Result of FASTA (ccds) for
pF1KB8197
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8197, 165 aa
1>>>pF1KB8197 165 - 165 aa - 165 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9454+/-0.000787; mu= 13.4612+/- 0.047
mean_var=58.6522+/-11.500, 0's: 0 Z-trim(106.8): 38 B-trim: 0 in 0/51
Lambda= 0.167468
statistics sampled from 9184 (9223) to 9184 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.283), width: 16
Scan time: 1.550
The best scores are: opt bits E(32554)
CCDS5494.1 PPIA gene_id:5478|Hs108|chr7 ( 165) 1130 281.0 2.2e-76
CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1 ( 164) 973 243.1 5.8e-65
CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1 ( 164) 966 241.4 1.9e-64
CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1 ( 164) 958 239.5 7.1e-64
CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1 ( 164) 954 238.5 1.4e-63
CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1 ( 164) 954 238.5 1.4e-63
CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1 ( 164) 946 236.6 5.3e-63
CCDS7358.1 PPIF gene_id:10105|Hs108|chr10 ( 207) 893 223.8 4.6e-59
CCDS443.1 PPIE gene_id:10450|Hs108|chr1 ( 301) 790 199.0 1.9e-51
CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2 (3224) 773 195.5 2.4e-49
CCDS75592.1 PPIA gene_id:5478|Hs108|chr7 ( 105) 720 181.9 1e-46
CCDS442.1 PPIE gene_id:10450|Hs108|chr1 ( 296) 716 181.2 4.6e-46
CCDS53299.1 PPIE gene_id:10450|Hs108|chr1 ( 314) 713 180.5 8e-46
CCDS10191.1 PPIB gene_id:5479|Hs108|chr15 ( 216) 699 177.0 6.1e-45
CCDS3801.1 PPID gene_id:5481|Hs108|chr4 ( 370) 659 167.4 7.8e-42
CCDS469.1 PPIH gene_id:10465|Hs108|chr1 ( 177) 620 157.8 2.9e-39
CCDS4133.1 PPIC gene_id:5480|Hs108|chr5 ( 212) 609 155.2 2.1e-38
CCDS2235.1 PPIG gene_id:9360|Hs108|chr2 ( 754) 558 143.2 3.1e-34
CCDS2702.1 NKTR gene_id:4820|Hs108|chr3 (1462) 547 140.7 3.4e-33
CCDS69169.1 PPIL6 gene_id:285755|Hs108|chr6 ( 279) 457 118.6 3e-27
CCDS5074.1 PPIL6 gene_id:285755|Hs108|chr6 ( 311) 457 118.6 3.3e-27
CCDS81308.1 PPIH gene_id:10465|Hs108|chr1 ( 134) 452 117.2 3.8e-27
CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6 ( 166) 432 112.4 1.3e-25
CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5 ( 490) 411 107.6 1.1e-23
CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5 ( 616) 411 107.7 1.3e-23
CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5 ( 646) 411 107.7 1.3e-23
CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2 ( 161) 392 102.7 1e-22
CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22 ( 520) 367 97.0 1.8e-20
CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22 ( 527) 367 97.0 1.8e-20
CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5 ( 381) 312 83.6 1.4e-16
CCDS3982.2 CWC27 gene_id:10283|Hs108|chr5 ( 472) 312 83.7 1.6e-16
CCDS2332.1 PPIL3 gene_id:53938|Hs108|chr2 ( 165) 296 79.5 1e-15
>>CCDS5494.1 PPIA gene_id:5478|Hs108|chr7 (165 aa)
initn: 1130 init1: 1130 opt: 1130 Z-score: 1484.8 bits: 281.0 E(32554): 2.2e-76
Smith-Waterman score: 1130; 100.0% identity (100.0% similar) in 165 aa overlap (1-165:1-165)
10 20 30 40 50 60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
70 80 90 100 110 120
130 140 150 160
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
:::::::::::::::::::::::::::::::::::::::::::::
CCDS54 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
130 140 150 160
>>CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1 (164 aa)
initn: 991 init1: 973 opt: 973 Z-score: 1279.8 bits: 243.1 E(32554): 5.8e-65
Smith-Waterman score: 973; 86.6% identity (95.1% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
::: .:::::.:::.::::.:..:::::.::::::::::::::::: :::::::::::::
CCDS72 MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
::::::::: :::: ::::::::.:::.: :::: :::::::::::::::::::::::::
CCDS72 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE
70 80 90 100 110 120
130 140 150 160
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
:::::::.:::::: .:::::::.:: ::.:::::::::::::.
CCDS72 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1 (164 aa)
initn: 984 init1: 966 opt: 966 Z-score: 1270.7 bits: 241.4 E(32554): 1.9e-64
Smith-Waterman score: 966; 86.0% identity (95.1% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
::: .:::::.:::.::::.:..:::::. :::::::::::::::: :::::::::::::
CCDS76 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
:::::::::::::: ::::::::.:::.: :::: ::::::::::::::::::::.::::
CCDS76 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
70 80 90 100 110 120
130 140 150 160
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
:::::::.:::::: .:::::::.:: ::.:::::::::::::.
CCDS76 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1 (164 aa)
initn: 976 init1: 958 opt: 958 Z-score: 1260.2 bits: 239.5 E(32554): 7.1e-64
Smith-Waterman score: 958; 84.8% identity (94.5% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
::: ..::::.:::.::::.:.. ::::.::::::::::::::::: :::::::::::::
CCDS41 MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
::::::::. :::: ::::::::.:::.: :::: :::::::::::::::::::::::::
CCDS41 MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE
70 80 90 100 110 120
130 140 150 160
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
:::::::.:::::: .:::::::.:: ::.:::::::::::::.
CCDS41 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1 (164 aa)
initn: 972 init1: 954 opt: 954 Z-score: 1255.0 bits: 238.5 E(32554): 1.4e-63
Smith-Waterman score: 954; 84.8% identity (94.5% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
::: .:::.:. ::.::::.:..:::::.::::::::::::::::: :::::::::::::
CCDS76 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
::::::::: :::: ::::::::.:::.: :::: ::::::::::::::::::::.::::
CCDS76 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
70 80 90 100 110 120
130 140 150 160
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
:::::::.:::::: .:::::::.:: ::.:::::::::::::.
CCDS76 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1 (164 aa)
initn: 972 init1: 954 opt: 954 Z-score: 1255.0 bits: 238.5 E(32554): 1.4e-63
Smith-Waterman score: 954; 84.8% identity (94.5% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
::: .:::.:. ::.::::.:..:::::.::::::::::::::::: :::::::::::::
CCDS76 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
::::::::: :::: ::::::::.:::.: :::: ::::::::::::::::::::.::::
CCDS76 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
70 80 90 100 110 120
130 140 150 160
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
:::::::.:::::: .:::::::.:: ::.:::::::::::::.
CCDS76 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1 (164 aa)
initn: 964 init1: 946 opt: 946 Z-score: 1244.6 bits: 236.6 E(32554): 5.3e-63
Smith-Waterman score: 946; 84.1% identity (93.9% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
::: .:::.:. ::.::::.:..:::::.::::::::::::::::: :::::::::::::
CCDS59 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
::::::::: :::: ::::::::.:::.: :::: ::::::::::::::::::::.::::
CCDS59 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
70 80 90 100 110 120
130 140 150 160
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
:::::::.:::::: .::::: :.:: ::.:::::::::::::.
CCDS59 WLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS7358.1 PPIF gene_id:10105|Hs108|chr10 (207 aa)
initn: 893 init1: 893 opt: 893 Z-score: 1173.8 bits: 223.8 E(32554): 4.6e-59
Smith-Waterman score: 893; 76.5% identity (91.4% similar) in 162 aa overlap (3-164:45-206)
10 20 30
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKT
:: :..:. ..:.::::: .:: :: ::::
CCDS73 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 AENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKH
::::::: ::::::::::: :::.::.::::.:::: ::::::::::: .: :::: :::
CCDS73 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 TGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT
.:::.::::::::::::::::::: ::.::::::::::.:::::..:. .: :::..:.:
CCDS73 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
140 150 160 170 180 190
160
pF1KB8 SKKITIADCGQLE
::::.:.:::::
CCDS73 SKKIVITDCGQLS
200
>>CCDS443.1 PPIE gene_id:10450|Hs108|chr1 (301 aa)
initn: 806 init1: 790 opt: 790 Z-score: 1036.9 bits: 199.0 E(32554): 1.9e-51
Smith-Waterman score: 790; 67.7% identity (85.7% similar) in 161 aa overlap (3-163:139-299)
10 20 30
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKT
:: :..:: . ..: ::... : .: :: :
CCDS44 TLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMT
110 120 130 140 150 160
40 50 60 70 80 90
pF1KB8 AENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKH
::::: : : :::::.::: :::::: ::::::::: :::::::::::.::.::::::::
CCDS44 AENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKH
170 180 190 200 210 220
100 110 120 130 140 150
pF1KB8 TGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT
::::.:::::.::::::::::. ::.::::::::::.: ::..... .: ::..::
CCDS44 TGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKP
230 240 250 260 270 280
160
pF1KB8 SKKITIADCGQLE
..:. :::::.
CCDS44 KQKVIIADCGEYV
290 300
>>CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2 (3224 aa)
initn: 801 init1: 773 opt: 773 Z-score: 999.4 bits: 195.5 E(32554): 2.4e-49
Smith-Waterman score: 773; 66.7% identity (87.7% similar) in 162 aa overlap (3-164:3063-3224)
10 20 30
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKT
::.::::. .:::::::...:::.. ::.:
CCDS20 FKKTFEECQQNLMKLQKGHVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRT
3040 3050 3060 3070 3080 3090
40 50 60 70 80 90
pF1KB8 AENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKH
::::::: :::::::.:.: :::.:: :.:::::.:.:.::::.::::.::::::: .::
CCDS20 AENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKH
3100 3110 3120 3130 3140 3150
100 110 120 130 140 150
pF1KB8 TGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT
::::.::::: : :::.::: : :.: :: :::::: ::.::. :. .: ::: .:..
CCDS20 TGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSV
3160 3170 3180 3190 3200 3210
160
pF1KB8 SKKITIADCGQLE
..:::..:::.
CCDS20 CRRITITECGQI
3220
165 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:27:53 2016 done: Fri Nov 4 10:27:53 2016
Total Scan time: 1.550 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]