FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8427, 905 aa
  1>>>pF1KB8427 905 - 905 aa - 905 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.6010+/-0.00183; mu= -14.0844+/- 0.107
 mean_var=456.1942+/-92.849, 0's: 0 Z-trim(104.6): 70  B-trim: 0 in 0/53
 Lambda= 0.060048
 statistics sampled from 7988 (8000) to 7988 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.582), E-opt: 0.2 (0.246), width:  16
 Scan time:  3.800

The best scores are:                                      opt bits E(32554)
CCDS33812.1 KIAA1524 gene_id:57650|Hs108|chr3      ( 905) 5701 510.2 7.1e-144


>>CCDS33812.1 KIAA1524 gene_id:57650|Hs108|chr3           (905 aa)
 initn: 5701 init1: 5701 opt: 5701  Z-score: 2696.5  bits: 510.2 E(32554): 7.1e-144
Smith-Waterman score: 5701; 100.0% identity (100.0% similar) in 905 aa overlap (1-905:1-905)

               10        20        30        40        50        60
pF1KB8 MDSTACLKSLLLTVSQYKAVKSEANATQLLRHLEVISGQKLTRLFTSNQILTSECLSCLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MDSTACLKSLLLTVSQYKAVKSEANATQLLRHLEVISGQKLTRLFTSNQILTSECLSCLV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ELLEDPNISASLILSIIGLLSQLAVDIETRDCLQNTYNLNSVLAGVVCRSSHTDSVFLQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ELLEDPNISASLILSIIGLLSQLAVDIETRDCLQNTYNLNSVLAGVVCRSSHTDSVFLQC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 IQLLQKLTYNVKIFYSGANIDELITFLIDHIQSSEDELKMPCLGLLANLCRHNLSVQTHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 IQLLQKLTYNVKIFYSGANIDELITFLIDHIQSSEDELKMPCLGLLANLCRHNLSVQTHI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 KTLSNVKSFYRTLITLLAHSSLTVVVFALSILSSLTLNEEVGEKLFHARNIHQTFQLIFN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KTLSNVKSFYRTLITLLAHSSLTVVVFALSILSSLTLNEEVGEKLFHARNIHQTFQLIFN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 ILINGDGTLTRKYSVDLLMDLLKNPKIADYLTRYEHFSSCLHQVLGLLNGKDPDSSSKVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ILINGDGTLTRKYSVDLLMDLLKNPKIADYLTRYEHFSSCLHQVLGLLNGKDPDSSSKVL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 ELLLAFCSVTQLRHMLTQMMFEQSPPGSATLGSHTKCLEPTVALLRWLSQPLDGSENCSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ELLLAFCSVTQLRHMLTQMMFEQSPPGSATLGSHTKCLEPTVALLRWLSQPLDGSENCSV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 LALELFKEIFEDVIDAANCSSADRFVTLLLPTILDQLQFTEQNLDEALTRKKCERIAKAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LALELFKEIFEDVIDAANCSSADRFVTLLLPTILDQLQFTEQNLDEALTRKKCERIAKAI
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB8 EVLLTLCGDDTLKMHIAKILTTVKCTTLIEQQFTYGKIDLGFGTKVADSELCKLAADVIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EVLLTLCGDDTLKMHIAKILTTVKCTTLIEQQFTYGKIDLGFGTKVADSELCKLAADVIL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB8 KTLDLINKLKPLVPGMEVSFYKILQDPRLITPLAFALTSDNREQVQSGLRILLEAAPLPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KTLDLINKLKPLVPGMEVSFYKILQDPRLITPLAFALTSDNREQVQSGLRILLEAAPLPD
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB8 FPALVLGESIAANNAYRQQETEHIPRKMPWQSSNHSFPTSIKCLTPHLKDGVPGLNIEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FPALVLGESIAANNAYRQQETEHIPRKMPWQSSNHSFPTSIKCLTPHLKDGVPGLNIEEL
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB8 IEKLQSGMVVKDQICDVRISDIMDVYEMKLSTLASKESRLQDLLETKALALAQADRLIAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 IEKLQSGMVVKDQICDVRISDIMDVYEMKLSTLASKESRLQDLLETKALALAQADRLIAQ
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB8 HRCQRTQAETEARTLASMLREVERKNEELSVLLKAQQVESERAQSDIEHLFQHNRKLESV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HRCQRTQAETEARTLASMLREVERKNEELSVLLKAQQVESERAQSDIEHLFQHNRKLESV
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB8 AEEHEILTKSYMELLQRNESTEKKNKDLQITCDSLNKQIETVKKLNESLKEQNEKSIAQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AEEHEILTKSYMELLQRNESTEKKNKDLQITCDSLNKQIETVKKLNESLKEQNEKSIAQL
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB8 IEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKTLQKEREDKEETIDILRKELSRTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 IEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKTLQKEREDKEETIDILRKELSRTE
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB8 QIRKELSIKASSLEVQKAQLEGRLEEKESLVKLQQEELNKHSHMIAMIHSLSGGKINPET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QIRKELSIKASSLEVQKAQLEGRLEEKESLVKLQQEELNKHSHMIAMIHSLSGGKINPET
              850       860       870       880       890       900

            
pF1KB8 VNLSI
       :::::
CCDS33 VNLSI
            




905 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:49:01 2016 done: Fri Nov  4 12:49:02 2016
 Total Scan time:  3.800 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]