FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8441, 160 aa
  1>>>pF1KB8441 160 - 160 aa - 160 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.5010+/-0.000642; mu= 16.8472+/- 0.039
 mean_var=58.0298+/-11.488, 0's: 0 Z-trim(110.2): 4  B-trim: 0 in 0/51
 Lambda= 0.168364
 statistics sampled from 11424 (11425) to 11424 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.741), E-opt: 0.2 (0.351), width:  16
 Scan time:  1.900

The best scores are:                                      opt bits E(32554)
CCDS14044.1 BIK gene_id:638|Hs108|chr22            ( 160) 1045 261.2   2e-70


>>CCDS14044.1 BIK gene_id:638|Hs108|chr22                 (160 aa)
 initn: 1045 init1: 1045 opt: 1045  Z-score: 1377.9  bits: 261.2 E(32554): 2e-70
Smith-Waterman score: 1045; 100.0% identity (100.0% similar) in 160 aa overlap (1-160:1-160)

               10        20        30        40        50        60
pF1KB8 MSEVRPLSRDILMETLLYEQLLEPPTMEVLGMTDSEEDLDPMEDFDSLECMEGSDALALR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MSEVRPLSRDILMETLLYEQLLEPPTMEVLGMTDSEEDLDPMEDFDSLECMEGSDALALR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 LACIGDEMDVSLRAPRLAQLSEVAMHSLGLAFIYDQTEDIRDVLRSFMDGFTTLKENIMR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LACIGDEMDVSLRAPRLAQLSEVAMHSLGLAFIYDQTEDIRDVLRSFMDGFTTLKENIMR
               70        80        90       100       110       120

              130       140       150       160
pF1KB8 FWRSPNPGSWVSCEQVLLALLLLLALLLPLLSGGLHLLLK
       ::::::::::::::::::::::::::::::::::::::::
CCDS14 FWRSPNPGSWVSCEQVLLALLLLLALLLPLLSGGLHLLLK
              130       140       150       160




160 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:55:11 2016 done: Fri Nov  4 12:55:12 2016
 Total Scan time:  1.900 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]