Result of FASTA (omim) for
pF1KB8123
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8123, 517 aa
1>>>pF1KB8123 517 - 517 aa - 517 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9971+/-0.000546; mu= 9.1018+/- 0.033
mean_var=158.1272+/-32.914, 0's: 0 Z-trim(111.4): 289 B-trim: 495 in 2/52
Lambda= 0.101993
statistics sampled from 19581 (19998) to 19581 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.601), E-opt: 0.2 (0.234), width: 16
Scan time: 7.790
The best scores are: opt bits E(85289)
NP_061840 (OMIM: 608714) gamma-1-syntrophin isofor ( 517) 3483 525.7 1.3e-148
XP_016869069 (OMIM: 608714) PREDICTED: gamma-1-syn ( 517) 3483 525.7 1.3e-148
XP_016869068 (OMIM: 608714) PREDICTED: gamma-1-syn ( 517) 3483 525.7 1.3e-148
NP_001308702 (OMIM: 608714) gamma-1-syntrophin iso ( 517) 3483 525.7 1.3e-148
NP_001274742 (OMIM: 608714) gamma-1-syntrophin iso ( 517) 3483 525.7 1.3e-148
XP_011515850 (OMIM: 608714) PREDICTED: gamma-1-syn ( 472) 3112 471.1 3.3e-132
NP_001274743 (OMIM: 608714) gamma-1-syntrophin iso ( 480) 2915 442.1 1.8e-123
NP_001308706 (OMIM: 608714) gamma-1-syntrophin iso ( 435) 2913 441.7 2e-123
NP_001308705 (OMIM: 608714) gamma-1-syntrophin iso ( 435) 2913 441.7 2e-123
NP_001308704 (OMIM: 608714) gamma-1-syntrophin iso ( 435) 2913 441.7 2e-123
NP_001308707 (OMIM: 608714) gamma-1-syntrophin iso ( 435) 2913 441.7 2e-123
XP_016869071 (OMIM: 608714) PREDICTED: gamma-1-syn ( 304) 1831 282.4 1.3e-75
XP_016869070 (OMIM: 608714) PREDICTED: gamma-1-syn ( 316) 1831 282.4 1.4e-75
XP_016859855 (OMIM: 608715) PREDICTED: gamma-2-syn ( 436) 1115 177.2 8.9e-44
XP_016859854 (OMIM: 608715) PREDICTED: gamma-2-syn ( 437) 1115 177.2 8.9e-44
XP_016859851 (OMIM: 608715) PREDICTED: gamma-2-syn ( 537) 1115 177.3 1e-43
XP_016859857 (OMIM: 608715) PREDICTED: gamma-2-syn ( 349) 1029 164.4 4.9e-40
XP_016859859 (OMIM: 608715) PREDICTED: gamma-2-syn ( 337) 1028 164.3 5.3e-40
XP_016859858 (OMIM: 608715) PREDICTED: gamma-2-syn ( 345) 1028 164.3 5.4e-40
XP_016859861 (OMIM: 608715) PREDICTED: gamma-2-syn ( 317) 914 147.5 5.7e-35
XP_016859860 (OMIM: 608715) PREDICTED: gamma-2-syn ( 317) 914 147.5 5.7e-35
XP_016859863 (OMIM: 608715) PREDICTED: gamma-2-syn ( 270) 669 111.4 3.6e-24
XP_016859862 (OMIM: 608715) PREDICTED: gamma-2-syn ( 314) 637 106.7 1e-22
XP_016859856 (OMIM: 608715) PREDICTED: gamma-2-syn ( 426) 637 106.8 1.3e-22
XP_011508668 (OMIM: 608715) PREDICTED: gamma-2-syn ( 426) 637 106.8 1.3e-22
XP_016859853 (OMIM: 608715) PREDICTED: gamma-2-syn ( 466) 637 106.9 1.4e-22
XP_016859852 (OMIM: 608715) PREDICTED: gamma-2-syn ( 480) 637 106.9 1.4e-22
NP_061841 (OMIM: 608715) gamma-2-syntrophin [Homo ( 539) 637 106.9 1.5e-22
XP_016859850 (OMIM: 608715) PREDICTED: gamma-2-syn ( 540) 637 106.9 1.5e-22
XP_011515541 (OMIM: 600026) PREDICTED: beta-1-synt ( 382) 296 56.6 1.5e-07
NP_066301 (OMIM: 600026) beta-1-syntrophin [Homo s ( 538) 296 56.8 2e-07
XP_011527310 (OMIM: 601017,612955) PREDICTED: alph ( 495) 282 54.7 7.7e-07
XP_011527309 (OMIM: 601017,612955) PREDICTED: alph ( 496) 282 54.7 7.7e-07
XP_005260574 (OMIM: 601017,612955) PREDICTED: alph ( 504) 282 54.7 7.8e-07
NP_003089 (OMIM: 601017,612955) alpha-1-syntrophin ( 505) 282 54.7 7.8e-07
NP_006741 (OMIM: 600027) beta-2-syntrophin [Homo s ( 540) 278 54.1 1.2e-06
NP_001017408 (OMIM: 606845) Golgi-associated PDZ a ( 454) 222 45.8 0.00033
NP_065132 (OMIM: 606845) Golgi-associated PDZ and ( 462) 222 45.8 0.00033
NP_001288057 (OMIM: 606382) membrane-associated gu (1441) 209 44.4 0.0028
NP_036433 (OMIM: 606382) membrane-associated guany (1455) 209 44.4 0.0028
XP_016868333 (OMIM: 606382) PREDICTED: membrane-as (1498) 209 44.4 0.0029
XP_011532543 (OMIM: 602625) PREDICTED: membrane-as ( 746) 198 42.5 0.0054
XP_011532542 (OMIM: 602625) PREDICTED: membrane-as ( 774) 198 42.5 0.0056
XP_016862995 (OMIM: 602625) PREDICTED: membrane-as (1276) 200 43.0 0.0065
NP_056335 (OMIM: 602625) membrane-associated guany (1287) 200 43.0 0.0065
XP_016862994 (OMIM: 602625) PREDICTED: membrane-as (1288) 200 43.0 0.0065
XP_016862993 (OMIM: 602625) PREDICTED: membrane-as (1288) 200 43.0 0.0065
XP_005265631 (OMIM: 602625) PREDICTED: membrane-as (1288) 200 43.0 0.0065
XP_016862991 (OMIM: 602625) PREDICTED: membrane-as (1289) 200 43.0 0.0065
XP_016862992 (OMIM: 602625) PREDICTED: membrane-as (1289) 200 43.0 0.0065
>>NP_061840 (OMIM: 608714) gamma-1-syntrophin isoform 1 (517 aa)
initn: 3483 init1: 3483 opt: 3483 Z-score: 2789.1 bits: 525.7 E(85289): 1.3e-148
Smith-Waterman score: 3483; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KB8 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
430 440 450 460 470 480
490 500 510
pF1KB8 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
:::::::::::::::::::::::::::::::::::::
NP_061 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
490 500 510
>>XP_016869069 (OMIM: 608714) PREDICTED: gamma-1-syntrop (517 aa)
initn: 3483 init1: 3483 opt: 3483 Z-score: 2789.1 bits: 525.7 E(85289): 1.3e-148
Smith-Waterman score: 3483; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KB8 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
430 440 450 460 470 480
490 500 510
pF1KB8 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
:::::::::::::::::::::::::::::::::::::
XP_016 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
490 500 510
>>XP_016869068 (OMIM: 608714) PREDICTED: gamma-1-syntrop (517 aa)
initn: 3483 init1: 3483 opt: 3483 Z-score: 2789.1 bits: 525.7 E(85289): 1.3e-148
Smith-Waterman score: 3483; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KB8 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
430 440 450 460 470 480
490 500 510
pF1KB8 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
:::::::::::::::::::::::::::::::::::::
XP_016 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
490 500 510
>>NP_001308702 (OMIM: 608714) gamma-1-syntrophin isoform (517 aa)
initn: 3483 init1: 3483 opt: 3483 Z-score: 2789.1 bits: 525.7 E(85289): 1.3e-148
Smith-Waterman score: 3483; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KB8 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
430 440 450 460 470 480
490 500 510
pF1KB8 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
:::::::::::::::::::::::::::::::::::::
NP_001 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
490 500 510
>>NP_001274742 (OMIM: 608714) gamma-1-syntrophin isoform (517 aa)
initn: 3483 init1: 3483 opt: 3483 Z-score: 2789.1 bits: 525.7 E(85289): 1.3e-148
Smith-Waterman score: 3483; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KB8 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
430 440 450 460 470 480
490 500 510
pF1KB8 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
:::::::::::::::::::::::::::::::::::::
NP_001 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
490 500 510
>>XP_011515850 (OMIM: 608714) PREDICTED: gamma-1-syntrop (472 aa)
initn: 3112 init1: 3112 opt: 3112 Z-score: 2494.6 bits: 471.1 E(85289): 3.3e-132
Smith-Waterman score: 3112; 100.0% identity (100.0% similar) in 463 aa overlap (55-517:10-472)
30 40 50 60 70 80
pF1KB8 FKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVV
::::::::::::::::::::::::::::::
XP_011 MDFRTACEEERTVTIRRQTVGGFGLSIKGGAEHNIPVVV
10 20 30
90 100 110 120 130 140
pF1KB8 SKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPA
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 FLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWC
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 DLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCTGIIQCLSAEDCVDWLQAIATNIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCTGIIQCLSAEDCVDWLQAIATNIS
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 NLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQDRVYSPTFLALRGSCLYKFLAPPVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQDRVYSPTFLALRGSCLYKFLAPPVT
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB8 TWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTVQSESGEDLYFSVELESDLAQWERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTVQSESGEDLYFSVELESDLAQWERA
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB8 FQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAVLWRYKFSQLKGSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAVLWRYKFSQLKGSSD
340 350 360 370 380 390
450 460 470 480 490 500
pF1KB8 DGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLFLGNQATASTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLFLGNQATASTA
400 410 420 430 440 450
510
pF1KB8 ASSATTSKAKYTT
:::::::::::::
XP_011 ASSATTSKAKYTT
460 470
>>NP_001274743 (OMIM: 608714) gamma-1-syntrophin isoform (480 aa)
initn: 2912 init1: 2912 opt: 2915 Z-score: 2337.8 bits: 442.1 E(85289): 1.8e-123
Smith-Waterman score: 3154; 92.8% identity (92.8% similar) in 517 aa overlap (1-517:1-480)
10 20 30 40 50 60
pF1KB8 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
:::::::: :::::::::::::::
NP_001 ICFDAATK-------------------------------------ELEFSNLFAVLHCIH
430 440
490 500 510
pF1KB8 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
:::::::::::::::::::::::::::::::::::::
NP_001 SFFAAKVACLDPLFLGNQATASTAASSATTSKAKYTT
450 460 470 480
>>NP_001308706 (OMIM: 608714) gamma-1-syntrophin isoform (435 aa)
initn: 2913 init1: 2913 opt: 2913 Z-score: 2336.8 bits: 441.7 E(85289): 2e-123
Smith-Waterman score: 2913; 99.5% identity (100.0% similar) in 430 aa overlap (1-430:1-430)
10 20 30 40 50 60
pF1KB8 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
::::::::..
NP_001 ICFDAATKVMCSGQL
430
>>NP_001308705 (OMIM: 608714) gamma-1-syntrophin isoform (435 aa)
initn: 2913 init1: 2913 opt: 2913 Z-score: 2336.8 bits: 441.7 E(85289): 2e-123
Smith-Waterman score: 2913; 99.5% identity (100.0% similar) in 430 aa overlap (1-430:1-430)
10 20 30 40 50 60
pF1KB8 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
::::::::..
NP_001 ICFDAATKVMCSGQL
430
>>NP_001308704 (OMIM: 608714) gamma-1-syntrophin isoform (435 aa)
initn: 2913 init1: 2913 opt: 2913 Z-score: 2336.8 bits: 441.7 E(85289): 2e-123
Smith-Waterman score: 2913; 99.5% identity (100.0% similar) in 430 aa overlap (1-430:1-430)
10 20 30 40 50 60
pF1KB8 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRQTVGGFGLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGIIQCLSAEDCVDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSESGEDLYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 ICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIH
::::::::..
NP_001 ICFDAATKVMCSGQL
430
517 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:44:35 2016 done: Fri Nov 4 09:44:36 2016
Total Scan time: 7.790 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]