FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8268, 160 aa
  1>>>pF1KB8268 160 - 160 aa - 160 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.9097+/-0.00076; mu= 10.1765+/- 0.046
 mean_var=83.4271+/-16.207, 0's: 0 Z-trim(109.4): 8  B-trim: 0 in 0/52
 Lambda= 0.140417
 statistics sampled from 10858 (10862) to 10858 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.334), width:  16
 Scan time:  1.720

The best scores are:                                      opt bits E(32554)
CCDS10937.1 MPHOSPH6 gene_id:10200|Hs108|chr16     ( 160) 1032 218.0   2e-57


>>CCDS10937.1 MPHOSPH6 gene_id:10200|Hs108|chr16          (160 aa)
 initn: 1032 init1: 1032 opt: 1032  Z-score: 1144.4  bits: 218.0 E(32554): 2e-57
Smith-Waterman score: 1032; 99.4% identity (100.0% similar) in 160 aa overlap (1-160:1-160)

               10        20        30        40        50        60
pF1KB8 MAAERKTKLSKNLLRMKFMQRGLDSETKKQLEEEEKKIISEEHWYLDLPELKEKESFIIE
       :::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAAERKTRLSKNLLRMKFMQRGLDSETKKQLEEEEKKIISEEHWYLDLPELKEKESFIIE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EQSFLLCEDLLYGRMSFRGFNPEVEKLMLQMNAKHKAEEVEDETVELDVSDEEMARRYET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EQSFLLCEDLLYGRMSFRGFNPEVEKLMLQMNAKHKAEEVEDETVELDVSDEEMARRYET
               70        80        90       100       110       120

              130       140       150       160
pF1KB8 LVGTIGKKFARKRDHANYEEDENGDITPIKAKKMFLKPQD
       ::::::::::::::::::::::::::::::::::::::::
CCDS10 LVGTIGKKFARKRDHANYEEDENGDITPIKAKKMFLKPQD
              130       140       150       160




160 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 11:13:47 2016 done: Fri Nov  4 11:13:47 2016
 Total Scan time:  1.720 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]