Result of FASTA (omim) for
pF1KB8235
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8235, 220 aa
1>>>pF1KB8235 220 - 220 aa - 220 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7578+/-0.000441; mu= 17.1346+/- 0.028
mean_var=86.6444+/-17.207, 0's: 0 Z-trim(112.2): 451 B-trim: 108 in 1/49
Lambda= 0.137786
statistics sampled from 20548 (21084) to 20548 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.247), width: 16
Scan time: 4.580
The best scores are: opt bits E(85289)
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 1464 300.9 1.1e-81
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 1464 300.9 1.1e-81
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 1257 259.8 2.6e-69
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 1257 259.8 2.7e-69
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 1172 242.9 3.2e-64
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 1172 242.9 3.2e-64
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 1157 239.9 2.5e-63
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 694 147.8 1.2e-35
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 676 144.3 1.5e-34
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 672 143.5 2.5e-34
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 643 137.7 1.3e-32
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 643 137.7 1.4e-32
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 613 131.7 8.4e-31
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 611 131.3 1.1e-30
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 590 127.2 2.3e-29
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 567 122.6 4.8e-28
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 526 114.5 1.4e-25
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 519 113.1 3.8e-25
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 518 112.9 4.8e-25
XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237) 517 112.7 5.2e-25
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 515 112.3 6.4e-25
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 513 111.9 8.5e-25
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 512 111.6 9.2e-25
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 512 111.7 9.8e-25
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 512 111.7 1e-24
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 511 111.4 1.1e-24
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 511 111.4 1.1e-24
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 511 111.4 1.1e-24
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 511 111.4 1.1e-24
XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 511 111.9 1.9e-24
XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 511 111.9 1.9e-24
NP_001138430 (OMIM: 614178) EF-hand calcium-bindin ( 731) 511 112.1 2.5e-24
XP_006719084 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 511 112.1 2.5e-24
XP_011519336 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 511 112.1 2.5e-24
XP_011519338 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 511 112.1 2.5e-24
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 500 109.3 5e-24
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 499 109.1 5.9e-24
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 499 109.1 5.9e-24
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 490 107.2 1.9e-23
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 487 106.7 3e-23
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 485 106.3 3.9e-23
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 483 105.9 5.2e-23
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 481 105.5 7e-23
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 478 104.9 1e-22
XP_006722363 (OMIM: 616448) PREDICTED: ras-related ( 212) 473 103.9 2.1e-22
XP_011520750 (OMIM: 605455) PREDICTED: ras-related ( 231) 464 102.2 7.6e-22
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 463 101.9 8.4e-22
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 459 101.1 1.4e-21
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 453 99.9 3.1e-21
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194) 451 99.5 4.1e-21
>>XP_011526466 (OMIM: 179490) PREDICTED: ras-related pro (220 aa)
initn: 1464 init1: 1464 opt: 1464 Z-score: 1587.7 bits: 300.9 E(85289): 1.1e-81
Smith-Waterman score: 1464; 100.0% identity (100.0% similar) in 220 aa overlap (1-220:1-220)
10 20 30 40 50 60
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
130 140 150 160 170 180
190 200 210 220
pF1KB8 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
::::::::::::::::::::::::::::::::::::::::
XP_011 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
190 200 210 220
>>NP_002857 (OMIM: 179490) ras-related protein Rab-3A [H (220 aa)
initn: 1464 init1: 1464 opt: 1464 Z-score: 1587.7 bits: 300.9 E(85289): 1.1e-81
Smith-Waterman score: 1464; 100.0% identity (100.0% similar) in 220 aa overlap (1-220:1-220)
10 20 30 40 50 60
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
130 140 150 160 170 180
190 200 210 220
pF1KB8 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
::::::::::::::::::::::::::::::::::::::::
NP_002 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
190 200 210 220
>>NP_001304844 (OMIM: 612829) ras-related protein Rab-3C (225 aa)
initn: 1275 init1: 1164 opt: 1257 Z-score: 1365.2 bits: 259.8 E(85289): 2.6e-69
Smith-Waterman score: 1257; 84.1% identity (96.4% similar) in 220 aa overlap (1-220:7-225)
10 20 30 40 50
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVST
:::: :.:::::.:::::::::::.::::::::::::::::::::::: :::::
NP_001 MELYGKMASAQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVST
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 VGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQ
:::::::::...:.::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 DWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQ
::::::::::::::::.:::::::::::::.:.:::..:...:::::::.::::::::::
NP_001 DWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQ
130 140 150 160 170 180
180 190 200 210 220
pF1KB8 TFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
:::::::.::.::::::.: :::.:.:::. .:.. ::. .:::
NP_001 TFERLVDIICDKMSESLET-DPAITAAKQNTRLKETPPPPQPNCAC
190 200 210 220
>>NP_612462 (OMIM: 612829) ras-related protein Rab-3C is (227 aa)
initn: 1275 init1: 1164 opt: 1257 Z-score: 1365.2 bits: 259.8 E(85289): 2.7e-69
Smith-Waterman score: 1257; 84.1% identity (96.4% similar) in 220 aa overlap (1-220:9-227)
10 20 30 40 50
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFV
:::: :.:::::.:::::::::::.::::::::::::::::::::::: :::
NP_612 MRHEAPMQMASAQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 STVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNA
:::::::::::...:.::::::::::::::::::::::::::::::::::::::::::::
NP_612 STVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 VQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINV
::::::::::::::::::.:::::::::::::.:.:::..:...:::::::.::::::::
NP_612 VQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINV
130 140 150 160 170 180
180 190 200 210 220
pF1KB8 KQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
:::::::::.::.::::::.: :::.:.:::. .:.. ::. .:::
NP_612 KQTFERLVDIICDKMSESLET-DPAITAAKQNTRLKETPPPPQPNCAC
190 200 210 220
>>NP_002858 (OMIM: 179510) ras-related protein Rab-3B [H (219 aa)
initn: 1141 init1: 1107 opt: 1172 Z-score: 1274.0 bits: 242.9 E(85289): 3.2e-64
Smith-Waterman score: 1172; 77.9% identity (95.0% similar) in 222 aa overlap (1-220:1-219)
10 20 30 40 50 60
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
:::.::.. : :..::::::::::.::::::::::::::::::::.::::::::::::::
NP_002 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
:::.::..::.:::::::::::::::::::::::::::::::::::::::::::::.:::
NP_002 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
::::::::::.:::::::::.:::: .:.:. ::..:::.:::::::.::.:.:.:::::
NP_002 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
130 140 150 160 170 180
190 200 210 220
pF1KB8 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPP--HQDCAC
:.::.:::.:::: ::.. :.... .::: .:: .:.:.:
NP_002 DAICDKMSDSLDT-DPSMLGSSKNTRLSD--TPPLLQQNCSC
190 200 210
>>XP_016857447 (OMIM: 179510) PREDICTED: ras-related pro (219 aa)
initn: 1141 init1: 1107 opt: 1172 Z-score: 1274.0 bits: 242.9 E(85289): 3.2e-64
Smith-Waterman score: 1172; 77.9% identity (95.0% similar) in 222 aa overlap (1-220:1-219)
10 20 30 40 50 60
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
:::.::.. : :..::::::::::.::::::::::::::::::::.::::::::::::::
XP_016 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
:::.::..::.:::::::::::::::::::::::::::::::::::::::::::::.:::
XP_016 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
::::::::::.:::::::::.:::: .:.:. ::..:::.:::::::.::.:.:.:::::
XP_016 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
130 140 150 160 170 180
190 200 210 220
pF1KB8 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPP--HQDCAC
:.::.:::.:::: ::.. :.... .::: .:: .:.:.:
XP_016 DAICDKMSDSLDT-DPSMLGSSKNTRLSD--TPPLLQQNCSC
190 200 210
>>NP_004274 (OMIM: 604350) ras-related protein Rab-3D [H (219 aa)
initn: 1175 init1: 1111 opt: 1157 Z-score: 1257.9 bits: 239.9 E(85289): 2.5e-63
Smith-Waterman score: 1157; 77.3% identity (92.7% similar) in 220 aa overlap (1-220:1-219)
10 20 30 40 50 60
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
:::: :.. : ....:::::::::.:.:::::::::::::::::::::::::::::::::
NP_004 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
:::.::.:::::::::::::::::::::::::::::::.:::::.:.::: :::::.:::
NP_004 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
::::::::::.:::::::.:::::: .: ::.::: :::::::::::.::::::.:::::
NP_004 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
130 140 150 160 170 180
190 200 210 220
pF1KB8 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
:::::::.:::. .. . ...: :: ..: .: ..:.:
NP_004 DVICEKMNESLEPSSSSGSNGK-GPAVGDAPAPQPSSCSC
190 200 210
>>NP_005361 (OMIM: 165040) ras-related protein Rab-8A [H (207 aa)
initn: 686 init1: 666 opt: 694 Z-score: 760.8 bits: 147.8 E(85289): 1.2e-35
Smith-Waterman score: 694; 52.6% identity (84.2% similar) in 196 aa overlap (17-211:3-196)
10 20 30 40 50 60
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
...::.::.:.::.:.:::: :::...:.:. .:.::.:::::
NP_005 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFK
10 20 30 40
70 80 90 100 110 120
pF1KB8 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
..:: . :::::::::::::::.:::::::::::::..:.::::::.::. ...: .:
NP_005 IRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
. .. ... ...:::::..:.: ::.:::..:: :..:.:.::: ::::...: :.
NP_005 EEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA
110 120 130 140 150 160
190 200 210 220
pF1KB8 DVICEKMSESLDTADPAVTGAKQGPQLS-DQQVPPHQDCAC
: ::...:. .: :..:: ... :::
NP_005 RDIKAKMDKKLEGNSP--QGSNQGVKITPDQQKRSSFFRCVLL
170 180 190 200
>>XP_011526322 (OMIM: 165040) PREDICTED: ras-related pro (215 aa)
initn: 684 init1: 664 opt: 676 Z-score: 741.3 bits: 144.3 E(85289): 1.5e-34
Smith-Waterman score: 676; 51.5% identity (82.5% similar) in 194 aa overlap (17-210:3-195)
10 20 30 40 50 60
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
...::.::.:.::.:.:::: :::...:.:. .:.::.:::::
XP_011 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFK
10 20 30 40
70 80 90 100 110 120
pF1KB8 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
..:: . :::::::::::::::.:::::::::::::..:.::::::.::. ...: .:
XP_011 IRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
. .. ... ...:::::..:.: ::.:::..:: :..:.:.::: ::::...: :.
XP_011 EEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA
110 120 130 140 150 160
190 200 210 220
pF1KB8 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
: ::...: : : .. : :...
XP_011 RDIKAKMDKKLGQKDNMVCKDRE-PWLGEKLPRSLGQGQGWCLITAGSSS
170 180 190 200 210
>>NP_057614 (OMIM: 613532) ras-related protein Rab-8B [H (207 aa)
initn: 663 init1: 643 opt: 672 Z-score: 737.2 bits: 143.5 E(85289): 2.5e-34
Smith-Waterman score: 672; 50.8% identity (85.2% similar) in 189 aa overlap (17-205:3-188)
10 20 30 40 50 60
pF1KB8 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
...::.::.:.::.:.:::: .:::...:.:. .:.::.:::::
NP_057 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFK
10 20 30 40
70 80 90 100 110 120
pF1KB8 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
..:: . :.:::::::::::::.:::::::::::::..:.::::::.::. ...: .:
NP_057 IRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
. .. .... ...::::::.:.: ::.:::..:: :..:.:.:::.. ::...: :.
NP_057 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLA
110 120 130 140 150 160
190 200 210 220
pF1KB8 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
: :...... .. : .: ::
NP_057 RDIMTKLNRKMNDSNSAGAG---GPVKITENRSKKTSFFRCSLL
170 180 190 200
220 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:50:09 2016 done: Fri Nov 4 10:50:10 2016
Total Scan time: 4.580 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]