Result of FASTA (omim) for
pF1KB8195
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8195, 313 aa
1>>>pF1KB8195 313 - 313 aa - 313 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4792+/-0.00031; mu= 11.4677+/- 0.020
mean_var=105.9370+/-21.636, 0's: 0 Z-trim(118.3): 110 B-trim: 0 in 0/52
Lambda= 0.124609
statistics sampled from 31007 (31118) to 31007 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.365), width: 16
Scan time: 6.120
The best scores are: opt bits E(85289)
XP_011526480 (OMIM: 603419) PREDICTED: small gluta ( 313) 2043 377.4 2.1e-104
NP_003012 (OMIM: 603419) small glutamine-rich tetr ( 313) 2043 377.4 2.1e-104
NP_001191213 (OMIM: 600658) serine/threonine-prote ( 477) 271 58.9 2.3e-08
NP_006238 (OMIM: 600658) serine/threonine-protein ( 499) 271 59.0 2.4e-08
XP_016882424 (OMIM: 600658) PREDICTED: serine/thre ( 551) 271 59.0 2.6e-08
NP_006810 (OMIM: 605063) stress-induced-phosphopro ( 543) 256 56.3 1.6e-07
NP_001139547 (OMIM: 611477) RNA polymerase II-asso ( 631) 255 56.1 2.1e-07
NP_078880 (OMIM: 611477) RNA polymerase II-associa ( 665) 255 56.2 2.2e-07
NP_001269581 (OMIM: 605063) stress-induced-phospho ( 590) 254 56.0 2.3e-07
NP_001269582 (OMIM: 605063) stress-induced-phospho ( 519) 249 55.0 3.8e-07
XP_011515547 (OMIM: 603395,615505) PREDICTED: sper ( 487) 233 52.1 2.7e-06
NP_001139548 (OMIM: 611477) RNA polymerase II-asso ( 506) 231 51.8 3.5e-06
XP_011515543 (OMIM: 603395,615505) PREDICTED: sper ( 871) 233 52.3 4.2e-06
NP_003306 (OMIM: 601964) dnaJ homolog subfamily C ( 494) 223 50.3 9.3e-06
XP_011528324 (OMIM: 615098) PREDICTED: tetratricop (1390) 227 51.3 1.3e-05
XP_011528323 (OMIM: 615098) PREDICTED: tetratricop (1390) 227 51.3 1.3e-05
XP_011528322 (OMIM: 615098) PREDICTED: tetratricop (1400) 227 51.3 1.3e-05
XP_011528321 (OMIM: 615098) PREDICTED: tetratricop (1412) 227 51.3 1.3e-05
XP_016884162 (OMIM: 615098) PREDICTED: tetratricop (2451) 227 51.5 2.1e-05
XP_011528320 (OMIM: 615098) PREDICTED: tetratricop (2455) 227 51.5 2.1e-05
XP_005261462 (OMIM: 615098) PREDICTED: tetratricop (2473) 227 51.5 2.1e-05
NP_001138890 (OMIM: 615098) tetratricopeptide repe (2481) 227 51.5 2.1e-05
NP_001269429 (OMIM: 601963) tetratricopeptide repe ( 292) 213 48.4 2.1e-05
NP_003305 (OMIM: 601963) tetratricopeptide repeat ( 292) 213 48.4 2.1e-05
NP_060338 (OMIM: 610732) tetratricopeptide repeat ( 705) 216 49.2 3e-05
XP_016873439 (OMIM: 610732) PREDICTED: tetratricop ( 753) 216 49.2 3.1e-05
XP_016873438 (OMIM: 610732) PREDICTED: tetratricop ( 755) 216 49.2 3.1e-05
XP_016873437 (OMIM: 610732) PREDICTED: tetratricop ( 760) 216 49.2 3.2e-05
XP_016873436 (OMIM: 610732) PREDICTED: tetratricop ( 774) 216 49.2 3.2e-05
XP_016873433 (OMIM: 610732) PREDICTED: tetratricop ( 777) 216 49.2 3.2e-05
XP_016873432 (OMIM: 610732) PREDICTED: tetratricop ( 777) 216 49.2 3.2e-05
XP_016873434 (OMIM: 610732) PREDICTED: tetratricop ( 777) 216 49.2 3.2e-05
XP_005271661 (OMIM: 610732) PREDICTED: tetratricop ( 777) 216 49.2 3.2e-05
XP_016873435 (OMIM: 610732) PREDICTED: tetratricop ( 777) 216 49.2 3.2e-05
XP_011523471 (OMIM: 601964) PREDICTED: dnaJ homolo ( 438) 211 48.1 3.8e-05
XP_011523469 (OMIM: 601964) PREDICTED: dnaJ homolo ( 438) 211 48.1 3.8e-05
XP_011523470 (OMIM: 601964) PREDICTED: dnaJ homolo ( 438) 211 48.1 3.8e-05
NP_001138238 (OMIM: 601964) dnaJ homolog subfamily ( 438) 211 48.1 3.8e-05
XP_016880483 (OMIM: 601964) PREDICTED: dnaJ homolo ( 438) 211 48.1 3.8e-05
NP_005852 (OMIM: 607207,615768) E3 ubiquitin-prote ( 303) 208 47.5 4.1e-05
NP_570722 (OMIM: 127700,608706,615482) dyslexia su ( 420) 204 46.9 8.7e-05
NP_001305462 (OMIM: 610732) tetratricopeptide repe ( 711) 198 45.9 0.00028
XP_016869244 (OMIM: 603395,615505) PREDICTED: sper ( 814) 197 45.8 0.00036
XP_011515542 (OMIM: 603395,615505) PREDICTED: sper ( 875) 197 45.8 0.00038
XP_011515545 (OMIM: 603395,615505) PREDICTED: sper ( 926) 197 45.8 0.0004
XP_011515544 (OMIM: 603395,615505) PREDICTED: sper ( 926) 197 45.8 0.0004
NP_003105 (OMIM: 603395,615505) sperm-associated a ( 926) 197 45.8 0.0004
NP_757367 (OMIM: 603395,615505) sperm-associated a ( 926) 197 45.8 0.0004
XP_016869243 (OMIM: 603395,615505) PREDICTED: sper ( 961) 197 45.8 0.00041
NP_071393 (OMIM: 617076) FK506-binding protein-lik ( 349) 190 44.3 0.00043
>>XP_011526480 (OMIM: 603419) PREDICTED: small glutamine (313 aa)
initn: 2043 init1: 2043 opt: 2043 Z-score: 1995.5 bits: 377.4 E(85289): 2.1e-104
Smith-Waterman score: 2043; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313)
10 20 30 40 50 60
pF1KB8 MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 YYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIR
250 260 270 280 290 300
310
pF1KB8 SRTPSASNDDQQE
:::::::::::::
XP_011 SRTPSASNDDQQE
310
>>NP_003012 (OMIM: 603419) small glutamine-rich tetratri (313 aa)
initn: 2043 init1: 2043 opt: 2043 Z-score: 1995.5 bits: 377.4 E(85289): 2.1e-104
Smith-Waterman score: 2043; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313)
10 20 30 40 50 60
pF1KB8 MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 IFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 YYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIR
250 260 270 280 290 300
310
pF1KB8 SRTPSASNDDQQE
:::::::::::::
NP_003 SRTPSASNDDQQE
310
>>NP_001191213 (OMIM: 600658) serine/threonine-protein p (477 aa)
initn: 285 init1: 264 opt: 271 Z-score: 271.2 bits: 58.9 E(85289): 2.3e-08
Smith-Waterman score: 271; 36.1% identity (65.4% similar) in 133 aa overlap (64-196:2-133)
40 50 60 70 80 90
pF1KB8 VAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAER
: : : : . . : ::.. .::.
NP_001 MAMAEG-ERTECAEPPRDEPPADGALKRAEE
10 20 30
100 110 120 130 140 150
pF1KB8 LKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAIC
:::..:. .:....: :..::..::::::.::.:. ::. :: . :. :. : :::
NP_001 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB8 IDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPT
.: : :.: : . . .:.: :. :. .... : .. :
NP_001 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFER
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB8 GGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDLASL
NP_001 AIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAY
160 170 180 190 200 210
>>NP_006238 (OMIM: 600658) serine/threonine-protein phos (499 aa)
initn: 285 init1: 264 opt: 271 Z-score: 270.9 bits: 59.0 E(85289): 2.4e-08
Smith-Waterman score: 271; 36.1% identity (65.4% similar) in 133 aa overlap (64-196:2-133)
40 50 60 70 80 90
pF1KB8 VAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAER
: : : : . . : ::.. .::.
NP_006 MAMAEG-ERTECAEPPRDEPPADGALKRAEE
10 20 30
100 110 120 130 140 150
pF1KB8 LKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAIC
:::..:. .:....: :..::..::::::.::.:. ::. :: . :. :. : :::
NP_006 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB8 IDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPT
.: : :.: : . . .:.: :. :. .... : .. :
NP_006 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFER
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB8 GGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDLASL
NP_006 AIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAY
160 170 180 190 200 210
>>XP_016882424 (OMIM: 600658) PREDICTED: serine/threonin (551 aa)
initn: 264 init1: 264 opt: 271 Z-score: 270.3 bits: 59.0 E(85289): 2.6e-08
Smith-Waterman score: 271; 36.1% identity (65.4% similar) in 133 aa overlap (64-196:2-133)
40 50 60 70 80 90
pF1KB8 VAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAER
: : : : . . : ::.. .::.
XP_016 MAMAEG-ERTECAEPPRDEPPADGALKRAEE
10 20 30
100 110 120 130 140 150
pF1KB8 LKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAIC
:::..:. .:....: :..::..::::::.::.:. ::. :: . :. :. : :::
XP_016 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB8 IDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPT
.: : :.: : . . .:.: :. :. .... : .. :
XP_016 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFER
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB8 GGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDLASL
XP_016 AIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAY
160 170 180 190 200 210
>>NP_006810 (OMIM: 605063) stress-induced-phosphoprotein (543 aa)
initn: 278 init1: 248 opt: 256 Z-score: 255.8 bits: 56.3 E(85289): 1.6e-07
Smith-Waterman score: 256; 29.8% identity (62.4% similar) in 178 aa overlap (90-265:3-173)
60 70 80 90 100 110
pF1KB8 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIE
....:: .::. ..: :.. :.. :..::.
NP_006 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK
10 20 30
120 130 140 150 160 170
pF1KB8 LNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAV
:.: : : . ::.:::.: :.: : .: ... . : ..:.:.: . :: ::. ::
NP_006 LDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAK
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB8 AYYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMN
:...:. . .: : .:. : .: : .. :.. .: .. . .:..
NP_006 RTYEEGLKHEANNPQLKEGLQNMEARLAERKF----MNPFNMPNLYQKLESDPRTRTLLS
100 110 120 130 140
240 250 260 270 280 290
pF1KB8 NPQIQQLMSGMISGGNNP--LGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRS
.: ..:. . :.: ::: .:
NP_006 DPTYRELIEQL---RNKPSDLGTKLQDPRIMTTLSVLLGVDLGSMDEEEEIATPPPPPPP
150 160 170 180 190 200
>--
initn: 231 init1: 231 opt: 249 Z-score: 249.0 bits: 55.0 E(85289): 3.9e-07
Smith-Waterman score: 249; 25.1% identity (64.3% similar) in 199 aa overlap (49-242:324-516)
20 30 40 50 60 70
pF1KB8 LRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSP
...:: .: :.... .... .. .
NP_006 EDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT-PDVLKKCQQAEKILKEQERL
300 310 320 330 340 350
80 90 100 110 120 130
pF1KB8 ARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKL
: : : : : :..::: .. .. :.. : .::. :: .: . :::: :.::
NP_006 AYINP---DLALEE--KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKL
360 370 380 390 400
140 150 160 170 180 190
pF1KB8 GNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN
.. :..:::. : ..:.. :.: : . :: ... ...:. :.:::.:: . . ..
NP_006 LEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADG
410 420 430 440 450 460
200 210 220 230 240 250
pF1KB8 LK---IAELKLREAPSPTG--GVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISG
. .:. . ...: . .... .. ....:.. . .....::
NP_006 YQRCMMAQYNRHDSPEDVKRRAMADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVI
470 480 490 500 510 520
260 270 280 290 300 310
pF1KB8 GNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQQE
NP_006 AQKIQKLMDVGLIAIR
530 540
>--
initn: 220 init1: 162 opt: 197 Z-score: 198.5 bits: 45.7 E(85289): 0.00026
Smith-Waterman score: 197; 32.0% identity (61.5% similar) in 122 aa overlap (72-182:202-323)
50 60 70 80 90
pF1KB8 AFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAER--LKTE--
: .. .. : ::: : .. :: .
NP_006 DPRIMTTLSVLLGVDLGSMDEEEEIATPPPPPPPKKETKPEPMEEDLPENKKQALKEKEL
180 190 200 210 220 230
100 110 120 130 140 150
pF1KB8 GNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA
::. .: ..:..:.. : :: ::.:.: .:. :.::.: . :.: . ::.:: .
NP_006 GNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE
240 250 260 270 280 290
160 170 180 190 200 210
pF1KB8 -------YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAP
.:::.:.: . . .:. .:. .:
NP_006 NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQER
300 310 320 330 340 350
220 230 240 250 260 270
pF1KB8 SPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDL
NP_006 LAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQ
360 370 380 390 400 410
>>NP_001139547 (OMIM: 611477) RNA polymerase II-associat (631 aa)
initn: 247 init1: 247 opt: 255 Z-score: 253.9 bits: 56.1 E(85289): 2.1e-07
Smith-Waterman score: 255; 33.1% identity (62.0% similar) in 163 aa overlap (52-212:96-256)
30 40 50 60 70 80
pF1KB8 GGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPART
: . . : :. . .: . . :. : ..
NP_001 KGKAKESSKKTREENTKNRIKSYDYEAWAKLDVDRILDELDKDDSTHESLSQE--SESEE
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB8 PPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNY
. :: .: :: .::. .: ... :. : :... .: : : :::.:: .: ..
NP_001 DGIHVDSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKF
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 AGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNL-K
: : .::. :. .. .:.:::.: : : .:.: :: :...:::.:.: ..: :
NP_001 AVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRK
190 200 210 220 230 240
210 220 230 240 250
pF1KB8 IAE-LKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLG
:.. : .: :
NP_001 ISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFFKEGKYERAIE
250 260 270 280 290 300
>--
initn: 233 init1: 212 opt: 236 Z-score: 235.4 bits: 52.7 E(85289): 2.2e-06
Smith-Waterman score: 236; 27.3% identity (58.0% similar) in 245 aa overlap (84-313:275-519)
60 70 80 90 100 110
pF1KB8 LPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHF
..... .: : .:: .: ..: :..
NP_001 SQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFFKEGKYERAIEC
250 260 270 280 290 300
120 130 140 150 160 170
pF1KB8 YGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN
: ..: . :::. ::: :: :. .: : .:: .:: .: .::::..: : : . :.
NP_001 YTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLG
310 320 330 340 350 360
180 190 200 210 220
pF1KB8 KHVEAVAYYKKALELDPDNETYKSNL-KIAELKLREAPSPTGG--VGSFDI------AGL
: :: .. .: :.: :. ..: :: . :... : . ..:. :.
NP_001 KLNEAKQDFETVLLLEPGNKQAVTELSKIKKKPLKKVIIEETGNLIQTIDVPDSTTAAAP
370 380 390 400 410 420
230 240 250 260 270 280
pF1KB8 LNNP-GFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLI-QAG--QQF
::: .. .. . .. . .. .. .. ...: . .: .:: ::. :.
NP_001 ENNPINLANVIAATGTTSKKNSSQDDLFPTSDTPRAKVLKIEEVSDTSSLQPQASLKQDV
430 440 450 460 470 480
290 300 310
pF1KB8 AQQMQQQNPELIEQLRSQIRSRT--PSASNDDQQE
:..... : ::: .:. . . : .:. : :
NP_001 CQSYSEKMPIEIEQKPAQFATTVLPPIPANSFQLESDFRQLKSSPDMLYQYLKQIEPSLY
490 500 510 520 530 540
NP_001 PKLFQKNLDPDVFNQIVKILHDFYIEKEKPLLIFEILQRLSELKRFDMAVMFMSETEKKI
550 560 570 580 590 600
>>NP_078880 (OMIM: 611477) RNA polymerase II-associated (665 aa)
initn: 247 init1: 247 opt: 255 Z-score: 253.6 bits: 56.2 E(85289): 2.2e-07
Smith-Waterman score: 255; 33.1% identity (62.0% similar) in 163 aa overlap (52-212:96-256)
30 40 50 60 70 80
pF1KB8 GGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPART
: . . : :. . .: . . :. : ..
NP_078 KGKAKESSKKTREENTKNRIKSYDYEAWAKLDVDRILDELDKDDSTHESLSQE--SESEE
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB8 PPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNY
. :: .: :: .::. .: ... :. : :... .: : : :::.:: .: ..
NP_078 DGIHVDSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKF
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 AGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNL-K
: : .::. :. .. .:.:::.: : : .:.: :: :...:::.:.: ..: :
NP_078 AVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRK
190 200 210 220 230 240
210 220 230 240 250
pF1KB8 IAE-LKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLG
:.. : .: :
NP_078 ISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFFKEGKYERAIE
250 260 270 280 290 300
>--
initn: 219 init1: 188 opt: 224 Z-score: 223.4 bits: 50.6 E(85289): 1e-05
Smith-Waterman score: 224; 27.0% identity (58.8% similar) in 211 aa overlap (84-288:275-483)
60 70 80 90 100 110
pF1KB8 LPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHF
..... .: : .:: .: ..: :..
NP_078 SQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFFKEGKYERAIEC
250 260 270 280 290 300
120 130 140 150 160 170
pF1KB8 YGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN
: ..: . :::. ::: :: :. .: : .:: .:: .: .::::..: : : . :.
NP_078 YTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLG
310 320 330 340 350 360
180 190 200 210 220
pF1KB8 KHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPTG----GVGSFDIAGLLNNPG
: :: .. .: :.: :. ..:. . .: : .. ... ..::
NP_078 KLNEAKQDFETVLLLEPGNKQAVTELSKIKKELIEKGHWDDVFLDSTQRQNVVKPIDNPP
370 380 390 400 410 420
230 240 250 260 270 280
pF1KB8 FMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQN--DLASLIQAGQQFAQQMQQQ
. .. : . : . ...:. . : .: ...: .: .::..: : ... ..:
NP_078 HPGSTKPL--KKVIIEETGNLIQTIDVPDSTTAAAPENNPINLANVIAATGTTSKKNSSQ
430 440 450 460 470 480
290 300 310
pF1KB8 NPELIEQLRSQIRSRTPSASNDDQQE
.
NP_078 DDLFPTSDTPRAKVLKIEEVSDTSSLQPQASLKQDVCQSYSEKMPIEIEQKPAQFATTVL
490 500 510 520 530 540
>>NP_001269581 (OMIM: 605063) stress-induced-phosphoprot (590 aa)
initn: 276 init1: 246 opt: 254 Z-score: 253.3 bits: 56.0 E(85289): 2.3e-07
Smith-Waterman score: 254; 30.5% identity (61.5% similar) in 174 aa overlap (94-265:54-220)
70 80 90 100 110 120
pF1KB8 AAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA
:: .::. ..: :.. :.. :..::.:.:
NP_001 RGYDWQCKRPIRVAEVRSSLHSWSLRWVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH
30 40 50 60 70 80
130 140 150 160 170 180
pF1KB8 NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYK
: : . ::.:::.: :.: : .: ... . : ..:.:.: . :: ::. :: :.
NP_001 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYE
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB8 KALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQI
..:. . .: : .:. : .: : .. :.. .: .. . .:...:
NP_001 EGLKHEANNPQLKEGLQNMEARLAERKF----MNPFNMPNLYQKLESDPRTRTLLSDPTY
150 160 170 180 190
250 260 270 280 290 300
pF1KB8 QQLMSGMISGGNNP--LGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRS
..:. . :.: ::: .:
NP_001 RELIEQL---RNKPSDLGTKLQDPRIMTTLSVLLGVDLGSMDEEEEIATPPPPPPPKKET
200 210 220 230 240 250
>--
initn: 231 init1: 231 opt: 249 Z-score: 248.5 bits: 55.1 E(85289): 4.2e-07
Smith-Waterman score: 249; 25.1% identity (64.3% similar) in 199 aa overlap (49-242:371-563)
20 30 40 50 60 70
pF1KB8 LRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSP
...:: .: :.... .... .. .
NP_001 EDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT-PDVLKKCQQAEKILKEQERL
350 360 370 380 390
80 90 100 110 120 130
pF1KB8 ARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKL
: : : : : :..::: .. .. :.. : .::. :: .: . :::: :.::
NP_001 AYINP---DLALEE--KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKL
400 410 420 430 440 450
140 150 160 170 180 190
pF1KB8 GNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN
.. :..:::. : ..:.. :.: : . :: ... ...:. :.:::.:: . . ..
NP_001 LEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADG
460 470 480 490 500 510
200 210 220 230 240 250
pF1KB8 LK---IAELKLREAPSPTG--GVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISG
. .:. . ...: . .... .. ....:.. . .....::
NP_001 YQRCMMAQYNRHDSPEDVKRRAMADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVI
520 530 540 550 560 570
260 270 280 290 300 310
pF1KB8 GNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQQE
NP_001 AQKIQKLMDVGLIAIR
580 590
>--
initn: 220 init1: 162 opt: 197 Z-score: 198.0 bits: 45.7 E(85289): 0.00027
Smith-Waterman score: 197; 32.0% identity (61.5% similar) in 122 aa overlap (72-182:249-370)
50 60 70 80 90
pF1KB8 AFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAER--LKTE--
: .. .. : ::: : .. :: .
NP_001 DPRIMTTLSVLLGVDLGSMDEEEEIATPPPPPPPKKETKPEPMEEDLPENKKQALKEKEL
220 230 240 250 260 270
100 110 120 130 140 150
pF1KB8 GNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA
::. .: ..:..:.. : :: ::.:.: .:. :.::.: . :.: . ::.:: .
NP_001 GNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE
280 290 300 310 320 330
160 170 180 190 200 210
pF1KB8 -------YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAP
.:::.:.: . . .:. .:. .:
NP_001 NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQER
340 350 360 370 380 390
220 230 240 250 260 270
pF1KB8 SPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDL
NP_001 LAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQ
400 410 420 430 440 450
>>NP_001269582 (OMIM: 605063) stress-induced-phosphoprot (519 aa)
initn: 231 init1: 231 opt: 249 Z-score: 249.3 bits: 55.0 E(85289): 3.8e-07
Smith-Waterman score: 249; 25.1% identity (64.3% similar) in 199 aa overlap (49-242:300-492)
20 30 40 50 60 70
pF1KB8 LRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSP
...:: .: :.... .... .. .
NP_001 EDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT-PDVLKKCQQAEKILKEQERL
270 280 290 300 310 320
80 90 100 110 120 130
pF1KB8 ARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKL
: : : : : :..::: .. .. :.. : .::. :: .: . :::: :.::
NP_001 AYINP---DLALEE--KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKL
330 340 350 360 370 380
140 150 160 170 180 190
pF1KB8 GNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN
.. :..:::. : ..:.. :.: : . :: ... ...:. :.:::.:: . . ..
NP_001 LEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADG
390 400 410 420 430 440
200 210 220 230 240 250
pF1KB8 LK---IAELKLREAPSPTG--GVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISG
. .:. . ...: . .... .. ....:.. . .....::
NP_001 YQRCMMAQYNRHDSPEDVKRRAMADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVI
450 460 470 480 490 500
260 270 280 290 300 310
pF1KB8 GNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQQE
NP_001 AQKIQKLMDVGLIAIR
510
>--
initn: 304 init1: 162 opt: 197 Z-score: 198.8 bits: 45.7 E(85289): 0.00025
Smith-Waterman score: 197; 32.0% identity (61.5% similar) in 122 aa overlap (72-182:178-299)
50 60 70 80 90
pF1KB8 AFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAER--LKTE--
: .. .. : ::: : .. :: .
NP_001 DPRIMTTLSVLLGVDLGSMDEEEEIATPPPPPPPKKETKPEPMEEDLPENKKQALKEKEL
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB8 GNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA
::. .: ..:..:.. : :: ::.:.: .:. :.::.: . :.: . ::.:: .
NP_001 GNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE
210 220 230 240 250 260
160 170 180 190 200 210
pF1KB8 -------YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAP
.:::.:.: . . .:. .:. .:
NP_001 NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQER
270 280 290 300 310 320
220 230 240 250 260 270
pF1KB8 SPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDL
NP_001 LAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQ
330 340 350 360 370 380
313 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:25:58 2016 done: Fri Nov 4 10:25:59 2016
Total Scan time: 6.120 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]