Result of FASTA (omim) for
pF1KB7954
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7954, 395 aa
1>>>pF1KB7954 395 - 395 aa - 395 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4807+/-0.000575; mu= 2.9686+/- 0.036
mean_var=278.1853+/-58.745, 0's: 0 Z-trim(115.1): 627 B-trim: 112 in 1/55
Lambda= 0.076897
statistics sampled from 24562 (25341) to 24562 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.297), width: 16
Scan time: 8.860
The best scores are: opt bits E(85289)
NP_005245 (OMIM: 600610) GA-binding protein subuni ( 395) 2479 288.9 1.4e-77
NP_001307839 (OMIM: 600610) GA-binding protein sub ( 395) 2479 288.9 1.4e-77
XP_005254331 (OMIM: 600610) PREDICTED: GA-binding ( 395) 2479 288.9 1.4e-77
NP_001307844 (OMIM: 600610) GA-binding protein sub ( 394) 2462 287.0 5.3e-77
NP_002032 (OMIM: 600610) GA-binding protein subuni ( 360) 2179 255.6 1.4e-67
NP_057738 (OMIM: 600610) GA-binding protein subuni ( 383) 1327 161.1 4.2e-39
XP_016877542 (OMIM: 600610) PREDICTED: GA-binding ( 383) 1327 161.1 4.2e-39
XP_016877543 (OMIM: 600610) PREDICTED: GA-binding ( 382) 1322 160.5 6.1e-39
XP_011519728 (OMIM: 600610) PREDICTED: GA-binding ( 382) 1322 160.5 6.1e-39
NP_852092 (OMIM: 600610) GA-binding protein subuni ( 348) 1287 156.6 8.5e-38
NP_057739 (OMIM: 600610) GA-binding protein subuni ( 348) 1287 156.6 8.5e-38
XP_016865993 (OMIM: 610583) PREDICTED: ankyrin rep ( 659) 317 49.3 3.2e-05
XP_011538517 (OMIM: 607128) PREDICTED: tankyrase-2 ( 695) 315 49.1 3.9e-05
XP_016865998 (OMIM: 610583) PREDICTED: ankyrin rep ( 626) 314 48.9 3.9e-05
XP_016872190 (OMIM: 607128) PREDICTED: tankyrase-2 ( 506) 311 48.5 4.3e-05
XP_016865987 (OMIM: 610583) PREDICTED: ankyrin rep ( 687) 311 48.7 5.2e-05
NP_001229742 (OMIM: 610583) ankyrin repeat domain- ( 692) 311 48.7 5.2e-05
NP_055757 (OMIM: 610583) ankyrin repeat domain-con ( 722) 311 48.7 5.4e-05
NP_001229740 (OMIM: 610583) ankyrin repeat domain- ( 727) 311 48.7 5.4e-05
NP_001229738 (OMIM: 610583) ankyrin repeat domain- ( 727) 311 48.7 5.4e-05
XP_005248738 (OMIM: 610583) PREDICTED: ankyrin rep ( 727) 311 48.7 5.4e-05
XP_016872188 (OMIM: 607128) PREDICTED: tankyrase-2 (1059) 311 48.9 6.9e-05
XP_016872187 (OMIM: 607128) PREDICTED: tankyrase-2 (1062) 311 48.9 6.9e-05
XP_016872186 (OMIM: 607128) PREDICTED: tankyrase-2 (1062) 311 48.9 6.9e-05
XP_016863599 (OMIM: 106410,600919) PREDICTED: anky (1763) 315 49.6 7.1e-05
XP_016863597 (OMIM: 106410,600919) PREDICTED: anky (1772) 315 49.6 7.1e-05
XP_016863596 (OMIM: 106410,600919) PREDICTED: anky (1797) 315 49.6 7.2e-05
XP_016863595 (OMIM: 106410,600919) PREDICTED: anky (1806) 315 49.6 7.2e-05
XP_016863592 (OMIM: 106410,600919) PREDICTED: anky (1816) 315 49.6 7.2e-05
XP_016863593 (OMIM: 106410,600919) PREDICTED: anky (1818) 315 49.6 7.2e-05
XP_016863590 (OMIM: 106410,600919) PREDICTED: anky (1839) 315 49.6 7.3e-05
XP_016863589 (OMIM: 106410,600919) PREDICTED: anky (1846) 315 49.6 7.3e-05
XP_016863588 (OMIM: 106410,600919) PREDICTED: anky (1850) 315 49.6 7.3e-05
XP_016863587 (OMIM: 106410,600919) PREDICTED: anky (1851) 315 49.6 7.3e-05
XP_016863586 (OMIM: 106410,600919) PREDICTED: anky (1858) 315 49.6 7.3e-05
XP_016863585 (OMIM: 106410,600919) PREDICTED: anky (1862) 315 49.6 7.3e-05
NP_001120965 (OMIM: 106410,600919) ankyrin-2 isofo (1863) 315 49.6 7.3e-05
NP_079511 (OMIM: 607128) tankyrase-2 [Homo sapiens (1166) 311 48.9 7.3e-05
XP_016863583 (OMIM: 106410,600919) PREDICTED: anky (1871) 315 49.6 7.4e-05
NP_066187 (OMIM: 106410,600919) ankyrin-2 isoform (1872) 315 49.6 7.4e-05
XP_016872185 (OMIM: 607128) PREDICTED: tankyrase-2 (1169) 311 48.9 7.4e-05
XP_016863580 (OMIM: 106410,600919) PREDICTED: anky (1879) 315 49.6 7.4e-05
XP_016863582 (OMIM: 106410,600919) PREDICTED: anky (1881) 315 49.6 7.4e-05
XP_016863581 (OMIM: 106410,600919) PREDICTED: anky (1882) 315 49.6 7.4e-05
XP_016863579 (OMIM: 106410,600919) PREDICTED: anky (1886) 315 49.6 7.4e-05
XP_016863578 (OMIM: 106410,600919) PREDICTED: anky (1887) 315 49.6 7.4e-05
XP_016863577 (OMIM: 106410,600919) PREDICTED: anky (1893) 315 49.6 7.4e-05
XP_016863576 (OMIM: 106410,600919) PREDICTED: anky (1898) 315 49.6 7.4e-05
XP_016863575 (OMIM: 106410,600919) PREDICTED: anky (1899) 315 49.6 7.4e-05
XP_016863574 (OMIM: 106410,600919) PREDICTED: anky (1902) 315 49.6 7.4e-05
>>NP_005245 (OMIM: 600610) GA-binding protein subunit be (395 aa)
initn: 2479 init1: 2479 opt: 2479 Z-score: 1513.6 bits: 288.9 E(85289): 1.4e-77
Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 395 aa overlap (1-395:1-395)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
310 320 330 340 350 360
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
:::::::::::::::::::::::::::::::::::
NP_005 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
370 380 390
>>NP_001307839 (OMIM: 600610) GA-binding protein subunit (395 aa)
initn: 2479 init1: 2479 opt: 2479 Z-score: 1513.6 bits: 288.9 E(85289): 1.4e-77
Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 395 aa overlap (1-395:1-395)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
310 320 330 340 350 360
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
:::::::::::::::::::::::::::::::::::
NP_001 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
370 380 390
>>XP_005254331 (OMIM: 600610) PREDICTED: GA-binding prot (395 aa)
initn: 2479 init1: 2479 opt: 2479 Z-score: 1513.6 bits: 288.9 E(85289): 1.4e-77
Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 395 aa overlap (1-395:1-395)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
310 320 330 340 350 360
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
:::::::::::::::::::::::::::::::::::
XP_005 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
370 380 390
>>NP_001307844 (OMIM: 600610) GA-binding protein subunit (394 aa)
initn: 1814 init1: 1560 opt: 2462 Z-score: 1503.4 bits: 287.0 E(85289): 5.3e-77
Smith-Waterman score: 2462; 99.7% identity (99.7% similar) in 395 aa overlap (1-395:1-394)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SETPV-ATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
250 260 270 280 290
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
300 310 320 330 340 350
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
:::::::::::::::::::::::::::::::::::
NP_001 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
360 370 380 390
>>NP_002032 (OMIM: 600610) GA-binding protein subunit be (360 aa)
initn: 2397 init1: 2179 opt: 2179 Z-score: 1334.2 bits: 255.6 E(85289): 1.4e-67
Smith-Waterman score: 2179; 99.1% identity (99.1% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::: : :
NP_002 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEVRSLLPGVLCRSHPK
310 320 330 340 350 360
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
>>NP_057738 (OMIM: 600610) GA-binding protein subunit be (383 aa)
initn: 1325 init1: 1260 opt: 1327 Z-score: 823.1 bits: 161.1 E(85289): 4.2e-39
Smith-Waterman score: 2378; 97.0% identity (97.0% similar) in 395 aa overlap (1-395:1-383)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
:::::::::::::: ::::::::::::::::::::::::::::::::::
NP_057 PQFIIGPGGVVNLT------------DETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
290 300 310 320 330 340
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
:::::::::::::::::::::::::::::::::::
NP_057 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
350 360 370 380
>>XP_016877542 (OMIM: 600610) PREDICTED: GA-binding prot (383 aa)
initn: 1325 init1: 1260 opt: 1327 Z-score: 823.1 bits: 161.1 E(85289): 4.2e-39
Smith-Waterman score: 2378; 97.0% identity (97.0% similar) in 395 aa overlap (1-395:1-383)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
:::::::::::::: ::::::::::::::::::::::::::::::::::
XP_016 PQFIIGPGGVVNLT------------DETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
290 300 310 320 330 340
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
:::::::::::::::::::::::::::::::::::
XP_016 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
350 360 370 380
>>XP_016877543 (OMIM: 600610) PREDICTED: GA-binding prot (382 aa)
initn: 2172 init1: 1260 opt: 1322 Z-score: 820.1 bits: 160.5 E(85289): 6.1e-39
Smith-Waterman score: 2361; 96.7% identity (96.7% similar) in 395 aa overlap (1-395:1-382)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
:::::::::::::: ::::::::::::::::::::::::::::::::::
XP_016 PQFIIGPGGVVNLT------------DETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SETPV-ATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
290 300 310 320 330 340
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
:::::::::::::::::::::::::::::::::::
XP_016 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
350 360 370 380
>>XP_011519728 (OMIM: 600610) PREDICTED: GA-binding prot (382 aa)
initn: 2172 init1: 1260 opt: 1322 Z-score: 820.1 bits: 160.5 E(85289): 6.1e-39
Smith-Waterman score: 2361; 96.7% identity (96.7% similar) in 395 aa overlap (1-395:1-382)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
:::::::::::::: ::::::::::::::::::::::::::::::::::
XP_011 PQFIIGPGGVVNLT------------DETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SETPV-ATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
290 300 310 320 330 340
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
:::::::::::::::::::::::::::::::::::
XP_011 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
350 360 370 380
>>NP_852092 (OMIM: 600610) GA-binding protein subunit be (348 aa)
initn: 2132 init1: 1260 opt: 1287 Z-score: 799.6 bits: 156.6 E(85289): 8.5e-38
Smith-Waterman score: 2078; 95.7% identity (95.7% similar) in 350 aa overlap (1-350:1-338)
10 20 30 40 50 60
pF1KB7 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
:::::::::::::: ::::::::::::::::::::::::::::::::::
NP_852 PQFIIGPGGVVNLT------------DETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
190 200 210 220
250 260 270 280 290 300
pF1KB7 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
::::::::::::::::::::::::::::::::::::::::::::: : :
NP_852 MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEVRSLLPGVLCRSHPK
290 300 310 320 330 340
370 380 390
pF1KB7 AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
395 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:50:44 2016 done: Sat Nov 5 19:50:45 2016
Total Scan time: 8.860 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]