Result of FASTA (omim) for
pF1KB7936
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7936, 216 aa
1>>>pF1KB7936 216 - 216 aa - 216 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3280+/-0.000429; mu= 14.6535+/- 0.027
mean_var=95.1766+/-18.025, 0's: 0 Z-trim(112.5): 170 B-trim: 33 in 1/51
Lambda= 0.131465
statistics sampled from 21327 (21510) to 21327 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.252), width: 16
Scan time: 4.580
The best scores are: opt bits E(85289)
NP_055407 (OMIM: 604660) Kv channel-interacting pr ( 216) 1444 284.0 1.3e-76
XP_016864896 (OMIM: 604660) PREDICTED: Kv channel- ( 225) 1327 261.8 6.3e-70
NP_001030010 (OMIM: 604660) Kv channel-interacting ( 225) 1327 261.8 6.3e-70
NP_001030009 (OMIM: 604660) Kv channel-interacting ( 227) 1319 260.3 1.8e-69
NP_001265269 (OMIM: 604660) Kv channel-interacting ( 188) 1266 250.2 1.7e-66
NP_671710 (OMIM: 608182) Kv channel-interacting pr ( 216) 1087 216.3 3.1e-56
XP_005248247 (OMIM: 608182) PREDICTED: Kv channel- ( 233) 1085 215.9 4.3e-56
NP_671712 (OMIM: 608182) Kv channel-interacting pr ( 229) 1080 215.0 8.1e-56
NP_001030175 (OMIM: 608182) Kv channel-interacting ( 225) 1079 214.8 9.1e-56
NP_079497 (OMIM: 608182) Kv channel-interacting pr ( 250) 1077 214.4 1.3e-55
NP_775286 (OMIM: 604661) Kv channel-interacting pr ( 225) 1042 207.8 1.2e-53
NP_775283 (OMIM: 604661) Kv channel-interacting pr ( 270) 1040 207.5 1.8e-53
XP_016871650 (OMIM: 604661) PREDICTED: Kv channel- ( 230) 1039 207.2 1.8e-53
NP_055406 (OMIM: 604661) Kv channel-interacting pr ( 285) 1040 207.5 1.8e-53
NP_775287 (OMIM: 604661) Kv channel-interacting pr ( 220) 1038 207.0 2e-53
NP_775284 (OMIM: 604661) Kv channel-interacting pr ( 252) 1038 207.1 2.2e-53
XP_016864142 (OMIM: 608182) PREDICTED: Kv channel- ( 188) 1036 206.6 2.3e-53
NP_001030176 (OMIM: 608182) Kv channel-interacting ( 188) 1036 206.6 2.3e-53
NP_671711 (OMIM: 608182) Kv channel-interacting pr ( 188) 1036 206.6 2.3e-53
NP_775285 (OMIM: 604661) Kv channel-interacting pr ( 227) 1014 202.5 4.7e-52
XP_011512188 (OMIM: 608182) PREDICTED: Kv channel- ( 223) 1010 201.7 7.9e-52
XP_011512185 (OMIM: 608182) PREDICTED: Kv channel- ( 240) 1008 201.3 1.1e-51
NP_001030086 (OMIM: 604662) calsenilin isoform 2 p ( 230) 1007 201.1 1.2e-51
XP_011512186 (OMIM: 608182) PREDICTED: Kv channel- ( 236) 1003 200.4 2.1e-51
XP_011512187 (OMIM: 608182) PREDICTED: Kv channel- ( 232) 1002 200.2 2.3e-51
NP_038462 (OMIM: 604662) calsenilin isoform 1 [Hom ( 256) 1002 200.2 2.5e-51
XP_011512184 (OMIM: 608182) PREDICTED: Kv channel- ( 257) 1000 199.9 3.3e-51
XP_011538033 (OMIM: 604661) PREDICTED: Kv channel- ( 230) 964 193.0 3.4e-49
XP_006717875 (OMIM: 604661) PREDICTED: Kv channel- ( 275) 962 192.7 5e-49
XP_005269787 (OMIM: 604661) PREDICTED: Kv channel- ( 225) 960 192.2 5.7e-49
XP_011512189 (OMIM: 608182) PREDICTED: Kv channel- ( 195) 959 192.0 5.9e-49
XP_011512191 (OMIM: 608182) PREDICTED: Kv channel- ( 195) 959 192.0 5.9e-49
XP_005269786 (OMIM: 604661) PREDICTED: Kv channel- ( 257) 960 192.3 6.3e-49
NP_001265268 (OMIM: 604660) Kv channel-interacting ( 241) 870 175.2 8.2e-44
NP_055101 (OMIM: 603315) neuronal calcium sensor 1 ( 190) 595 122.9 3.5e-28
XP_005270849 (OMIM: 142622,224500) PREDICTED: neur ( 193) 575 119.1 4.9e-27
XP_016856607 (OMIM: 142622,224500) PREDICTED: neur ( 193) 575 119.1 4.9e-27
NP_002134 (OMIM: 142622,224500) neuron-specific ca ( 193) 575 119.1 4.9e-27
NP_003376 (OMIM: 600817) visinin-like protein 1 [H ( 191) 567 117.6 1.4e-26
XP_011508649 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 565 117.2 1.8e-26
NP_001245286 (OMIM: 600207) hippocalcin-like prote ( 193) 565 117.2 1.8e-26
NP_002140 (OMIM: 600207) hippocalcin-like protein ( 193) 565 117.2 1.8e-26
XP_005246218 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 565 117.2 1.8e-26
XP_005246217 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 565 117.2 1.8e-26
XP_005246220 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 565 117.2 1.8e-26
XP_016859440 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 565 117.2 1.8e-26
NP_001245288 (OMIM: 600207) hippocalcin-like prote ( 193) 565 117.2 1.8e-26
XP_016859442 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 565 117.2 1.8e-26
XP_011508648 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 565 117.2 1.8e-26
XP_005246219 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 565 117.2 1.8e-26
>>NP_055407 (OMIM: 604660) Kv channel-interacting protei (216 aa)
initn: 1444 init1: 1444 opt: 1444 Z-score: 1496.5 bits: 284.0 E(85289): 1.3e-76
Smith-Waterman score: 1444; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB7 MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ
130 140 150 160 170 180
190 200 210
pF1KB7 KMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
::::::::::::::::::::::::::::::::::::
NP_055 KMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
190 200 210
>>XP_016864896 (OMIM: 604660) PREDICTED: Kv channel-inte (225 aa)
initn: 1327 init1: 1327 opt: 1327 Z-score: 1376.4 bits: 261.8 E(85289): 6.3e-70
Smith-Waterman score: 1327; 100.0% identity (100.0% similar) in 198 aa overlap (19-216:28-225)
10 20 30 40 50
pF1KB7 MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKR
:::::::::::::::::::::::::::::::::
XP_016 MSGCSKRCKLGFVKFAQTIFKLITGTLSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 ELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTP
130 140 150 160 170 180
180 190 200 210
pF1KB7 RQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
190 200 210 220
>>NP_001030010 (OMIM: 604660) Kv channel-interacting pro (225 aa)
initn: 1327 init1: 1327 opt: 1327 Z-score: 1376.4 bits: 261.8 E(85289): 6.3e-70
Smith-Waterman score: 1327; 100.0% identity (100.0% similar) in 198 aa overlap (19-216:28-225)
10 20 30 40 50
pF1KB7 MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKR
:::::::::::::::::::::::::::::::::
NP_001 MSGCSKRCKLGFVKFAQTIFKLITGTLSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 ELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTP
130 140 150 160 170 180
180 190 200 210
pF1KB7 RQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
190 200 210 220
>>NP_001030009 (OMIM: 604660) Kv channel-interacting pro (227 aa)
initn: 1319 init1: 1319 opt: 1319 Z-score: 1368.1 bits: 260.3 E(85289): 1.8e-69
Smith-Waterman score: 1412; 95.2% identity (95.2% similar) in 227 aa overlap (1-216:1-227)
10 20 30 40
pF1KB7 MGAVMGTFSSLQTKQRRPSKD-----------KIEDELEMTMVCHRPEGLEQLEAQTNFT
::::::::::::::::::::: ::::::::::::::::::::::::::::
NP_001 MGAVMGTFSSLQTKQRRPSKDIAWWYYQYQRDKIEDELEMTMVCHRPEGLEQLEAQTNFT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 KRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 DFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED
130 140 150 160 170 180
170 180 190 200 210
pF1KB7 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
190 200 210 220
>>NP_001265269 (OMIM: 604660) Kv channel-interacting pro (188 aa)
initn: 1266 init1: 1266 opt: 1266 Z-score: 1314.8 bits: 250.2 E(85289): 1.7e-66
Smith-Waterman score: 1266; 100.0% identity (100.0% similar) in 188 aa overlap (29-216:1-188)
10 20 30 40 50 60
pF1KB7 MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGF
::::::::::::::::::::::::::::::::
NP_001 MTMVCHRPEGLEQLEAQTNFTKRELQVLYRGF
10 20 30
70 80 90 100 110 120
pF1KB7 KNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB7 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ
100 110 120 130 140 150
190 200 210
pF1KB7 KMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
::::::::::::::::::::::::::::::::::::
NP_001 KMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
160 170 180
>>NP_671710 (OMIM: 608182) Kv channel-interacting protei (216 aa)
initn: 1102 init1: 1067 opt: 1087 Z-score: 1130.6 bits: 216.3 E(85289): 3.1e-56
Smith-Waterman score: 1087; 74.4% identity (93.7% similar) in 207 aa overlap (10-216:10-216)
10 20 30 40 50 60
pF1KB7 MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGF
: : .. . :..::::::. : ::::.:: ::::..:::.:::.:::::
NP_671 MNVRRVESISAQLEEASSTGDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR
:::::::::::.:::.::.::::.::..::::.::::::: ..:.:.::::. .::::::
NP_671 KNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ
:::.::: :.::::::::::::.::::.::.::::::::: ::::::::.:::::..:::
NP_671 GTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQ
130 140 150 160 170 180
190 200 210
pF1KB7 KMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
::::::::.::.:::.::::.:.:::::.:::.::.
NP_671 KMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENVI
190 200 210
>>XP_005248247 (OMIM: 608182) PREDICTED: Kv channel-inte (233 aa)
initn: 1102 init1: 1067 opt: 1085 Z-score: 1128.1 bits: 215.9 E(85289): 4.3e-56
Smith-Waterman score: 1085; 77.3% identity (96.5% similar) in 198 aa overlap (19-216:36-233)
10 20 30 40
pF1KB7 MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNF
:.:..::::::. : ::::.:: ::::..:
XP_005 WESEGLQTVGIVVIICASLKLLHLLGLIDFSEDSVEDELEMATVRHRPEALELLEAQSKF
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 TKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKF
::.:::.::::::::::::::::.:::.::.::::.::..::::.::::::: ..:.:.:
XP_005 TKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSF
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 EDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE
:::. .:::::::::.::: :.::::::::::::.::::.::.::::::::: :::::::
XP_005 EDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKE
130 140 150 160 170 180
170 180 190 200 210
pF1KB7 DTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
:.:::::..:::::::::::.::.:::.::::.:.:::::.:::.::.
XP_005 DAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENVI
190 200 210 220 230
>>NP_671712 (OMIM: 608182) Kv channel-interacting protei (229 aa)
initn: 1102 init1: 1067 opt: 1080 Z-score: 1123.1 bits: 215.0 E(85289): 8.1e-56
Smith-Waterman score: 1080; 77.2% identity (96.4% similar) in 197 aa overlap (20-216:33-229)
10 20 30 40
pF1KB7 MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFT
.:..::::::. : ::::.:: ::::..::
NP_671 LEGLEMIAVLIVIVLFVKLLEQFGLIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 KRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFE
:.:::.::::::::::::::::.:::.::.::::.::..::::.::::::: ..:.:.::
NP_671 KKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 DFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED
::. .:::::::::.::: :.::::::::::::.::::.::.::::::::: ::::::::
NP_671 DFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKED
130 140 150 160 170 180
170 180 190 200 210
pF1KB7 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
.:::::..:::::::::::.::.:::.::::.:.:::::.:::.::.
NP_671 APRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENVI
190 200 210 220
>>NP_001030175 (OMIM: 608182) Kv channel-interacting pro (225 aa)
initn: 1102 init1: 1067 opt: 1079 Z-score: 1122.1 bits: 214.8 E(85289): 9.1e-56
Smith-Waterman score: 1079; 77.6% identity (96.4% similar) in 196 aa overlap (21-216:30-225)
10 20 30 40 50
pF1KB7 MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKR
:..::::::. : ::::.:: ::::..:::.
NP_001 MSGCRKRCKREILKFAQYLLRLLTGSLHTDSVEDELEMATVRHRPEALELLEAQSKFTKK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 ELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF
:::.::::::::::::::::.:::.::.::::.::..::::.::::::: ..:.:.::::
NP_001 ELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTP
. .:::::::::.::: :.::::::::::::.::::.::.::::::::: ::::::::.:
NP_001 IKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAP
130 140 150 160 170 180
180 190 200 210
pF1KB7 RQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
::::..:::::::::::.::.:::.::::.:.:::::.:::.::.
NP_001 RQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENVI
190 200 210 220
>>NP_079497 (OMIM: 608182) Kv channel-interacting protei (250 aa)
initn: 1102 init1: 1067 opt: 1077 Z-score: 1119.5 bits: 214.4 E(85289): 1.3e-55
Smith-Waterman score: 1077; 75.0% identity (94.6% similar) in 204 aa overlap (14-216:47-250)
10 20 30 40
pF1KB7 MGAVMGTFSSLQTKQRRPS-KDKIEDELEMTMVCHRPEGLEQL
: :. ....::::::. : ::::.:: :
NP_079 SSTGGFLYAQNSTKRSIKERLMKLLPCSAAKTSSPAIQNSVEDELEMATVRHRPEALELL
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB7 EAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQ
:::..:::.:::.::::::::::::::::.:::.::.::::.::..::::.::::::: .
NP_079 EAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDH
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB7 TGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYT
.:.:.::::. .:::::::::.::: :.::::::::::::.::::.::.::::::::: :
NP_079 NGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCT
140 150 160 170 180 190
170 180 190 200 210
pF1KB7 YPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
:::::::.:::::..:::::::::::.::.:::.::::.:.:::::.:::.::.
NP_079 YPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENVI
200 210 220 230 240 250
216 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:12:49 2016 done: Sat Nov 5 10:12:50 2016
Total Scan time: 4.580 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]