Result of FASTA (omim) for
pF1KB7959
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7959, 264 aa
1>>>pF1KB7959 264 - 264 aa - 264 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5809+/-0.000299; mu= 9.9406+/- 0.019
mean_var=104.3715+/-20.944, 0's: 0 Z-trim(120.4): 99 B-trim: 0 in 0/55
Lambda= 0.125540
statistics sampled from 35521 (35623) to 35521 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.418), width: 16
Scan time: 6.940
The best scores are: opt bits E(85289)
NP_945320 (OMIM: 600188) amino-terminal enhancer o ( 264) 1767 329.8 3.2e-90
XP_006722727 (OMIM: 600188) PREDICTED: amino-termi ( 263) 1748 326.3 3.5e-89
NP_001121 (OMIM: 600188) amino-terminal enhancer o ( 197) 1235 233.3 2.5e-61
NP_945321 (OMIM: 600188) amino-terminal enhancer o ( 196) 1216 229.9 2.7e-60
NP_001269682 (OMIM: 605132) transducin-like enhanc ( 704) 854 164.7 4.3e-40
XP_016870572 (OMIM: 605132) PREDICTED: transducin- ( 722) 854 164.7 4.4e-40
NP_008936 (OMIM: 605132) transducin-like enhancer ( 773) 854 164.7 4.7e-40
XP_011517268 (OMIM: 605132) PREDICTED: transducin- ( 798) 854 164.7 4.8e-40
NP_001269677 (OMIM: 605132) transducin-like enhanc ( 805) 854 164.7 4.8e-40
XP_011517262 (OMIM: 605132) PREDICTED: transducin- ( 830) 854 164.7 4.9e-40
XP_016870562 (OMIM: 605132) PREDICTED: transducin- ( 771) 853 164.5 5.3e-40
XP_016870570 (OMIM: 605132) PREDICTED: transducin- ( 748) 846 163.2 1.2e-39
XP_005252234 (OMIM: 605132) PREDICTED: transducin- ( 774) 846 163.2 1.3e-39
XP_011517267 (OMIM: 605132) PREDICTED: transducin- ( 799) 846 163.2 1.3e-39
XP_011517261 (OMIM: 605132) PREDICTED: transducin- ( 831) 846 163.2 1.3e-39
XP_016870561 (OMIM: 605132) PREDICTED: transducin- ( 772) 845 163.0 1.4e-39
XP_016870556 (OMIM: 605132) PREDICTED: transducin- ( 829) 845 163.1 1.5e-39
XP_006717326 (OMIM: 600189) PREDICTED: transducin- ( 768) 787 152.5 2.1e-36
XP_011517253 (OMIM: 600189) PREDICTED: transducin- ( 769) 787 152.5 2.1e-36
XP_005252211 (OMIM: 600189) PREDICTED: transducin- ( 803) 787 152.6 2.2e-36
NP_001290033 (OMIM: 600189) transducin-like enhanc ( 755) 779 151.1 5.6e-36
XP_006720728 (OMIM: 600190) PREDICTED: transducin- ( 763) 779 151.1 5.7e-36
XP_006717325 (OMIM: 600189) PREDICTED: transducin- ( 769) 779 151.1 5.7e-36
NP_005068 (OMIM: 600189) transducin-like enhancer ( 770) 779 151.1 5.7e-36
XP_011520282 (OMIM: 600190) PREDICTED: transducin- ( 771) 779 151.1 5.7e-36
XP_005252210 (OMIM: 600189) PREDICTED: transducin- ( 804) 779 151.1 5.9e-36
XP_005254690 (OMIM: 600190) PREDICTED: transducin- ( 755) 771 149.6 1.5e-35
NP_065959 (OMIM: 600190) transducin-like enhancer ( 760) 771 149.6 1.5e-35
NP_001269908 (OMIM: 600190) transducin-like enhanc ( 764) 771 149.6 1.5e-35
NP_001269909 (OMIM: 600190) transducin-like enhanc ( 767) 771 149.6 1.5e-35
NP_001098662 (OMIM: 600190) transducin-like enhanc ( 769) 771 149.6 1.6e-35
NP_005069 (OMIM: 600190) transducin-like enhancer ( 772) 771 149.6 1.6e-35
NP_001269910 (OMIM: 600190) transducin-like enhanc ( 762) 760 147.6 6.1e-35
XP_006722927 (OMIM: 601041) PREDICTED: transducin- ( 693) 692 135.3 2.9e-31
NP_001138233 (OMIM: 601041) transducin-like enhanc ( 706) 692 135.3 2.9e-31
XP_011526532 (OMIM: 601041) PREDICTED: transducin- ( 732) 692 135.3 3e-31
NP_001287775 (OMIM: 601041) transducin-like enhanc ( 744) 692 135.3 3.1e-31
NP_003251 (OMIM: 601041) transducin-like enhancer ( 743) 682 133.5 1.1e-30
XP_011517258 (OMIM: 605132) PREDICTED: transducin- ( 844) 634 124.9 4.9e-28
XP_016870560 (OMIM: 605132) PREDICTED: transducin- ( 786) 633 124.7 5.3e-28
XP_011517259 (OMIM: 605132) PREDICTED: transducin- ( 843) 633 124.7 5.6e-28
XP_011517272 (OMIM: 605132) PREDICTED: transducin- ( 650) 619 122.1 2.6e-27
XP_016870563 (OMIM: 605132) PREDICTED: transducin- ( 764) 619 122.1 3e-27
XP_011517271 (OMIM: 605132) PREDICTED: transducin- ( 771) 619 122.1 3e-27
XP_011517269 (OMIM: 605132) PREDICTED: transducin- ( 789) 619 122.1 3.1e-27
XP_006717331 (OMIM: 605132) PREDICTED: transducin- ( 815) 619 122.1 3.2e-27
XP_011517260 (OMIM: 605132) PREDICTED: transducin- ( 840) 619 122.1 3.2e-27
XP_006717327 (OMIM: 605132) PREDICTED: transducin- ( 847) 619 122.1 3.3e-27
XP_011517254 (OMIM: 605132) PREDICTED: transducin- ( 872) 619 122.1 3.3e-27
XP_011517255 (OMIM: 605132) PREDICTED: transducin- ( 870) 618 122.0 3.8e-27
>>NP_945320 (OMIM: 600188) amino-terminal enhancer of sp (264 aa)
initn: 1767 init1: 1767 opt: 1767 Z-score: 1740.8 bits: 329.8 E(85289): 3.2e-90
Smith-Waterman score: 1767; 100.0% identity (100.0% similar) in 264 aa overlap (1-264:1-264)
10 20 30 40 50 60
pF1KB7 MCHKNGFPQEGGITAAFLQKRKLRLSKNHRPARAKVTEHVRGTRPGRATAGPAASTRAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 MCHKNGFPQEGGITAAFLQKRKLRLSKNHRPARAKVTEHVRGTRPGRATAGPAASTRAAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 SLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 KSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 VTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQA
190 200 210 220 230 240
250 260
pF1KB7 HLSKEDKNGHDGDTHQEDDGEKSD
::::::::::::::::::::::::
NP_945 HLSKEDKNGHDGDTHQEDDGEKSD
250 260
>>XP_006722727 (OMIM: 600188) PREDICTED: amino-terminal (263 aa)
initn: 1294 init1: 1294 opt: 1748 Z-score: 1722.2 bits: 326.3 E(85289): 3.5e-89
Smith-Waterman score: 1748; 99.6% identity (99.6% similar) in 264 aa overlap (1-264:1-263)
10 20 30 40 50 60
pF1KB7 MCHKNGFPQEGGITAAFLQKRKLRLSKNHRPARAKVTEHVRGTRPGRATAGPAASTRAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MCHKNGFPQEGGITAAFLQKRKLRLSKNHRPARAKVTEHVRGTRPGRATAGPAASTRAAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQA
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VTAPELNSIIRQ-LQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQA
190 200 210 220 230
250 260
pF1KB7 HLSKEDKNGHDGDTHQEDDGEKSD
::::::::::::::::::::::::
XP_006 HLSKEDKNGHDGDTHQEDDGEKSD
240 250 260
>>NP_001121 (OMIM: 600188) amino-terminal enhancer of sp (197 aa)
initn: 1235 init1: 1235 opt: 1235 Z-score: 1221.9 bits: 233.3 E(85289): 2.5e-61
Smith-Waterman score: 1235; 100.0% identity (100.0% similar) in 188 aa overlap (77-264:10-197)
50 60 70 80 90 100
pF1KB7 RATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQ
::::::::::::::::::::::::::::::
NP_001 MMFPQSRHSGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQ
10 20 30
110 120 130 140 150 160
pF1KB7 YHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQE
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 HQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSA
100 110 120 130 140 150
230 240 250 260
pF1KB7 GTGLLSLSALGSQAHLSKEDKNGHDGDTHQEDDGEKSD
::::::::::::::::::::::::::::::::::::::
NP_001 GTGLLSLSALGSQAHLSKEDKNGHDGDTHQEDDGEKSD
160 170 180 190
>>NP_945321 (OMIM: 600188) amino-terminal enhancer of sp (196 aa)
initn: 762 init1: 762 opt: 1216 Z-score: 1203.3 bits: 229.9 E(85289): 2.7e-60
Smith-Waterman score: 1216; 99.5% identity (99.5% similar) in 188 aa overlap (77-264:10-196)
50 60 70 80 90 100
pF1KB7 RATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQ
::::::::::::::::::::::::::::::
NP_945 MMFPQSRHSGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQ
10 20 30
110 120 130 140 150 160
pF1KB7 YHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 YHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQE
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 HQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSA
:::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
NP_945 HQQQVLGAIERAKQVTAPELNSIIRQ-LQAHQLSQLQALALPLTPLPVGLQPPSLPAVSA
100 110 120 130 140 150
230 240 250 260
pF1KB7 GTGLLSLSALGSQAHLSKEDKNGHDGDTHQEDDGEKSD
::::::::::::::::::::::::::::::::::::::
NP_945 GTGLLSLSALGSQAHLSKEDKNGHDGDTHQEDDGEKSD
160 170 180 190
>>NP_001269682 (OMIM: 605132) transducin-like enhancer p (704 aa)
initn: 839 init1: 769 opt: 854 Z-score: 840.8 bits: 164.7 E(85289): 4.3e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)
50 60 70 80 90 100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
: . . : : : .::: :.::::::.::
NP_001 MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
10 20 30
110 120 130 140 150 160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
:.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
NP_001 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
:.:::::::::. :.::::::: :::.:: :::::..::. ..: .:::: : :::::.
NP_001 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
100 110 120 130 140 150
230 240 250 260
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD
.: .....:::.:: :::.:.:: :..:. ::.: ::.: :. ::
NP_001 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
160 170 180 190 200 210
NP_001 HRNSADYSSESKKQKTEEKEIAARYNEKSTTPVSKSNTPTPRTDAPTPGSNSTPGLRPVP
220 230 240 250 260 270
>>XP_016870572 (OMIM: 605132) PREDICTED: transducin-like (722 aa)
initn: 868 init1: 769 opt: 854 Z-score: 840.6 bits: 164.7 E(85289): 4.4e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)
50 60 70 80 90 100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
: . . : : : .::: :.::::::.::
XP_016 MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
10 20 30
110 120 130 140 150 160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
:.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
XP_016 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
:.:::::::::. :.::::::: :::.:: :::::..::. ..: .:::: : :::::.
XP_016 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
100 110 120 130 140 150
230 240 250 260
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD
.: .....:::.:: :::.:.:: :..:. ::.: ::.: :. ::
XP_016 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
160 170 180 190 200 210
XP_016 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNENEKSTTPVSKSNTPTPR
220 230 240 250 260 270
>>NP_008936 (OMIM: 605132) transducin-like enhancer prot (773 aa)
initn: 868 init1: 769 opt: 854 Z-score: 840.2 bits: 164.7 E(85289): 4.7e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)
50 60 70 80 90 100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
: . . : : : .::: :.::::::.::
NP_008 MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
10 20 30
110 120 130 140 150 160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
:.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
NP_008 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
:.:::::::::. :.::::::: :::.:: :::::..::. ..: .:::: : :::::.
NP_008 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
100 110 120 130 140 150
230 240 250 260
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD
.: .....:::.:: :::.:.:: :..:. ::.: ::.: :. ::
NP_008 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
160 170 180 190 200 210
NP_008 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENG
220 230 240 250 260 270
>>XP_011517268 (OMIM: 605132) PREDICTED: transducin-like (798 aa)
initn: 868 init1: 769 opt: 854 Z-score: 840.0 bits: 164.7 E(85289): 4.8e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)
50 60 70 80 90 100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
: . . : : : .::: :.::::::.::
XP_011 MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
10 20 30
110 120 130 140 150 160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
:.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
XP_011 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
:.:::::::::. :.::::::: :::.:: :::::..::. ..: .:::: : :::::.
XP_011 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
100 110 120 130 140 150
230 240 250 260
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD
.: .....:::.:: :::.:.:: :..:. ::.: ::.: :. ::
XP_011 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
160 170 180 190 200 210
XP_011 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENG
220 230 240 250 260 270
>>NP_001269677 (OMIM: 605132) transducin-like enhancer p (805 aa)
initn: 868 init1: 769 opt: 854 Z-score: 839.9 bits: 164.7 E(85289): 4.8e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)
50 60 70 80 90 100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
: . . : : : .::: :.::::::.::
NP_001 MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
10 20 30
110 120 130 140 150 160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
:.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
NP_001 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
:.:::::::::. :.::::::: :::.:: :::::..::. ..: .:::: : :::::.
NP_001 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
100 110 120 130 140 150
230 240 250 260
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD
.: .....:::.:: :::.:.:: :..:. ::.: ::.: :. ::
NP_001 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
160 170 180 190 200 210
NP_001 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENG
220 230 240 250 260 270
>>XP_011517262 (OMIM: 605132) PREDICTED: transducin-like (830 aa)
initn: 868 init1: 769 opt: 854 Z-score: 839.7 bits: 164.7 E(85289): 4.9e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)
50 60 70 80 90 100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
: . . : : : .::: :.::::::.::
XP_011 MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
10 20 30
110 120 130 140 150 160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
:.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
XP_011 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
:.:::::::::. :.::::::: :::.:: :::::..::. ..: .:::: : :::::.
XP_011 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
100 110 120 130 140 150
230 240 250 260
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD
.: .....:::.:: :::.:.:: :..:. ::.: ::.: :. ::
XP_011 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
160 170 180 190 200 210
XP_011 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENG
220 230 240 250 260 270
264 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:46:08 2016 done: Sat Nov 5 14:46:10 2016
Total Scan time: 6.940 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]