Result of FASTA (omim) for
pF1KB8468
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8468, 297 aa
1>>>pF1KB8468 297 - 297 aa - 297 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.4825+/-0.000742; mu= -21.8755+/- 0.043
mean_var=716.6701+/-158.180, 0's: 0 Z-trim(112.9): 1780 B-trim: 0 in 0/56
Lambda= 0.047909
statistics sampled from 19611 (22054) to 19611 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.259), width: 16
Scan time: 7.380
The best scores are: opt bits E(85289)
XP_005270360 (OMIM: 116940) PREDICTED: cyclin-depe ( 297) 1956 151.0 2.6e-36
NP_001307847 (OMIM: 116940) cyclin-dependent kinas ( 297) 1956 151.0 2.6e-36
NP_001777 (OMIM: 116940) cyclin-dependent kinase 1 ( 297) 1956 151.0 2.6e-36
NP_001789 (OMIM: 116953) cyclin-dependent kinase 2 ( 298) 1327 107.5 3.2e-23
NP_001249 (OMIM: 123828) cyclin-dependent kinase 3 ( 305) 1322 107.2 4.1e-23
NP_004926 (OMIM: 123831,616342) cyclin-dependent-l ( 292) 1099 91.8 1.8e-18
NP_001163935 (OMIM: 603440) cyclin-dependent kinas ( 523) 1101 92.2 2.3e-18
NP_002586 (OMIM: 603440) cyclin-dependent kinase 1 ( 523) 1101 92.2 2.3e-18
XP_016874894 (OMIM: 603440) PREDICTED: cyclin-depe ( 523) 1101 92.2 2.3e-18
XP_016874895 (OMIM: 603440) PREDICTED: cyclin-depe ( 523) 1101 92.2 2.3e-18
XP_016885061 (OMIM: 311550) PREDICTED: cyclin-depe ( 496) 1058 89.2 1.7e-17
XP_016885060 (OMIM: 311550) PREDICTED: cyclin-depe ( 496) 1058 89.2 1.7e-17
NP_006192 (OMIM: 311550) cyclin-dependent kinase 1 ( 496) 1058 89.2 1.7e-17
XP_016885062 (OMIM: 311550) PREDICTED: cyclin-depe ( 496) 1058 89.2 1.7e-17
XP_016885059 (OMIM: 311550) PREDICTED: cyclin-depe ( 496) 1058 89.2 1.7e-17
XP_011542226 (OMIM: 311550) PREDICTED: cyclin-depe ( 497) 1058 89.2 1.7e-17
XP_011542228 (OMIM: 311550) PREDICTED: cyclin-depe ( 497) 1058 89.2 1.7e-17
XP_011542229 (OMIM: 311550) PREDICTED: cyclin-depe ( 497) 1058 89.2 1.7e-17
XP_011542230 (OMIM: 311550) PREDICTED: cyclin-depe ( 497) 1058 89.2 1.7e-17
XP_011542227 (OMIM: 311550) PREDICTED: cyclin-depe ( 497) 1058 89.2 1.7e-17
NP_148978 (OMIM: 311550) cyclin-dependent kinase 1 ( 502) 1058 89.2 1.7e-17
XP_011542225 (OMIM: 311550) PREDICTED: cyclin-depe ( 503) 1058 89.2 1.7e-17
XP_011542224 (OMIM: 311550) PREDICTED: cyclin-depe ( 540) 1058 89.3 1.8e-17
XP_016885058 (OMIM: 311550) PREDICTED: cyclin-depe ( 543) 1058 89.3 1.8e-17
XP_011542223 (OMIM: 311550) PREDICTED: cyclin-depe ( 544) 1058 89.3 1.8e-17
NP_001163931 (OMIM: 311550) cyclin-dependent kinas ( 570) 1058 89.3 1.9e-17
XP_011542222 (OMIM: 311550) PREDICTED: cyclin-depe ( 571) 1058 89.3 1.9e-17
NP_002587 (OMIM: 169190) cyclin-dependent kinase 1 ( 474) 1050 88.7 2.5e-17
NP_997667 (OMIM: 169190) cyclin-dependent kinase 1 ( 474) 1050 88.7 2.5e-17
NP_997668 (OMIM: 169190) cyclin-dependent kinase 1 ( 504) 1050 88.7 2.6e-17
XP_011507904 (OMIM: 169190) PREDICTED: cyclin-depe ( 542) 1050 88.7 2.7e-17
XP_016856912 (OMIM: 169190) PREDICTED: cyclin-depe ( 572) 1050 88.8 2.8e-17
XP_011536034 (OMIM: 116953) PREDICTED: cyclin-depe ( 346) 939 80.8 4.2e-15
XP_005250496 (OMIM: 610679) PREDICTED: cyclin-depe ( 423) 920 79.6 1.2e-14
XP_016867809 (OMIM: 610679) PREDICTED: cyclin-depe ( 423) 920 79.6 1.2e-14
XP_005250495 (OMIM: 610679) PREDICTED: cyclin-depe ( 423) 920 79.6 1.2e-14
XP_016867810 (OMIM: 610679) PREDICTED: cyclin-depe ( 423) 920 79.6 1.2e-14
XP_016867811 (OMIM: 610679) PREDICTED: cyclin-depe ( 423) 920 79.6 1.2e-14
NP_001274065 (OMIM: 610679) cyclin-dependent kinas ( 423) 920 79.6 1.2e-14
XP_005250493 (OMIM: 610679) PREDICTED: cyclin-depe ( 450) 920 79.6 1.2e-14
NP_036527 (OMIM: 610679) cyclin-dependent kinase 1 ( 451) 920 79.6 1.2e-14
XP_011514608 (OMIM: 610679) PREDICTED: cyclin-depe ( 469) 920 79.7 1.2e-14
NP_001274064 (OMIM: 610679) cyclin-dependent kinas ( 469) 920 79.7 1.2e-14
NP_203698 (OMIM: 116940) cyclin-dependent kinase 1 ( 240) 902 78.0 2e-14
NP_001250 (OMIM: 603368,616080) cyclin-dependent k ( 326) 885 77.0 5.3e-14
NP_001138778 (OMIM: 603368,616080) cyclin-dependen ( 326) 885 77.0 5.3e-14
XP_006715898 (OMIM: 603368,616080) PREDICTED: cycl ( 326) 885 77.0 5.3e-14
NP_001790 (OMIM: 601955) cyclin-dependent kinase 7 ( 346) 852 74.8 2.7e-13
NP_631897 (OMIM: 616147) cyclin-dependent kinase 1 ( 384) 839 74.0 5.3e-13
XP_005246839 (OMIM: 616147) PREDICTED: cyclin-depe ( 384) 839 74.0 5.3e-13
>>XP_005270360 (OMIM: 116940) PREDICTED: cyclin-dependen (297 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 772.8 bits: 151.0 E(85289): 2.6e-36
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 297 aa overlap (1-297:1-297)
10 20 30 40 50 60
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSAR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 YSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNT
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 FPKWKPGSLASHVKNLDENGLDLLSKMLTYDPAKRISGKMALNHPYFNDLDNQIKKM
:::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_005 FPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLDNQIKKM
250 260 270 280 290
>>NP_001307847 (OMIM: 116940) cyclin-dependent kinase 1 (297 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 772.8 bits: 151.0 E(85289): 2.6e-36
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 297 aa overlap (1-297:1-297)
10 20 30 40 50 60
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSAR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 YSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNT
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 FPKWKPGSLASHVKNLDENGLDLLSKMLTYDPAKRISGKMALNHPYFNDLDNQIKKM
:::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
NP_001 FPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLDNQIKKM
250 260 270 280 290
>>NP_001777 (OMIM: 116940) cyclin-dependent kinase 1 iso (297 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 772.8 bits: 151.0 E(85289): 2.6e-36
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 297 aa overlap (1-297:1-297)
10 20 30 40 50 60
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSAR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 YSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNT
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 FPKWKPGSLASHVKNLDENGLDLLSKMLTYDPAKRISGKMALNHPYFNDLDNQIKKM
:::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
NP_001 FPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLDNQIKKM
250 260 270 280 290
>>NP_001789 (OMIM: 116953) cyclin-dependent kinase 2 iso (298 aa)
initn: 1327 init1: 899 opt: 1327 Z-score: 537.8 bits: 107.5 E(85289): 3.2e-23
Smith-Waterman score: 1327; 65.8% identity (85.2% similar) in 298 aa overlap (1-297:1-296)
10 20 30 40 50 60
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH
::.. :.:::::::::::::.:.: ::.:::.:::::..: ::::::::::::::::: :
NP_001 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 PNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLD-SIPPGQYMDSSLVKSYLYQILQGIVFC
::::.: ::. ...:::.:::: .::::..: : : . :.::::.:.:::..::
NP_001 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC
70 80 90 100 110
120 130 140 150 160 170
pF1KB8 HSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSA
::.::::::::::::::. .:.:::::::::::::.:.:.:::::::::::.::.:::
NP_001 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 RYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKN
::: :::::.: ::::..:.. :: :::::::::::::.::::.. ::: : :. :::
NP_001 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 TFPKWKPGSLASHVKNLDENGLDLLSKMLTYDPAKRISGKMALNHPYFNDLDNQIKKM
.:::: .... : :::.: .:::.:: ::: ::::.: :: ::.:.:. . . ..
NP_001 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL
240 250 260 270 280 290
>>NP_001249 (OMIM: 123828) cyclin-dependent kinase 3 [Ho (305 aa)
initn: 1312 init1: 900 opt: 1322 Z-score: 535.9 bits: 107.2 E(85289): 4.1e-23
Smith-Waterman score: 1322; 67.0% identity (86.1% similar) in 288 aa overlap (1-288:1-287)
10 20 30 40 50 60
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH
:. . :.:::::::::::::.... :::.::.:::::. : :::::::::::::::::.:
NP_001 MDMFQKVEKIGEGTYGVVYKAKNRETGQLVALKKIRLDLEMEGVPSTAIREISLLKELKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCH
:::: : ::. .. .:::.:::::.:::::.:: : :. . :.::::.:.:::. :::
NP_001 PNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTP-GSELPLHLIKSYLFQLLQGVSFCH
70 80 90 100 110
130 140 150 160 170 180
pF1KB8 SRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSAR
:.::.:::::::::::.. :.:::::::::::::.:.:.:::::::::::.::.::::
NP_001 SHRVIHRDLKPQNLLINELGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 YSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNT
:.: ::::::: ::::..:.: :: ::::::::::::: ::::....:: : .: :::..
NP_001 YTTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRIFRMLGTPSEDTWPGVTQLPDYKGS
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 FPKWKPGSLASHVKNLDENGLDLLSKMLTYDPAKRISGKMALNHPYFNDLDNQIKKM
:::: .: : ::. .: ::: ..: :::..::..: :: ::::.
NP_001 FPKWTRKGLEEIVPNLEPEGRDLLMQLLQYDPSQRITAKTALAHPYFSSPEPSPAARQYV
240 250 260 270 280 290
NP_001 LQRFRH
300
>>NP_004926 (OMIM: 123831,616342) cyclin-dependent-like (292 aa)
initn: 1095 init1: 483 opt: 1099 Z-score: 452.8 bits: 91.8 E(85289): 1.8e-18
Smith-Waterman score: 1099; 57.3% identity (82.3% similar) in 293 aa overlap (1-290:1-289)
10 20 30 40 50 60
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH
:. : :.:::::::::.:.:.... : ..::.:..::....:::::.:.::: :::::.:
NP_004 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCH
::: :.::: .:..: :.::: ..:::::.:: :. .: .:::.:.:.:.:. :::
NP_004 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GD-LDPEIVKSFLFQLLKGLGFCH
70 80 90 100 110
130 140 150 160 170 180
pF1KB8 SRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSAR
:: :::::::::::::. .: .::::::::::::::.: :. :::::::: :.::.:.
NP_004 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL
120 130 140 150 160 170
190 200 210 220 230
pF1KB8 YSTPVDIWSIGTIFAELATK-KPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKN
::: .:.:: : ::::::. .::: :.. ::: :::: ::::..: :: . .: :::
NP_004 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 TFPKWKPG--SLASHVKNLDENGLDLLSKMLTYDPAKRISGKMALNHPYFNDLDNQIKKM
.: . :. ::.. : .:. .: :::...: .:..:::.. ::.::::.:.
NP_004 PYPMY-PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP
240 250 260 270 280 290
>>NP_001163935 (OMIM: 603440) cyclin-dependent kinase 17 (523 aa)
initn: 1103 init1: 593 opt: 1101 Z-score: 450.8 bits: 92.2 E(85289): 2.3e-18
Smith-Waterman score: 1101; 54.4% identity (81.5% similar) in 298 aa overlap (1-297:189-483)
10 20 30
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVV
:: : :.::.:::::..::::: : : ..:
NP_001 EKLQINSPPFDQPMSRRSRRASLSEIGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLV
160 170 180 190 200 210
40 50 60 70 80 90
pF1KB8 AMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKY
:.:.:::: .:::.: :::::.::::.:.: :::.:.:.. :. : :.::.:. :::.:
NP_001 ALKEIRLE-HEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQY
220 230 240 250 260 270
100 110 120 130 140 150
pF1KB8 LDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLA
.:. :. :. :: .:::::.:...:: :.:::::::::::::..:: .::::::::
NP_001 MDDC--GNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEKGELKLADFGLA
280 290 300 310 320 330
160 170 180 190 200 210
pF1KB8 RAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEI
:: ..: ..:..:::::::: :.:::::..::: .:.:..: :: :.:. .::: :..
NP_001 RAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE
340 350 360 370 380 390
220 230 240 250 260
pF1KB8 DQLFRIFRALGTPNNEVWPEVESLQDYKN-TFPKWKPGSLASHVKNLDENGLDLLSKMLT
:.: ::: ::::..:.:: . : ...:: .:::.:: : .:. :: .:..:..:.:
NP_001 DELHLIFRLLGTPSQETWPGISSNEEFKNYNFPKYKPQPLINHAPRLDSEGIELITKFLQ
400 410 420 430 440 450
270 280 290
pF1KB8 YDPAKRISGKMALNHPYFNDLDNQIKKM
:. ::.:.. :..: :: .: .:. .
NP_001 YESKKRVSAEEAMKHVYFRSLGPRIHALPESVSIFSLKEIQLQKDPGFRNSSYPETGVFV
460 470 480 490 500 510
>>NP_002586 (OMIM: 603440) cyclin-dependent kinase 17 is (523 aa)
initn: 1103 init1: 593 opt: 1101 Z-score: 450.8 bits: 92.2 E(85289): 2.3e-18
Smith-Waterman score: 1101; 54.4% identity (81.5% similar) in 298 aa overlap (1-297:189-483)
10 20 30
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVV
:: : :.::.:::::..::::: : : ..:
NP_002 EKLQINSPPFDQPMSRRSRRASLSEIGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLV
160 170 180 190 200 210
40 50 60 70 80 90
pF1KB8 AMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKY
:.:.:::: .:::.: :::::.::::.:.: :::.:.:.. :. : :.::.:. :::.:
NP_002 ALKEIRLE-HEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQY
220 230 240 250 260 270
100 110 120 130 140 150
pF1KB8 LDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLA
.:. :. :. :: .:::::.:...:: :.:::::::::::::..:: .::::::::
NP_002 MDDC--GNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEKGELKLADFGLA
280 290 300 310 320 330
160 170 180 190 200 210
pF1KB8 RAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEI
:: ..: ..:..:::::::: :.:::::..::: .:.:..: :: :.:. .::: :..
NP_002 RAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE
340 350 360 370 380 390
220 230 240 250 260
pF1KB8 DQLFRIFRALGTPNNEVWPEVESLQDYKN-TFPKWKPGSLASHVKNLDENGLDLLSKMLT
:.: ::: ::::..:.:: . : ...:: .:::.:: : .:. :: .:..:..:.:
NP_002 DELHLIFRLLGTPSQETWPGISSNEEFKNYNFPKYKPQPLINHAPRLDSEGIELITKFLQ
400 410 420 430 440 450
270 280 290
pF1KB8 YDPAKRISGKMALNHPYFNDLDNQIKKM
:. ::.:.. :..: :: .: .:. .
NP_002 YESKKRVSAEEAMKHVYFRSLGPRIHALPESVSIFSLKEIQLQKDPGFRNSSYPETGHGK
460 470 480 490 500 510
>>XP_016874894 (OMIM: 603440) PREDICTED: cyclin-dependen (523 aa)
initn: 1103 init1: 593 opt: 1101 Z-score: 450.8 bits: 92.2 E(85289): 2.3e-18
Smith-Waterman score: 1101; 54.4% identity (81.5% similar) in 298 aa overlap (1-297:189-483)
10 20 30
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVV
:: : :.::.:::::..::::: : : ..:
XP_016 EKLQINSPPFDQPMSRRSRRASLSEIGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLV
160 170 180 190 200 210
40 50 60 70 80 90
pF1KB8 AMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKY
:.:.:::: .:::.: :::::.::::.:.: :::.:.:.. :. : :.::.:. :::.:
XP_016 ALKEIRLE-HEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQY
220 230 240 250 260 270
100 110 120 130 140 150
pF1KB8 LDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLA
.:. :. :. :: .:::::.:...:: :.:::::::::::::..:: .::::::::
XP_016 MDDC--GNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEKGELKLADFGLA
280 290 300 310 320 330
160 170 180 190 200 210
pF1KB8 RAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEI
:: ..: ..:..:::::::: :.:::::..::: .:.:..: :: :.:. .::: :..
XP_016 RAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE
340 350 360 370 380 390
220 230 240 250 260
pF1KB8 DQLFRIFRALGTPNNEVWPEVESLQDYKN-TFPKWKPGSLASHVKNLDENGLDLLSKMLT
:.: ::: ::::..:.:: . : ...:: .:::.:: : .:. :: .:..:..:.:
XP_016 DELHLIFRLLGTPSQETWPGISSNEEFKNYNFPKYKPQPLINHAPRLDSEGIELITKFLQ
400 410 420 430 440 450
270 280 290
pF1KB8 YDPAKRISGKMALNHPYFNDLDNQIKKM
:. ::.:.. :..: :: .: .:. .
XP_016 YESKKRVSAEEAMKHVYFRSLGPRIHALPESVSIFSLKEIQLQKDPGFRNSSYPETGHGK
460 470 480 490 500 510
>>XP_016874895 (OMIM: 603440) PREDICTED: cyclin-dependen (523 aa)
initn: 1103 init1: 593 opt: 1101 Z-score: 450.8 bits: 92.2 E(85289): 2.3e-18
Smith-Waterman score: 1101; 54.4% identity (81.5% similar) in 298 aa overlap (1-297:189-483)
10 20 30
pF1KB8 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVV
:: : :.::.:::::..::::: : : ..:
XP_016 EKLQINSPPFDQPMSRRSRRASLSEIGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLV
160 170 180 190 200 210
40 50 60 70 80 90
pF1KB8 AMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKY
:.:.:::: .:::.: :::::.::::.:.: :::.:.:.. :. : :.::.:. :::.:
XP_016 ALKEIRLE-HEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQY
220 230 240 250 260 270
100 110 120 130 140 150
pF1KB8 LDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLA
.:. :. :. :: .:::::.:...:: :.:::::::::::::..:: .::::::::
XP_016 MDDC--GNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEKGELKLADFGLA
280 290 300 310 320 330
160 170 180 190 200 210
pF1KB8 RAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEI
:: ..: ..:..:::::::: :.:::::..::: .:.:..: :: :.:. .::: :..
XP_016 RAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE
340 350 360 370 380 390
220 230 240 250 260
pF1KB8 DQLFRIFRALGTPNNEVWPEVESLQDYKN-TFPKWKPGSLASHVKNLDENGLDLLSKMLT
:.: ::: ::::..:.:: . : ...:: .:::.:: : .:. :: .:..:..:.:
XP_016 DELHLIFRLLGTPSQETWPGISSNEEFKNYNFPKYKPQPLINHAPRLDSEGIELITKFLQ
400 410 420 430 440 450
270 280 290
pF1KB8 YDPAKRISGKMALNHPYFNDLDNQIKKM
:. ::.:.. :..: :: .: .:. .
XP_016 YESKKRVSAEEAMKHVYFRSLGPRIHALPESVSIFSLKEIQLQKDPGFRNSSYPETGHGK
460 470 480 490 500 510
297 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 23:18:54 2016 done: Sat Nov 5 23:18:55 2016
Total Scan time: 7.380 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]