Result of FASTA (ccds) for
pF1KB8467
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8467, 449 aa
1>>>pF1KB8467 449 - 449 aa - 449 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9757+/-0.00101; mu= 19.1444+/- 0.060
mean_var=61.5016+/-12.026, 0's: 0 Z-trim(103.7): 38 B-trim: 4 in 1/49
Lambda= 0.163543
statistics sampled from 7479 (7515) to 7479 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.231), width: 16
Scan time: 2.760
The best scores are: opt bits E(32554)
CCDS13751.1 TUBA8 gene_id:51807|Hs108|chr22 ( 449) 3014 720.0 1.2e-207
CCDS8782.1 TUBA1C gene_id:84790|Hs108|chr12 ( 449) 2783 665.5 3e-191
CCDS2438.1 TUBA4A gene_id:7277|Hs108|chr2 ( 448) 2782 665.3 3.5e-191
CCDS33290.1 TUBA3D gene_id:113457|Hs108|chr2 ( 450) 2781 665.0 4.2e-191
CCDS9284.1 TUBA3C gene_id:7278|Hs108|chr13 ( 450) 2781 665.0 4.2e-191
CCDS76556.1 TUBA1C gene_id:84790|Hs108|chr12 ( 519) 2776 663.9 1.1e-190
CCDS31792.1 TUBA1B gene_id:10376|Hs108|chr12 ( 451) 2774 663.4 1.3e-190
CCDS58227.1 TUBA1A gene_id:7846|Hs108|chr12 ( 451) 2772 662.9 1.8e-190
CCDS8781.1 TUBA1A gene_id:7846|Hs108|chr12 ( 451) 2772 662.9 1.8e-190
CCDS2158.1 TUBA3E gene_id:112714|Hs108|chr2 ( 450) 2727 652.3 2.9e-187
CCDS63131.1 TUBA4A gene_id:7277|Hs108|chr2 ( 433) 2679 641.0 7.1e-184
CCDS54495.1 TUBA8 gene_id:51807|Hs108|chr22 ( 383) 2553 611.2 5.7e-175
CCDS58226.1 TUBA1A gene_id:7846|Hs108|chr12 ( 416) 2541 608.4 4.4e-174
CCDS7066.2 TUBAL3 gene_id:79861|Hs108|chr10 ( 446) 2305 552.7 2.7e-157
CCDS53491.1 TUBAL3 gene_id:79861|Hs108|chr10 ( 406) 2095 503.2 2e-142
CCDS4687.1 TUBB gene_id:203068|Hs108|chr6 ( 444) 1262 306.6 3.2e-83
CCDS7039.1 TUBB4B gene_id:10383|Hs108|chr9 ( 445) 1251 304.0 1.9e-82
CCDS4484.1 TUBB2A gene_id:7280|Hs108|chr6 ( 445) 1240 301.4 1.2e-81
CCDS10988.1 TUBB3 gene_id:10381|Hs108|chr16 ( 450) 1239 301.2 1.4e-81
CCDS12168.1 TUBB4A gene_id:10382|Hs108|chr19 ( 444) 1238 301.0 1.6e-81
CCDS4485.1 TUBB2B gene_id:347733|Hs108|chr6 ( 445) 1238 301.0 1.6e-81
CCDS11858.1 TUBB6 gene_id:84617|Hs108|chr18 ( 446) 1235 300.3 2.7e-81
CCDS7051.1 TUBB8 gene_id:347688|Hs108|chr10 ( 444) 1220 296.7 3.1e-80
CCDS13475.1 TUBB1 gene_id:81027|Hs108|chr20 ( 451) 1186 288.7 8.1e-78
CCDS78124.1 TUBB gene_id:203068|Hs108|chr6 ( 372) 1058 258.5 8.5e-69
CCDS56012.1 TUBB3 gene_id:10381|Hs108|chr16 ( 378) 1053 257.3 2e-68
CCDS11433.1 TUBG1 gene_id:7283|Hs108|chr17 ( 451) 799 197.4 2.5e-50
CCDS32658.1 TUBG2 gene_id:27175|Hs108|chr17 ( 451) 792 195.7 7.8e-50
CCDS5100.1 TUBE1 gene_id:51175|Hs108|chr6 ( 475) 456 116.5 6e-26
CCDS54154.1 TUBD1 gene_id:51174|Hs108|chr17 ( 396) 400 103.2 4.9e-22
CCDS11620.1 TUBD1 gene_id:51174|Hs108|chr17 ( 453) 400 103.3 5.4e-22
CCDS54153.1 TUBD1 gene_id:51174|Hs108|chr17 ( 398) 387 100.2 4.1e-21
CCDS54152.1 TUBD1 gene_id:51174|Hs108|chr17 ( 351) 379 98.2 1.4e-20
CCDS77153.1 TUBB6 gene_id:84617|Hs108|chr18 ( 104) 245 66.3 1.7e-11
>>CCDS13751.1 TUBA8 gene_id:51807|Hs108|chr22 (449 aa)
initn: 3014 init1: 3014 opt: 3014 Z-score: 3841.5 bits: 720.0 E(32554): 1.2e-207
Smith-Waterman score: 3014; 100.0% identity (100.0% similar) in 449 aa overlap (1-449:1-449)
10 20 30 40 50 60
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
430 440
pF1KB8 AREDLAALEKDYEEVGTDSFEEENEGEEF
:::::::::::::::::::::::::::::
CCDS13 AREDLAALEKDYEEVGTDSFEEENEGEEF
430 440
>>CCDS8782.1 TUBA1C gene_id:84790|Hs108|chr12 (449 aa)
initn: 2783 init1: 2783 opt: 2783 Z-score: 3547.0 bits: 665.5 E(32554): 3e-191
Smith-Waterman score: 2783; 89.8% identity (97.1% similar) in 449 aa overlap (1-449:1-449)
10 20 30 40 50 60
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
::::::.::::::::::::::::.::::::: :: . .. . . ::::.::::::: ::
CCDS87 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
::::::..::::::.::::.:::::::::::::::::::::::::::::.::: ::::::
CCDS87 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
:::::.: :.::::::.:::::::::::::::::::::.::::::::::.::::::::::
CCDS87 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
:::::::::::::::::::::::::::::.::::.:::::::::::.:::::..:::: .
CCDS87 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.::::::::::::.:::.::::::::::::::::::::::::::
CCDS87 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
CCDS87 TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
430 440
pF1KB8 AREDLAALEKDYEEVGTDSFEEENEGEEF
::::.:::::::::::.:: . :.::::.
CCDS87 AREDMAALEKDYEEVGADSADGEDEGEEY
430 440
>>CCDS2438.1 TUBA4A gene_id:7277|Hs108|chr2 (448 aa)
initn: 2782 init1: 2782 opt: 2782 Z-score: 3545.7 bits: 665.3 E(32554): 3.5e-191
Smith-Waterman score: 2782; 90.0% identity (96.4% similar) in 448 aa overlap (1-448:1-448)
10 20 30 40 50 60
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
:::::::::::::::.:::::::.::::::: :: . .. . . :::::::: ::: ::
CCDS24 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
::::::..::::::.::.: : :::::::::::::::::::::::::::.::: :: :::
CCDS24 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
:::::.: :.::::::.:::::::::::::::::::::.::::::::::.::::::::::
CCDS24 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
:::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: .
CCDS24 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.::::::::::::.:::::::::.::::::::::::::::::::
CCDS24 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
430 440
pF1KB8 AREDLAALEKDYEEVGTDSFEEENEGEEF
::::.::::::::::: ::.:.:.::::
CCDS24 AREDMAALEKDYEEVGIDSYEDEDEGEE
430 440
>>CCDS33290.1 TUBA3D gene_id:113457|Hs108|chr2 (450 aa)
initn: 2768 init1: 2768 opt: 2781 Z-score: 3544.4 bits: 665.0 E(32554): 4.2e-191
Smith-Waterman score: 2781; 90.7% identity (96.9% similar) in 450 aa overlap (1-449:1-450)
10 20 30 40 50 60
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
::::::.::::::::::::::::.::::::: :: . .. . . ::::.::::::: ::
CCDS33 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
::::::..:::::::::::.:::::::::::::::::::::::::::::.::: .:::::
CCDS33 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
:::::.: :.:::::::::::::::::::.::::::::.:::::::::::::::::::::
CCDS33 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS33 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
:::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: .
CCDS33 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
:::::::::::::::::::::::::::::.:::.::::::::::::::::::::::::::
CCDS33 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
430 440
pF1KB8 AREDLAALEKDYEEVGTDSFEEE-NEGEEF
::::::::::::::::.:: : : .::::.
CCDS33 AREDLAALEKDYEEVGVDSVEAEAEEGEEY
430 440 450
>>CCDS9284.1 TUBA3C gene_id:7278|Hs108|chr13 (450 aa)
initn: 2768 init1: 2768 opt: 2781 Z-score: 3544.4 bits: 665.0 E(32554): 4.2e-191
Smith-Waterman score: 2781; 90.7% identity (96.9% similar) in 450 aa overlap (1-449:1-450)
10 20 30 40 50 60
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
::::::.::::::::::::::::.::::::: :: . .. . . ::::.::::::: ::
CCDS92 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
::::::..:::::::::::.:::::::::::::::::::::::::::::.::: .:::::
CCDS92 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
:::::.: :.:::::::::::::::::::.::::::::.:::::::::::::::::::::
CCDS92 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS92 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
:::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: .
CCDS92 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
:::::::::::::::::::::::::::::.:::.::::::::::::::::::::::::::
CCDS92 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
430 440
pF1KB8 AREDLAALEKDYEEVGTDSFEEE-NEGEEF
::::::::::::::::.:: : : .::::.
CCDS92 AREDLAALEKDYEEVGVDSVEAEAEEGEEY
430 440 450
>>CCDS76556.1 TUBA1C gene_id:84790|Hs108|chr12 (519 aa)
initn: 2776 init1: 2776 opt: 2776 Z-score: 3537.1 bits: 663.9 E(32554): 1.1e-190
Smith-Waterman score: 2776; 89.7% identity (97.1% similar) in 448 aa overlap (2-449:72-519)
10 20 30
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQ
:::::.::::::::::::::::.:::::::
CCDS76 IYFTRTLQLPAPFNTCTSSKSRGEPGCDSKRECISIHVGQAGVQIGNACWELYCLEHGIQ
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB8 ADGTFDAQASKINDDDSFTTFFSETGNGKHVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQ
:: . .. . . ::::.::::::: ::::::::..::::::.::::.:::::::::::
CCDS76 PDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQ
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB8 LITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTS
::::::::::::::::::.::: :::::::::::.: :.::::::.::::::::::::::
CCDS76 LITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTS
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB8 LLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD
:::::::.::::::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS76 LLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB8 ICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
CCDS76 ICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT
290 300 310 320 330 340
280 290 300 310 320 330
pF1KB8 YAPIISAEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVA
:::.:::::::::::.:::::..:::: .::::::::::::::::.::::::::::::.:
CCDS76 YAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAA
350 360 370 380 390 400
340 350 360 370 380 390
pF1KB8 IAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL
::.:::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
CCDS76 IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARL
410 420 430 440 450 460
400 410 420 430 440
pF1KB8 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFEEENEGEEF
:::::::::::::::::::::::::::::::::.:::::::::::.:: . :.::::.
CCDS76 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY
470 480 490 500 510
>>CCDS31792.1 TUBA1B gene_id:10376|Hs108|chr12 (451 aa)
initn: 2767 init1: 2767 opt: 2774 Z-score: 3535.5 bits: 663.4 E(32554): 1.3e-190
Smith-Waterman score: 2774; 89.8% identity (96.7% similar) in 451 aa overlap (1-449:1-451)
10 20 30 40 50 60
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
::::::.::::::::::::::::.::::::: :: . .. . . ::::.::::::: ::
CCDS31 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
::::::..::::::.::::.:::::::::::::::::::::::::::::.::: ::::::
CCDS31 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
:::::.: :.::::::.:::::::::::::::::::::.::::::::::.::::::::::
CCDS31 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
:::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: .
CCDS31 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.::::::::::::.:::.:::::.::::::::::::::::::::
CCDS31 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
430 440
pF1KB8 AREDLAALEKDYEEVGTDSFEEENE--GEEF
::::.:::::::::::.:: : :.: :::.
CCDS31 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
430 440 450
>>CCDS58227.1 TUBA1A gene_id:7846|Hs108|chr12 (451 aa)
initn: 2765 init1: 2765 opt: 2772 Z-score: 3532.9 bits: 662.9 E(32554): 1.8e-190
Smith-Waterman score: 2772; 89.8% identity (96.7% similar) in 451 aa overlap (1-449:1-451)
10 20 30 40 50 60
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
::::::.::::::::::::::::.::::::: :: . .. . . ::::.::::::: ::
CCDS58 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
::::::..::::::.::::.:::::::::::::::::::::::::::::.::: ::::::
CCDS58 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
:::::.: :.::::::.:::::::::::::::::::::.::::::::::.::::::::::
CCDS58 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS58 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
:::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: .
CCDS58 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.::::::::::::.:::.::::::::::::::::::::::::::
CCDS58 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
430 440
pF1KB8 AREDLAALEKDYEEVGTDSFEEENE--GEEF
::::.:::::::::::.:: : :.: :::.
CCDS58 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
430 440 450
>>CCDS8781.1 TUBA1A gene_id:7846|Hs108|chr12 (451 aa)
initn: 2765 init1: 2765 opt: 2772 Z-score: 3532.9 bits: 662.9 E(32554): 1.8e-190
Smith-Waterman score: 2772; 89.8% identity (96.7% similar) in 451 aa overlap (1-449:1-451)
10 20 30 40 50 60
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
::::::.::::::::::::::::.::::::: :: . .. . . ::::.::::::: ::
CCDS87 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
::::::..::::::.::::.:::::::::::::::::::::::::::::.::: ::::::
CCDS87 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
:::::.: :.::::::.:::::::::::::::::::::.::::::::::.::::::::::
CCDS87 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS87 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
:::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: .
CCDS87 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.::::::::::::.:::.::::::::::::::::::::::::::
CCDS87 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
430 440
pF1KB8 AREDLAALEKDYEEVGTDSFEEENE--GEEF
::::.:::::::::::.:: : :.: :::.
CCDS87 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
430 440 450
>>CCDS2158.1 TUBA3E gene_id:112714|Hs108|chr2 (450 aa)
initn: 2721 init1: 2721 opt: 2727 Z-score: 3475.6 bits: 652.3 E(32554): 2.9e-187
Smith-Waterman score: 2727; 89.3% identity (96.0% similar) in 450 aa overlap (1-449:1-450)
10 20 30 40 50 60
pF1KB8 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
::::::.::::::::::::::::.::::::: :: . .. . . ::::.::::::: ::
CCDS21 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
::::::..:::::::::::.::::::::::::::::::::.::::::::.::: .:::::
CCDS21 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
:::::.: :.:::::::::::::::::::.::::::::.::.::::::::::::::::::
CCDS21 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS21 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
:::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: .
CCDS21 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
:::::::::::::::::::::::::::::.:::.::::::::::::::::::::::::::
CCDS21 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
::::::::::::::::::::::::::::::: ::::::::: ::::::::::::::::::
CCDS21 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
430 440
pF1KB8 AREDLAALEKDYEEVGTDSFEEE-NEGEEF
::::::::::: ::::.:: : : .::: .
CCDS21 AREDLAALEKDCEEVGVDSVEAEAEEGEAY
430 440 450
449 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 13:11:54 2016 done: Fri Nov 4 13:11:54 2016
Total Scan time: 2.760 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]