 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
NP_001 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
>>NP_001265191 (OMIM: 616885) calcium-regulated heat-sta (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
NP_001 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
NP_001 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
NP_001 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
>>NP_001265195 (OMIM: 616885) calcium-regulated heat-sta (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
NP_001 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
NP_001 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
NP_001 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
>>NP_001265192 (OMIM: 616885) calcium-regulated heat-sta (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
NP_001 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
NP_001 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
NP_001 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
>>XP_005255286 (OMIM: 616885) PREDICTED: calcium-regulat (147 aa)
initn: 681 init1: 599 opt: 647 Z-score: 637.7 bits: 124.0 E(85289): 8.8e-29
Smith-Waterman score: 647; 64.7% identity (79.7% similar) in 153 aa overlap (1-153:1-147)
10 20 30 40 50 60
pF1KB8 MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSAT
:.:: :: :: :. . . : : :: : ::.: .::::::.::::.:::
XP_005 MSSEPPPPPQ-PPTHQASVGLLDT-PRSRERSPSPLRGNV----VPSPLPTRRTRTFSAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPI
.::: :::.::::: : ::.::::::: .:. :::.:.::.::::::::::::::::: :
XP_005 VRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSI
60 70 80 90 100 110
130 140 150
pF1KB8 PPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS
::::.:.::::::.:.::: : ::::::.:..:
XP_005 PPKNEKLQAVEVVITHLAPGTKHETWSGHVISS
120 130 140
153 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:53:38 2016 done: Sat Nov 5 19:53:39 2016
Total Scan time: 4.480 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]