Result of FASTA (omim) for
pF1KB7950
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7950, 394 aa
1>>>pF1KB7950 394 - 394 aa - 394 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.0317+/-0.000303; mu= 7.6531+/- 0.019
mean_var=212.5647+/-43.013, 0's: 0 Z-trim(124.5): 26 B-trim: 816 in 1/58
Lambda= 0.087969
statistics sampled from 46186 (46222) to 46186 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.832), E-opt: 0.2 (0.542), width: 16
Scan time: 10.780
The best scores are: opt bits E(85289)
NP_001028254 (OMIM: 164850) protein L-Myc isoform ( 394) 2775 364.1 3.3e-100
NP_001028253 (OMIM: 164850) protein L-Myc isoform ( 364) 2549 335.4 1.4e-91
NP_005367 (OMIM: 164850) protein L-Myc isoform 2 [ ( 236) 1460 197.0 4e-50
NP_001280157 (OMIM: 164280,164840,189960) N-myc pr ( 464) 465 71.0 6.7e-12
NP_005369 (OMIM: 164280,164840,189960) N-myc proto ( 464) 465 71.0 6.7e-12
XP_016859657 (OMIM: 164280,164840,189960) PREDICTE ( 464) 465 71.0 6.7e-12
NP_001280160 (OMIM: 164280,164840,189960) N-myc pr ( 253) 416 64.5 3.2e-10
NP_002458 (OMIM: 113970,190080) myc proto-oncogene ( 454) 294 49.3 2.2e-05
>>NP_001028254 (OMIM: 164850) protein L-Myc isoform 3 [H (394 aa)
initn: 2775 init1: 2775 opt: 2775 Z-score: 1919.9 bits: 364.1 E(85289): 3.3e-100
Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KB7 MCVCAGCRAAPSRRGAGPLQVAGGWSEGADMDYDSYQHYFYDYDCGEDFYRSTAPSEDIW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCVCAGCRAAPSRRGAGPLQVAGGWSEGADMDYDSYQHYFYDYDCGEDFYRSTAPSEDIW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KKFELVPSPPTSPPWGLGPGAGDPAPGIGPPEPWPGGCTGDEAESRGHSKGWGRNYASII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKFELVPSPPTSPPWGLGPGAGDPAPGIGPPEPWPGGCTGDEAESRGHSKGWGRNYASII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 RRDCMWSGFSARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRDCMWSGFSARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PKTQACSGSESPSDSENEEIDVVTVEKRQSLGIRKPVTITVRADPLDPCMKHFHISIHQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKTQACSGSESPSDSENEEIDVVTVEKRQSLGIRKPVTITVRADPLDPCMKHFHISIHQQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 QHNYAARFPPESCSQEEASERGPQEEVLERDAAGEKEDEEDEEIVSPPPVESEAAQSCHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHNYAARFPPESCSQEEASERGPQEEVLERDAAGEKEDEEDEEIVSPPPVESEAAQSCHP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYL
310 320 330 340 350 360
370 380 390
pF1KB7 QALVGAEKRMATEKRQLRCRQQQLQKRIAYLTGY
::::::::::::::::::::::::::::::::::
NP_001 QALVGAEKRMATEKRQLRCRQQQLQKRIAYLTGY
370 380 390
>>NP_001028253 (OMIM: 164850) protein L-Myc isoform 1 [H (364 aa)
initn: 2549 init1: 2549 opt: 2549 Z-score: 1765.4 bits: 335.4 E(85289): 1.4e-91
Smith-Waterman score: 2549; 100.0% identity (100.0% similar) in 364 aa overlap (31-394:1-364)
10 20 30 40 50 60
pF1KB7 MCVCAGCRAAPSRRGAGPLQVAGGWSEGADMDYDSYQHYFYDYDCGEDFYRSTAPSEDIW
::::::::::::::::::::::::::::::
NP_001 MDYDSYQHYFYDYDCGEDFYRSTAPSEDIW
10 20 30
70 80 90 100 110 120
pF1KB7 KKFELVPSPPTSPPWGLGPGAGDPAPGIGPPEPWPGGCTGDEAESRGHSKGWGRNYASII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKFELVPSPPTSPPWGLGPGAGDPAPGIGPPEPWPGGCTGDEAESRGHSKGWGRNYASII
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB7 RRDCMWSGFSARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRDCMWSGFSARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLGE
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB7 PKTQACSGSESPSDSENEEIDVVTVEKRQSLGIRKPVTITVRADPLDPCMKHFHISIHQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKTQACSGSESPSDSENEEIDVVTVEKRQSLGIRKPVTITVRADPLDPCMKHFHISIHQQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB7 QHNYAARFPPESCSQEEASERGPQEEVLERDAAGEKEDEEDEEIVSPPPVESEAAQSCHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHNYAARFPPESCSQEEASERGPQEEVLERDAAGEKEDEEDEEIVSPPPVESEAAQSCHP
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB7 KPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYL
280 290 300 310 320 330
370 380 390
pF1KB7 QALVGAEKRMATEKRQLRCRQQQLQKRIAYLTGY
::::::::::::::::::::::::::::::::::
NP_001 QALVGAEKRMATEKRQLRCRQQQLQKRIAYLTGY
340 350 360
>>NP_005367 (OMIM: 164850) protein L-Myc isoform 2 [Homo (236 aa)
initn: 1482 init1: 1460 opt: 1460 Z-score: 1020.8 bits: 197.0 E(85289): 4e-50
Smith-Waterman score: 1460; 100.0% identity (100.0% similar) in 195 aa overlap (1-195:1-195)
10 20 30 40 50 60
pF1KB7 MCVCAGCRAAPSRRGAGPLQVAGGWSEGADMDYDSYQHYFYDYDCGEDFYRSTAPSEDIW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MCVCAGCRAAPSRRGAGPLQVAGGWSEGADMDYDSYQHYFYDYDCGEDFYRSTAPSEDIW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KKFELVPSPPTSPPWGLGPGAGDPAPGIGPPEPWPGGCTGDEAESRGHSKGWGRNYASII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KKFELVPSPPTSPPWGLGPGAGDPAPGIGPPEPWPGGCTGDEAESRGHSKGWGRNYASII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 RRDCMWSGFSARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RRDCMWSGFSARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PKTQACSGSESPSDSENEEIDVVTVEKRQSLGIRKPVTITVRADPLDPCMKHFHISIHQQ
:::::::::::::::
NP_005 PKTQACSGSESPSDSGKDLPEPSKRGPPHGWPKLCPCLRSGIGSSQALGPSPPLFG
190 200 210 220 230
>>NP_001280157 (OMIM: 164280,164840,189960) N-myc proto- (464 aa)
initn: 695 init1: 314 opt: 465 Z-score: 334.6 bits: 71.0 E(85289): 6.7e-12
Smith-Waterman score: 595; 36.7% identity (53.1% similar) in 441 aa overlap (52-390:42-460)
30 40 50 60 70 80
pF1KB7 AGGWSEGADMDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGA
:: :.:::::::::.:.:: :: :.. .
NP_001 MICKNPDLEFDSLQPCFYPDEDDFYFGGPDSTPPGEDIWKKFELLPTPPLSPSRGFAEHS
20 30 40 50 60 70
90 100 110 120 130
pF1KB7 GDPAPGIGP----PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLER
..: . : : :. . ..: . : : : .: .:::::::::::.:::
NP_001 SEPPSWVTEMLLENELW-GSPAEEDAFGLGGLGGLTPN--PVILQDCMWSGFSAREKLER
80 90 100 110 120
140 150 160
pF1KB7 AVSDRL--------------APGA----P--RGNPPKASA--------------APDCT-
:::..: .::: : ::. :.: : .:.
NP_001 AVSEKLQHGRGPPTAGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAELAHPAAECVD
130 140 150 160 170 180
170 180
pF1KB7 PSL--------EAGNPAPAAPC-----------------PLGEP----------------
:.. . :.:::: : : :
NP_001 PAVVFPFPVNKREPAPVPAAPASAPAAGPAVASGAGIAAPAGAPGVAPPRPGGRQTSGGD
190 200 210 220 230 240
190 200 210 220
pF1KB7 -KTQACSGSESPSDS---------ENEEIDVVTVEKRQSLGIRKPVT---ITVRAD--PL
:. . :: .. ::: :.:::::::::::.: . : :: :::: :
NP_001 HKALSTSGEDTLSDSDDEDDEEEDEEEEIDVVTVEKRRSSSNTKAVTTFTITVRPKNAAL
250 260 270 280 290 300
230 240 250 260 270
pF1KB7 DPCMKHFH-------ISIHQQQHNYAARFPPESCSQEEASERGPQEEVLERDAAGEKEDE
: . . :::: ::::: : .:.: ::... .. :. . .
NP_001 GPGRAQSSELILKRCLPIHQQ-HNYAA--PSPYVESEDAP---PQKKI--KSEASPRPLK
310 320 330 340 350 360
280 290 300 310 320 330
pF1KB7 EDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVP
: :: :.: :. .::.:: .:.:::.:::.::::::: ::.:::.::
NP_001 S----VIPPK-----AKSLSPR--NSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVP
370 380 390 400
340 350 360 370 380 390
pF1KB7 TLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAYLTGY
:.. :: :::::.:: ::...: . :... ::..:. ::::: :.: .
NP_001 ELVKNEKAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLLKKIEHARTC
410 420 430 440 450 460
>>NP_005369 (OMIM: 164280,164840,189960) N-myc proto-onc (464 aa)
initn: 695 init1: 314 opt: 465 Z-score: 334.6 bits: 71.0 E(85289): 6.7e-12
Smith-Waterman score: 595; 36.7% identity (53.1% similar) in 441 aa overlap (52-390:42-460)
30 40 50 60 70 80
pF1KB7 AGGWSEGADMDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGA
:: :.:::::::::.:.:: :: :.. .
NP_005 MICKNPDLEFDSLQPCFYPDEDDFYFGGPDSTPPGEDIWKKFELLPTPPLSPSRGFAEHS
20 30 40 50 60 70
90 100 110 120 130
pF1KB7 GDPAPGIGP----PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLER
..: . : : :. . ..: . : : : .: .:::::::::::.:::
NP_005 SEPPSWVTEMLLENELW-GSPAEEDAFGLGGLGGLTPN--PVILQDCMWSGFSAREKLER
80 90 100 110 120
140 150 160
pF1KB7 AVSDRL--------------APGA----P--RGNPPKASA--------------APDCT-
:::..: .::: : ::. :.: : .:.
NP_005 AVSEKLQHGRGPPTAGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAELAHPAAECVD
130 140 150 160 170 180
170 180
pF1KB7 PSL--------EAGNPAPAAPC-----------------PLGEP----------------
:.. . :.:::: : : :
NP_005 PAVVFPFPVNKREPAPVPAAPASAPAAGPAVASGAGIAAPAGAPGVAPPRPGGRQTSGGD
190 200 210 220 230 240
190 200 210 220
pF1KB7 -KTQACSGSESPSDS---------ENEEIDVVTVEKRQSLGIRKPVT---ITVRAD--PL
:. . :: .. ::: :.:::::::::::.: . : :: :::: :
NP_005 HKALSTSGEDTLSDSDDEDDEEEDEEEEIDVVTVEKRRSSSNTKAVTTFTITVRPKNAAL
250 260 270 280 290 300
230 240 250 260 270
pF1KB7 DPCMKHFH-------ISIHQQQHNYAARFPPESCSQEEASERGPQEEVLERDAAGEKEDE
: . . :::: ::::: : .:.: ::... .. :. . .
NP_005 GPGRAQSSELILKRCLPIHQQ-HNYAA--PSPYVESEDAP---PQKKI--KSEASPRPLK
310 320 330 340 350 360
280 290 300 310 320 330
pF1KB7 EDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVP
: :: :.: :. .::.:: .:.:::.:::.::::::: ::.:::.::
NP_005 S----VIPPK-----AKSLSPR--NSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVP
370 380 390 400
340 350 360 370 380 390
pF1KB7 TLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAYLTGY
:.. :: :::::.:: ::...: . :... ::..:. ::::: :.: .
NP_005 ELVKNEKAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLLKKIEHARTC
410 420 430 440 450 460
>>XP_016859657 (OMIM: 164280,164840,189960) PREDICTED: N (464 aa)
initn: 695 init1: 314 opt: 465 Z-score: 334.6 bits: 71.0 E(85289): 6.7e-12
Smith-Waterman score: 595; 36.7% identity (53.1% similar) in 441 aa overlap (52-390:42-460)
30 40 50 60 70 80
pF1KB7 AGGWSEGADMDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGA
:: :.:::::::::.:.:: :: :.. .
XP_016 MICKNPDLEFDSLQPCFYPDEDDFYFGGPDSTPPGEDIWKKFELLPTPPLSPSRGFAEHS
20 30 40 50 60 70
90 100 110 120 130
pF1KB7 GDPAPGIGP----PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLER
..: . : : :. . ..: . : : : .: .:::::::::::.:::
XP_016 SEPPSWVTEMLLENELW-GSPAEEDAFGLGGLGGLTPN--PVILQDCMWSGFSAREKLER
80 90 100 110 120
140 150 160
pF1KB7 AVSDRL--------------APGA----P--RGNPPKASA--------------APDCT-
:::..: .::: : ::. :.: : .:.
XP_016 AVSEKLQHGRGPPTAGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAELAHPAAECVD
130 140 150 160 170 180
170 180
pF1KB7 PSL--------EAGNPAPAAPC-----------------PLGEP----------------
:.. . :.:::: : : :
XP_016 PAVVFPFPVNKREPAPVPAAPASAPAAGPAVASGAGIAAPAGAPGVAPPRPGGRQTSGGD
190 200 210 220 230 240
190 200 210 220
pF1KB7 -KTQACSGSESPSDS---------ENEEIDVVTVEKRQSLGIRKPVT---ITVRAD--PL
:. . :: .. ::: :.:::::::::::.: . : :: :::: :
XP_016 HKALSTSGEDTLSDSDDEDDEEEDEEEEIDVVTVEKRRSSSNTKAVTTFTITVRPKNAAL
250 260 270 280 290 300
230 240 250 260 270
pF1KB7 DPCMKHFH-------ISIHQQQHNYAARFPPESCSQEEASERGPQEEVLERDAAGEKEDE
: . . :::: ::::: : .:.: ::... .. :. . .
XP_016 GPGRAQSSELILKRCLPIHQQ-HNYAA--PSPYVESEDAP---PQKKI--KSEASPRPLK
310 320 330 340 350 360
280 290 300 310 320 330
pF1KB7 EDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVP
: :: :.: :. .::.:: .:.:::.:::.::::::: ::.:::.::
XP_016 S----VIPPK-----AKSLSPR--NSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVP
370 380 390 400
340 350 360 370 380 390
pF1KB7 TLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAYLTGY
:.. :: :::::.:: ::...: . :... ::..:. ::::: :.: .
XP_016 ELVKNEKAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLLKKIEHARTC
410 420 430 440 450 460
>>NP_001280160 (OMIM: 164280,164840,189960) N-myc proto- (253 aa)
initn: 451 init1: 314 opt: 416 Z-score: 304.4 bits: 64.5 E(85289): 3.2e-10
Smith-Waterman score: 431; 39.0% identity (57.2% similar) in 269 aa overlap (142-390:2-249)
120 130 140 150 160 170
pF1KB7 WGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPA
: ::: : . :.:
NP_001 MRGAPGNCVGAEQALARRKRAQTVAIRGHPR
10 20 30
180 190 200 210 220
pF1KB7 PAAPCPLGE--------PKTQACSGSESPSDSENEEIDVVTVEKRQSLGIRKPVT---IT
: : : :. : .: . .. ..:.:::::::::::.: . : :: ::
NP_001 P--PGPPGDTRAESPPDPLQSAGDDEDDEEEDEEEEIDVVTVEKRRSSSNTKAVTTFTIT
40 50 60 70 80
230 240 250 260 270
pF1KB7 VRAD--PLDPCMKHFH-------ISIHQQQHNYAARFPPESCSQEEASERGPQEEVLERD
:: : : . . :::: ::::: : .:.: ::... ..
NP_001 VRPKNAALGPGRAQSSELILKRCLPIHQQ-HNYAA--PSPYVESEDAP---PQKKI--KS
90 100 110 120 130 140
280 290 300 310 320 330
pF1KB7 AAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRF
:. . . : :: :.: :. .::.:: .:.:::.:::.::::::: :
NP_001 EASPRPLKS----VIPPK-----AKSLSPR--NSDSEDSERRRNHNILERQRRNDLRSSF
150 160 170 180 190
340 350 360 370 380 390
pF1KB7 LALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAYL
:.:::.:: :.. :: :::::.:: ::...: . :... ::..:. ::::: :.: .
NP_001 LTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLLKKIEHA
200 210 220 230 240 250
pF1KB7 TGY
NP_001 RTC
>>NP_002458 (OMIM: 113970,190080) myc proto-oncogene pro (454 aa)
initn: 624 init1: 286 opt: 294 Z-score: 217.5 bits: 49.3 E(85289): 2.2e-05
Smith-Waterman score: 550; 35.0% identity (52.3% similar) in 451 aa overlap (30-391:28-449)
10 20 30 40 50
pF1KB7 MCVCAGCRAAPSRRGAGPLQVAGGWSEGADMDYDSYQHYFYDYDCGEDFYRST-------
:.:::: : ::: : :.::..
NP_002 MDFFRVVENQQPPATMPLNVSFTNRNYDLDYDSVQPYFY-CDEEENFYQQQQQSELQP
10 20 30 40 50
60 70 80 90 100
pF1KB7 -APSEDIWKKFELVPSPPTSPPW--GL-GPG--AGDPAPGIGPPEPWPGG-CTGDEAESR
::::::::::::.:.:: :: :: .:. : : : . :. :.:. :
NP_002 PAPSEDIWKKFELLPTPPLSPSRRSGLCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMV
60 70 80 90 100 110
110 120 130 140
pF1KB7 GHSKGWGRNYAS-------------IIRRDCMWSGFSARERLERAVSDRLAP-GAPR---
. : : :: .::::::::: .: ::..:: : :
NP_002 TELLGGDMVNQSFICDPDDETFIKNIIIQDCMWSGFSAAAKL---VSEKLASYQAARKDS
120 130 140 150 160 170
150 160 170 180
pF1KB7 GNPPKASAAPDCTPS------LEAG-----NPAPAAPCPLGE---PKTQACSGS------
:.: : . :. : : :. .:. . : ::.. ::. : . :
NP_002 GSPNPARGHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPS
180 190 200 210 220 230
190 200 210
pF1KB7 -----------------------ESP----SDSENE-----EIDVVTVEKRQSLGIRK--
:.: ::::.: :::::.:::::. : :.
NP_002 SDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSES
240 250 260 270 280 290
220 230 240 250 260 270
pF1KB7 --PVTITVRADPLDP-CMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEV-LERD
: . : .: .:. :.: : :::::: :: . .. :..: . : . :.
NP_002 GSPSAGGHSKPPHSPLVLKRCHVSTH--QHNYAA--PPSTRKDYPAAKRVKLDSVRVLRQ
300 310 320 330 340 350
280 290 300 310 320 330
pF1KB7 AAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRF
..... : .: :::::. .::..:: :::.:::.:. :
NP_002 ISNNRK--------------------C-TSPRSSDTEENVKRRTHNVLERQRRNELKRSF
360 370 380
340 350 360 370 380 390
pF1KB7 LALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAYL
.:::::.: : . ::::::::.:: :. .. . :... .:. :: :..::.... :
NP_002 FALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL
390 400 410 420 430 440
pF1KB7 TGY
NP_002 RNSCA
450
394 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:43:47 2016 done: Sat Nov 5 14:43:48 2016
Total Scan time: 10.780 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]