Result of FASTA (omim) for
pF1KB8263
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8263, 321 aa
1>>>pF1KB8263 321 - 321 aa - 321 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5164+/-0.000602; mu= 1.9055+/- 0.037
mean_var=347.8493+/-70.590, 0's: 0 Z-trim(116.7): 187 B-trim: 819 in 2/54
Lambda= 0.068767
statistics sampled from 27949 (28162) to 27949 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.33), width: 16
Scan time: 5.380
The best scores are: opt bits E(85289)
NP_001427 (OMIM: 134795) rRNA 2'-O-methyltransfera ( 321) 2202 232.5 9.1e-61
XP_005258708 (OMIM: 134795) PREDICTED: rRNA 2'-O-m ( 320) 2182 230.5 3.6e-60
XP_011524925 (OMIM: 134795) PREDICTED: rRNA 2'-O-m ( 264) 1736 186.1 6.7e-47
NP_775882 (OMIM: 616142) protein FAM98B [Homo sapi ( 433) 317 45.6 0.00022
XP_016880670 (OMIM: 601574,612237) PREDICTED: TATA ( 323) 275 41.3 0.0033
XP_011523617 (OMIM: 601574,612237) PREDICTED: TATA ( 501) 275 41.6 0.0042
NP_003478 (OMIM: 601574,612237) TATA-binding prote ( 589) 275 41.7 0.0046
NP_631961 (OMIM: 601574,612237) TATA-binding prote ( 592) 275 41.7 0.0046
NP_001164408 (OMIM: 137070,608030,614782) RNA-bind ( 522) 264 40.5 0.0092
XP_011544083 (OMIM: 137070,608030,614782) PREDICTE ( 524) 264 40.5 0.0092
NP_001164105 (OMIM: 137070,608030,614782) RNA-bind ( 525) 264 40.5 0.0092
NP_004951 (OMIM: 137070,608030,614782) RNA-binding ( 526) 264 40.5 0.0092
NP_000217 (OMIM: 144200,607606) keratin, type I cy ( 623) 265 40.7 0.0095
>>NP_001427 (OMIM: 134795) rRNA 2'-O-methyltransferase f (321 aa)
initn: 2202 init1: 2202 opt: 2202 Z-score: 1211.9 bits: 232.5 E(85289): 9.1e-61
Smith-Waterman score: 2202; 100.0% identity (100.0% similar) in 321 aa overlap (1-321:1-321)
10 20 30 40 50 60
pF1KB8 MKPGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKPGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GGGFHSGGNRGRGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGFHSGGNRGRGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KRVSISEGDDKIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRVSISEGDDKIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 DQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLE
250 260 270 280 290 300
310 320
pF1KB8 PYERDHAVVVGVYRPPPKVKN
:::::::::::::::::::::
NP_001 PYERDHAVVVGVYRPPPKVKN
310 320
>>XP_005258708 (OMIM: 134795) PREDICTED: rRNA 2'-O-methy (320 aa)
initn: 1831 init1: 1831 opt: 2182 Z-score: 1201.2 bits: 230.5 E(85289): 3.6e-60
Smith-Waterman score: 2182; 99.7% identity (99.7% similar) in 321 aa overlap (1-321:1-320)
10 20 30 40 50 60
pF1KB8 MKPGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKPGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GGGFHSGGNRGRGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGE
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GG-FHSGGNRGRGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGE
70 80 90 100 110
130 140 150 160 170 180
pF1KB8 KRVSISEGDDKIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRVSISEGDDKIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 VGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 DQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLE
240 250 260 270 280 290
310 320
pF1KB8 PYERDHAVVVGVYRPPPKVKN
:::::::::::::::::::::
XP_005 PYERDHAVVVGVYRPPPKVKN
300 310 320
>>XP_011524925 (OMIM: 134795) PREDICTED: rRNA 2'-O-methy (264 aa)
initn: 1736 init1: 1736 opt: 1736 Z-score: 963.0 bits: 186.1 E(85289): 6.7e-47
Smith-Waterman score: 1736; 99.2% identity (99.6% similar) in 263 aa overlap (59-321:2-264)
30 40 50 60 70 80
pF1KB8 GFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKNVMV
. ::::::::::::::::::::::::::::
XP_011 MKPGGGFHSGGNRGRGRGGKRGNQSGKNVMV
10 20 30
90 100 110 120 130 140
pF1KB8 EPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLAAAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLAAAI
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 LGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRT
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 NIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANC
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 IDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYRPPPKVKN
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYRPPPKVKN
220 230 240 250 260
>>NP_775882 (OMIM: 616142) protein FAM98B [Homo sapiens] (433 aa)
initn: 741 init1: 274 opt: 317 Z-score: 199.9 bits: 45.6 E(85289): 0.00022
Smith-Waterman score: 317; 59.8% identity (68.3% similar) in 82 aa overlap (3-84:323-402)
10 20 30
pF1KB8 MKPGFSPRGGGFGGRGGFGDRGGRGGRGGFGG
: .. : : :::::.: :: ::::: ::
NP_775 TACAINKVLMGRVPDRGGRPNEIEPPPPEMPPWQKRQEGGGGRGGWGGGGGGGGRGGGGG
300 310 320 330 340 350
40 50 60 70 80 90
pF1KB8 GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKNVMVEPHR
: :::: : : :: ::::::::: :::: :: .::: : ::. .:.
NP_775 GGGRGG--WGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGY
360 370 380 390 400 410
100 110 120 130 140 150
pF1KB8 HEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLAAAILGGV
NP_775 GDPYGGGGGGGGGGGGGGGYRRY
420 430
>>XP_016880670 (OMIM: 601574,612237) PREDICTED: TATA-bin (323 aa)
initn: 214 init1: 214 opt: 275 Z-score: 178.7 bits: 41.3 E(85289): 0.0033
Smith-Waterman score: 316; 60.7% identity (71.9% similar) in 89 aa overlap (8-84:221-307)
10 20 30
pF1KB8 MKPGFSPRGGGFGG-RGGFG-DRGGRGG-RGGFGGGR
::::.:: :::.: :::: :: :::.:: :
XP_016 GGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDR
200 210 220 230 240 250
40 50 60 70 80
pF1KB8 GRGGGFRGRG-----RGGGGGGGG---GG-GGGRGGGGFHSGGNRGRGRGGKRGNQSGKN
: :: :.:: ::::.: :: :: :: :.:::. ::.:: : :: ::. .::
XP_016 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGY--GGDRGGGYGGDRGGYGGKM
260 270 280 290 300
90 100 110 120 130 140
pF1KB8 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA
XP_016 GGRNDYRNDQRNRPY
310 320
>--
initn: 692 init1: 204 opt: 285 Z-score: 184.0 bits: 42.3 E(85289): 0.0016
Smith-Waterman score: 285; 54.5% identity (70.5% similar) in 88 aa overlap (2-83:119-203)
10 20
pF1KB8 MKP-GFSPRGGGFGGRGGFGDRGGRGG-RGG
.: : . :: :.::. :. :::::: :::
XP_016 WVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGG
90 100 110 120 130 140
30 40 50 60 70 80
pF1KB8 FGGGRGRGGGFRG-RGRGGGGGG---GGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKN
.:: :. :::. : :. ::: .: ::: :: :.:::. ::.:: : :: ::. :
XP_016 YGGDRS-GGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGY--GGDRGGGYGGDRGGGYGGD
150 160 170 180 190 200
90 100 110 120 130 140
pF1KB8 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA
XP_016 RGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGD
210 220 230 240 250 260
>>XP_011523617 (OMIM: 601574,612237) PREDICTED: TATA-bin (501 aa)
initn: 214 init1: 214 opt: 275 Z-score: 176.7 bits: 41.6 E(85289): 0.0042
Smith-Waterman score: 316; 60.7% identity (71.9% similar) in 89 aa overlap (8-84:399-485)
10 20 30
pF1KB8 MKPGFSPRGGGFGG-RGGFG-DRGGRGG-RGGFGGGR
::::.:: :::.: :::: :: :::.:: :
XP_011 GGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDR
370 380 390 400 410 420
40 50 60 70 80
pF1KB8 GRGGGFRGRG-----RGGGGGGGG---GG-GGGRGGGGFHSGGNRGRGRGGKRGNQSGKN
: :: :.:: ::::.: :: :: :: :.:::. ::.:: : :: ::. .::
XP_011 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGY--GGDRGGGYGGDRGGYGGKM
430 440 450 460 470 480
90 100 110 120 130 140
pF1KB8 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA
XP_011 GGRNDYRNDQRNRPY
490 500
>--
initn: 692 init1: 204 opt: 285 Z-score: 182.0 bits: 42.6 E(85289): 0.0021
Smith-Waterman score: 285; 54.5% identity (70.5% similar) in 88 aa overlap (2-83:297-381)
10 20
pF1KB8 MKP-GFSPRGGGFGGRGGFGDRGGRGG-RGG
.: : . :: :.::. :. :::::: :::
XP_011 WVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGG
270 280 290 300 310 320
30 40 50 60 70 80
pF1KB8 FGGGRGRGGGFRG-RGRGGGGGG---GGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKN
.:: :. :::. : :. ::: .: ::: :: :.:::. ::.:: : :: ::. :
XP_011 YGGDRS-GGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGY--GGDRGGGYGGDRGGGYGGD
330 340 350 360 370 380
90 100 110 120 130 140
pF1KB8 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA
XP_011 RGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGD
390 400 410 420 430 440
>>NP_003478 (OMIM: 601574,612237) TATA-binding protein-a (589 aa)
initn: 214 init1: 214 opt: 275 Z-score: 175.9 bits: 41.7 E(85289): 0.0046
Smith-Waterman score: 316; 60.7% identity (71.9% similar) in 89 aa overlap (8-84:487-573)
10 20 30
pF1KB8 MKPGFSPRGGGFGG-RGGFG-DRGGRGG-RGGFGGGR
::::.:: :::.: :::: :: :::.:: :
NP_003 GGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDR
460 470 480 490 500 510
40 50 60 70 80
pF1KB8 GRGGGFRGRG-----RGGGGGGGG---GG-GGGRGGGGFHSGGNRGRGRGGKRGNQSGKN
: :: :.:: ::::.: :: :: :: :.:::. ::.:: : :: ::. .::
NP_003 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGY--GGDRGGGYGGDRGGYGGKM
520 530 540 550 560 570
90 100 110 120 130 140
pF1KB8 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA
NP_003 GGRNDYRNDQRNRPY
580
>--
initn: 692 init1: 204 opt: 285 Z-score: 181.3 bits: 42.7 E(85289): 0.0023
Smith-Waterman score: 285; 54.5% identity (70.5% similar) in 88 aa overlap (2-83:385-469)
10 20
pF1KB8 MKP-GFSPRGGGFGGRGGFGDRGGRGG-RGG
.: : . :: :.::. :. :::::: :::
NP_003 WVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGG
360 370 380 390 400 410
30 40 50 60 70 80
pF1KB8 FGGGRGRGGGFRG-RGRGGGGGG---GGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKN
.:: :. :::. : :. ::: .: ::: :: :.:::. ::.:: : :: ::. :
NP_003 YGGDRS-GGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGY--GGDRGGGYGGDRGGGYGGD
420 430 440 450 460 470
90 100 110 120 130 140
pF1KB8 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA
NP_003 RGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGD
480 490 500 510 520 530
>>NP_631961 (OMIM: 601574,612237) TATA-binding protein-a (592 aa)
initn: 214 init1: 214 opt: 275 Z-score: 175.9 bits: 41.7 E(85289): 0.0046
Smith-Waterman score: 316; 60.7% identity (71.9% similar) in 89 aa overlap (8-84:490-576)
10 20 30
pF1KB8 MKPGFSPRGGGFGG-RGGFG-DRGGRGG-RGGFGGGR
::::.:: :::.: :::: :: :::.:: :
NP_631 GGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDR
460 470 480 490 500 510
40 50 60 70 80
pF1KB8 GRGGGFRGRG-----RGGGGGGGG---GG-GGGRGGGGFHSGGNRGRGRGGKRGNQSGKN
: :: :.:: ::::.: :: :: :: :.:::. ::.:: : :: ::. .::
NP_631 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGY--GGDRGGGYGGDRGGYGGKM
520 530 540 550 560 570
90 100 110 120 130 140
pF1KB8 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA
NP_631 GGRNDYRNDQRNRPY
580 590
>--
initn: 692 init1: 204 opt: 285 Z-score: 181.3 bits: 42.7 E(85289): 0.0023
Smith-Waterman score: 285; 54.5% identity (70.5% similar) in 88 aa overlap (2-83:388-472)
10 20
pF1KB8 MKP-GFSPRGGGFGGRGGFGDRGGRGG-RGG
.: : . :: :.::. :. :::::: :::
NP_631 WVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGG
360 370 380 390 400 410
30 40 50 60 70 80
pF1KB8 FGGGRGRGGGFRG-RGRGGGGGG---GGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKN
.:: :. :::. : :. ::: .: ::: :: :.:::. ::.:: : :: ::. :
NP_631 YGGDRS-GGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGY--GGDRGGGYGGDRGGGYGGD
420 430 440 450 460 470
90 100 110 120 130 140
pF1KB8 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA
NP_631 RGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGD
480 490 500 510 520 530
>>NP_001164408 (OMIM: 137070,608030,614782) RNA-binding (522 aa)
initn: 883 init1: 214 opt: 264 Z-score: 170.6 bits: 40.5 E(85289): 0.0092
Smith-Waterman score: 264; 55.8% identity (75.3% similar) in 77 aa overlap (9-85:183-254)
10 20 30
pF1KB8 MKPGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGG
::: :: : :..: :: ::.: . :::
NP_001 QGYGQQNQYNSSSGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQ-QDRGG
160 170 180 190 200 210
40 50 60 70 80 90
pF1KB8 GFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKNVMVEPHRHEGVFI
:::: .:::::::::: .:..::.. : :: :::: ::...:..
NP_001 --RGRGGSGGGGGGGGGGYNRSSGGYEPRG-RGGGRGG-RGGMGGSDRGGFNKFGGPRDQ
220 230 240 250 260
100 110 120 130 140 150
pF1KB8 CRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLAAAILGGVDQIHIK
NP_001 GSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETG
270 280 290 300 310 320
>>XP_011544083 (OMIM: 137070,608030,614782) PREDICTED: R (524 aa)
initn: 883 init1: 214 opt: 264 Z-score: 170.6 bits: 40.5 E(85289): 0.0092
Smith-Waterman score: 266; 51.7% identity (67.4% similar) in 89 aa overlap (6-83:163-251)
10 20 30
pF1KB8 MKPGFSPRGGGFGGRGGFG-DRGGRGGRGGFGGGR
: ::: :: :..: :... .. :: :::
XP_011 QPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGNYGQDQSSMSSGGGSGGGY
140 150 160 170 180 190
40 50 60 70 80
pF1KB8 GR-----GGGFRGRG---RGGGGGGGGGGGGGRGGGGFH--SGGNRGRGRGGKRGNQSGK
: ::: : : ::: : ::.::::: ::::.. ::: . ::::: ::...:
XP_011 GNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGM
200 210 220 230 240 250
90 100 110 120 130 140
pF1KB8 NVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKL
XP_011 GGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTN
260 270 280 290 300 310
321 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:08:56 2016 done: Fri Nov 4 11:08:57 2016
Total Scan time: 5.380 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]