Result of FASTA (ccds) for
pF1KB8101
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8101, 447 aa
1>>>pF1KB8101 447 - 447 aa - 447 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4771+/-0.00103; mu= 16.4588+/- 0.062
mean_var=62.8857+/-12.529, 0's: 0 Z-trim(102.6): 23 B-trim: 50 in 2/47
Lambda= 0.161733
statistics sampled from 7000 (7012) to 7000 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.58), E-opt: 0.2 (0.215), width: 16
Scan time: 2.750
The best scores are: opt bits E(32554)
CCDS35452.1 GDI1 gene_id:2664|Hs108|chrX ( 447) 2986 705.7 2.3e-203
CCDS7071.1 GDI2 gene_id:2665|Hs108|chr10 ( 445) 2642 625.5 3.3e-179
CCDS44352.1 GDI2 gene_id:2665|Hs108|chr10 ( 400) 1864 443.9 1.3e-124
CCDS31073.1 CHML gene_id:1122|Hs108|chr1 ( 656) 435 110.6 4.9e-24
CCDS14454.1 CHM gene_id:1121|Hs108|chrX ( 653) 399 102.2 1.7e-21
>>CCDS35452.1 GDI1 gene_id:2664|Hs108|chrX (447 aa)
initn: 2986 init1: 2986 opt: 2986 Z-score: 3764.5 bits: 705.7 E(32554): 2.3e-203
Smith-Waterman score: 2986; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)
10 20 30 40 50 60
pF1KB8 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 LSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 DPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDI
370 380 390 400 410 420
430 440
pF1KB8 YKRMAGTAFDFENMKRKQNDVFGEAEQ
:::::::::::::::::::::::::::
CCDS35 YKRMAGTAFDFENMKRKQNDVFGEAEQ
430 440
>>CCDS7071.1 GDI2 gene_id:2665|Hs108|chr10 (445 aa)
initn: 2642 init1: 2642 opt: 2642 Z-score: 3330.7 bits: 625.5 E(32554): 3.3e-179
Smith-Waterman score: 2642; 86.5% identity (96.8% similar) in 444 aa overlap (1-444:1-444)
10 20 30 40 50 60
pF1KB8 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE
:.:::::::::::::::::::::::::::::::::::::::::.::::::.:::::..
CCDS70 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP
.:::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
CCDS70 SPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD
:::.:::::.:::.:::::::::::.::::::.::.::::.::. :.:::::.:::::::
CCDS70 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
:::::::::::::::::::::: ::.::::::::::::::::::::::::::::::::::
CCDS70 VIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 LSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRI
::::::::::::::...::..::::.:::::::.::::::::::::. :::.:.:::::.
CCDS70 LSAIYGGTYMLNKPIEEIIVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETT
::::::::::::::::::::::::::::::::::::::.:::::::::::::.::::::
CCDS70 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 DPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDI
.::::..:::::::::.::::.:::: : : : :::.: : .:::::::::::.:::.:
CCDS70 EPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNI
370 380 390 400 410 420
430 440
pF1KB8 YKRMAGTAFDFENMKRKQNDVFGEAEQ
::::.:. ::::.::::.::..::
CCDS70 YKRMTGSEFDFEEMKRKKNDIYGED
430 440
>>CCDS44352.1 GDI2 gene_id:2665|Hs108|chr10 (400 aa)
initn: 1862 init1: 1862 opt: 1864 Z-score: 2350.4 bits: 443.9 E(32554): 1.3e-124
Smith-Waterman score: 2281; 77.0% identity (86.7% similar) in 444 aa overlap (1-444:1-399)
10 20 30 40 50 60
pF1KB8 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE
:.:::::::::::::::::::::::::::::::::::::::::.::::::.:::::..
CCDS44 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP
.::::::::::::::::::::::::
CCDS44 SPPESMGRGRDWNVDLIPKFLMANG-----------------------------------
70 80
130 140 150 160 170 180
pF1KB8 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD
:::.:::::::::::.::::::.::.::::.::. :.:::::.:::::::
CCDS44 ----------LMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQD
90 100 110 120 130
190 200 210 220 230 240
pF1KB8 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
:::::::::::::::::::::: ::.::::::::::::::::::::::::::::::::::
CCDS44 VIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB8 LSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRI
::::::::::::::...::..::::.:::::::.::::::::::::. :::.:.:::::.
CCDS44 LSAIYGGTYMLNKPIEEIIVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRV
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB8 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETT
::::::::::::::::::::::::::::::::::::::.:::::::::::::.::::::
CCDS44 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETK
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB8 DPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDI
.::::..:::::::::.::::.:::: : : : :::.: : .:::::::::::.:::.:
CCDS44 EPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNI
320 330 340 350 360 370
430 440
pF1KB8 YKRMAGTAFDFENMKRKQNDVFGEAEQ
::::.:. ::::.::::.::..::
CCDS44 YKRMTGSEFDFEEMKRKKNDIYGED
380 390 400
>>CCDS31073.1 CHML gene_id:1122|Hs108|chr1 (656 aa)
initn: 456 init1: 213 opt: 435 Z-score: 545.0 bits: 110.6 E(32554): 4.9e-24
Smith-Waterman score: 435; 25.1% identity (60.4% similar) in 331 aa overlap (69-389:226-546)
40 50 60 70 80 90
pF1KB8 YGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTR
:: .:.::. :.:...: :. .:. ..:.:
CCDS31 GDKDESKSTVEDKADEPIRNRITYSQIVKEGRRFNIDLVSKLLYSQGLLIDLLIKSDVSR
200 210 220 230 240 250
100 110 120 130 140 150
pF1KB8 YLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTF
:..:: : .... ::. .:: ...... :. . : ::: . :::.: ..... : .
CCDS31 YVEFKNVTRILAFREGKVEQVPCSRADVFNSKELTMVEKRMLMKFLTFCLEYEQH-PDEY
260 270 280 290 300 310
160 170 180 190 200 210
pF1KB8 EGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPC--LETVNRIKLYSESL
.. . :. . . : .. :. :..:. .. : .. .: : . . :
CCDS31 QAF--RQCSFSEYLKTKKLTPNLQHFVLHSIAMTS-----ESSCTTIDGLNATKNFLQCL
320 330 340 350 360
220 230 240 250 260 270
pF1KB8 ARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIM--ENGKVVGVKSE-GE
.:.:..:.:.:::: ::.:::: :. :..:: : : . :. ... :.:. .. .. :.
CCDS31 GRFGNTPFLFPLYGQGEIPQGFCRMCAVFGGIYCLRHKVQCFVVDKESGRCKAIIDHFGQ
370 380 390 400 410 420
280 290 300 310 320
pF1KB8 VARCKQLICDPSYIPDRV---RKAGQVIRIICILSHPIKNTN-DANSCQIIIPQNQVNRK
: .: . ::. ... . :. : . : .. : .:. : .. .:.: . .
CCDS31 RINAKYFIVEDSYLSEETCSNVQYKQISRAVLITDQSILKTDLDQQTSILIVPPAEPG-A
430 440 450 460 470 480
330 340 350 360 370 380
pF1KB8 SDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALE-LLEPIDQKFVAISDLYE
. : . . . . :. . : . ....: ... :. : . . .: .
CCDS31 CAVRVTELCSSTMTCMKDTYL-VHLTCSSSKTAREDLESVVKKLFTPYTETEINEEELTK
490 500 510 520 530 540
390 400 410 420 430 440
pF1KB8 PIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAGTAFDFENMKRKQNDVFGEAEQ
:
CCDS31 PRLLWALYFNMRDSSGISRSSYNGLPSNVYVCSGPDCGLGNEHAVKQAETLFQEIFPTEE
550 560 570 580 590 600
>>CCDS14454.1 CHM gene_id:1121|Hs108|chrX (653 aa)
initn: 498 init1: 203 opt: 399 Z-score: 499.6 bits: 102.2 E(32554): 1.7e-21
Smith-Waterman score: 399; 26.0% identity (59.9% similar) in 327 aa overlap (69-386:224-534)
40 50 60 70 80 90
pF1KB8 YGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTR
:: .:.::. :.:.. : :. .:. ..:.:
CCDS14 EDMSENVPIAEDTTEQPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSR
200 210 220 230 240 250
100 110 120 130 140 150
pF1KB8 YLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTF
: .:: . .... :.. .:: ...... :. . : ::: . :::.: .. :. : .
CCDS14 YAEFKNITRILAFREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCMEY-EKYPDEY
260 270 280 290 300 310
160 170 180 190 200 210
pF1KB8 EGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLAR
.: . : . . . : .. .. :..:. . . .. .. : . . :.:
CCDS14 KGYEEIT--FYEYLKTQKLTPNLQYIVMHSIAM---TSETASSTIDGLKATKNFLHCLGR
320 330 340 350 360
220 230 240 250 260 270
pF1KB8 YGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIM--ENGKVVGVKSE-GEVA
::..:.:.:::: ::::: : :. :..:: : : . :. ... :. : .. .. :.
CCDS14 YGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIIDQFGQRI
370 380 390 400 410 420
280 290 300 310 320 330
pF1KB8 RCKQLICDPSYIPD----RVRKAGQVIRIICILSHPIKNTNDANSCQII-IPQNQVNRKS
.... . ::.:. :: . :. : . : .. . .:.. .. .:. .: .. . .
CCDS14 ISEHFLVEDSYFPENMCSRV-QYRQISRAVLITDRSVLKTDSDQQISILTVPAEEPGTFA
430 440 450 460 470 480
340 350 360 370 380
pF1KB8 DIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELLEPIDQK-FVAISDLYEP
. : . . . .: :.. . : : : : :: . :: :: ...
CCDS14 -VRVIELCSSTMTCMKGTYLVHLTCTSSKT--------AREDLESVVQKLFVPYTEMEIE
490 500 510 520 530
390 400 410 420 430 440
pF1KB8 IDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAGTAFDFENMKRKQNDVFGEAEQ
CCDS14 NEQVEKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQAETLFQE
540 550 560 570 580 590
447 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:28:17 2016 done: Fri Nov 4 09:28:18 2016
Total Scan time: 2.750 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]