Result of FASTA (omim) for
pF1KB7791
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7791, 459 aa
1>>>pF1KB7791 459 - 459 aa - 459 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7785+/-0.000373; mu= 14.0281+/- 0.023
mean_var=243.2118+/-48.832, 0's: 0 Z-trim(121.4): 1982 B-trim: 124 in 1/57
Lambda= 0.082240
statistics sampled from 35584 (37840) to 35584 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.444), width: 16
Scan time: 11.070
The best scores are: opt bits E(85289)
NP_004211 (OMIM: 608387) zinc finger protein 213 [ ( 459) 3256 399.4 1e-110
NP_001128127 (OMIM: 608387) zinc finger protein 21 ( 459) 3256 399.4 1e-110
XP_011520954 (OMIM: 608387) PREDICTED: zinc finger ( 285) 1687 212.9 8.8e-55
XP_005249152 (OMIM: 611643) PREDICTED: zinc finger ( 545) 971 128.4 4.7e-29
NP_061983 (OMIM: 611643) zinc finger protein with ( 545) 971 128.4 4.7e-29
NP_077819 (OMIM: 612791) zinc finger protein with ( 538) 960 127.1 1.2e-28
XP_006715278 (OMIM: 612791) PREDICTED: zinc finger ( 538) 960 127.1 1.2e-28
NP_001229823 (OMIM: 612791) zinc finger protein wi ( 538) 960 127.1 1.2e-28
NP_001308045 (OMIM: 165260) zinc finger and SCAN d ( 491) 955 126.4 1.7e-28
NP_862829 (OMIM: 165260) zinc finger and SCAN doma ( 491) 955 126.4 1.7e-28
XP_011525219 (OMIM: 165260) PREDICTED: zinc finger ( 491) 955 126.4 1.7e-28
XP_006723255 (OMIM: 165260) PREDICTED: zinc finger ( 491) 955 126.4 1.7e-28
XP_006720896 (OMIM: 604191) PREDICTED: zinc finger ( 598) 861 115.4 4.2e-25
XP_006718374 (OMIM: 605016) PREDICTED: zinc finger ( 517) 652 90.5 1.1e-17
NP_037382 (OMIM: 605016) zinc finger protein 215 [ ( 517) 652 90.5 1.1e-17
XP_011517301 (OMIM: 603132) PREDICTED: zinc finger ( 575) 652 90.6 1.2e-17
XP_006717343 (OMIM: 603132) PREDICTED: zinc finger ( 584) 652 90.6 1.2e-17
XP_011517300 (OMIM: 603132) PREDICTED: zinc finger ( 584) 652 90.6 1.2e-17
XP_016870610 (OMIM: 603132) PREDICTED: zinc finger ( 584) 652 90.6 1.2e-17
NP_932094 (OMIM: 603132) zinc finger protein 189 i ( 584) 652 90.6 1.2e-17
XP_006717344 (OMIM: 603132) PREDICTED: zinc finger ( 584) 652 90.6 1.2e-17
NP_001265161 (OMIM: 603132) zinc finger protein 18 ( 611) 652 90.6 1.2e-17
NP_001265160 (OMIM: 603132) zinc finger protein 18 ( 612) 652 90.6 1.2e-17
NP_003443 (OMIM: 603132) zinc finger protein 189 i ( 626) 652 90.7 1.3e-17
XP_016882854 (OMIM: 615580) PREDICTED: zinc finger ( 566) 650 90.4 1.4e-17
XP_011525696 (OMIM: 615580) PREDICTED: zinc finger ( 566) 650 90.4 1.4e-17
XP_005259380 (OMIM: 615580) PREDICTED: zinc finger ( 566) 650 90.4 1.4e-17
XP_016882852 (OMIM: 615580) PREDICTED: zinc finger ( 618) 650 90.4 1.5e-17
XP_016882851 (OMIM: 615580) PREDICTED: zinc finger ( 618) 650 90.4 1.5e-17
XP_016882853 (OMIM: 615580) PREDICTED: zinc finger ( 618) 650 90.4 1.5e-17
NP_115799 (OMIM: 615580) zinc finger protein 528 [ ( 628) 650 90.4 1.5e-17
XP_016882850 (OMIM: 615580) PREDICTED: zinc finger ( 702) 650 90.5 1.6e-17
XP_016882849 (OMIM: 615580) PREDICTED: zinc finger ( 702) 650 90.5 1.6e-17
XP_011525694 (OMIM: 615580) PREDICTED: zinc finger ( 712) 650 90.5 1.6e-17
XP_006723481 (OMIM: 615580) PREDICTED: zinc finger ( 712) 650 90.5 1.6e-17
XP_016882742 (OMIM: 606740) PREDICTED: zinc finger ( 349) 645 89.4 1.6e-17
NP_001275691 (OMIM: 606740) zinc finger protein 18 ( 349) 645 89.4 1.6e-17
XP_016882743 (OMIM: 606740) PREDICTED: zinc finger ( 349) 645 89.4 1.6e-17
XP_016882741 (OMIM: 606740) PREDICTED: zinc finger ( 349) 645 89.4 1.6e-17
XP_016882740 (OMIM: 606740) PREDICTED: zinc finger ( 349) 645 89.4 1.6e-17
NP_001275689 (OMIM: 606740) zinc finger protein 18 ( 349) 645 89.4 1.6e-17
XP_016882744 (OMIM: 606740) PREDICTED: zinc finger ( 349) 645 89.4 1.6e-17
XP_016882745 (OMIM: 606740) PREDICTED: zinc finger ( 349) 645 89.4 1.6e-17
XP_016882739 (OMIM: 606740) PREDICTED: zinc finger ( 349) 645 89.4 1.6e-17
NP_001275690 (OMIM: 606740) zinc finger protein 18 ( 349) 645 89.4 1.6e-17
XP_005272399 (OMIM: 601262) PREDICTED: zinc finger ( 542) 647 90.0 1.8e-17
XP_011515600 (OMIM: 601262) PREDICTED: zinc finger ( 682) 647 90.1 2e-17
NP_001025147 (OMIM: 601262) zinc finger protein 16 ( 682) 647 90.1 2e-17
XP_005272398 (OMIM: 601262) PREDICTED: zinc finger ( 682) 647 90.1 2e-17
NP_008889 (OMIM: 601262) zinc finger protein 16 [H ( 682) 647 90.1 2e-17
>>NP_004211 (OMIM: 608387) zinc finger protein 213 [Homo (459 aa)
initn: 3256 init1: 3256 opt: 3256 Z-score: 2108.5 bits: 399.4 E(85289): 1e-110
Smith-Waterman score: 3256; 100.0% identity (100.0% similar) in 459 aa overlap (1-459:1-459)
10 20 30 40 50 60
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 LKEGRPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRDLFWDIKRENSRNTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LKEGRPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRDLFWDIKRENSRNTTL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GFGLKGQSEKSLLQEMVPVVPGQTGSDVTVSWSPEEAEAWESENRPRAALGPVVGARRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GFGLKGQSEKSLLQEMVPVVPGQTGSDVTVSWSPEEAEAWESENRPRAALGPVVGARRGR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEKPHKCPECDKSFRSSSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEKPHKCPECDKSFRSSSDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 VRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGCSDCGKSFSLRSYLLDHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGCSDCGKSFSLRSYLLDHR
370 380 390 400 410 420
430 440 450
pF1KB7 RVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKMAQPVG
:::::::::::::::::::::::::::::::::::::::
NP_004 RVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKMAQPVG
430 440 450
>>NP_001128127 (OMIM: 608387) zinc finger protein 213 [H (459 aa)
initn: 3256 init1: 3256 opt: 3256 Z-score: 2108.5 bits: 399.4 E(85289): 1e-110
Smith-Waterman score: 3256; 100.0% identity (100.0% similar) in 459 aa overlap (1-459:1-459)
10 20 30 40 50 60
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 LKEGRPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRDLFWDIKRENSRNTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKEGRPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRDLFWDIKRENSRNTTL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GFGLKGQSEKSLLQEMVPVVPGQTGSDVTVSWSPEEAEAWESENRPRAALGPVVGARRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFGLKGQSEKSLLQEMVPVVPGQTGSDVTVSWSPEEAEAWESENRPRAALGPVVGARRGR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEKPHKCPECDKSFRSSSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEKPHKCPECDKSFRSSSDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 VRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGCSDCGKSFSLRSYLLDHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGCSDCGKSFSLRSYLLDHR
370 380 390 400 410 420
430 440 450
pF1KB7 RVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKMAQPVG
:::::::::::::::::::::::::::::::::::::::
NP_001 RVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKMAQPVG
430 440 450
>>XP_011520954 (OMIM: 608387) PREDICTED: zinc finger pro (285 aa)
initn: 1687 init1: 1687 opt: 1687 Z-score: 1104.5 bits: 212.9 E(85289): 8.8e-55
Smith-Waterman score: 1687; 99.2% identity (100.0% similar) in 242 aa overlap (1-242:1-242)
10 20 30 40 50 60
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 EAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 LKEGRPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRDLFWDIKRENSRNTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKEGRPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRDLFWDIKRENSRNTTL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GFGLKGQSEKSLLQEMVPVVPGQTGSDVTVSWSPEEAEAWESENRPRAALGPVVGARRGR
..
XP_011 ALAPEPRGTEEVASFPLQVLGSKAKVRSPCCRRWCRWCQARQAAT
250 260 270 280
>>XP_005249152 (OMIM: 611643) PREDICTED: zinc finger pro (545 aa)
initn: 1830 init1: 574 opt: 971 Z-score: 642.6 bits: 128.4 E(85289): 4.7e-29
Smith-Waterman score: 1070; 39.9% identity (63.1% similar) in 471 aa overlap (3-451:9-454)
10 20 30 40 50
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVED---SSWEQE-SAQHEDGRDSEACRQRFRQ
: :.::. . ::: :::: :. : : .: : :::::
XP_005 MAREPRKNAALDAQSAE--DQTGLLTVKVEKEEASALTAEVRAPCSPARGPERSRQRFRG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 FCYGDVHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHP
: : .. ::.::.:.: ::: .::.::...:::::::::::::::.:::..:.:::::::
XP_005 FRYPEAAGPREALSRLRELCGQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHP
60 70 80 90 100 110
120 130 140 150 160
pF1KB7 GSGEEAVALVEDLQKQ--------PVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARR
::::.:.:.: :..: :: :.. . . .:::.. : . .
XP_005 ESGEEVVVLLEYLERQLDEPAPQVPVGDQGQELLCCKMALLTQTQGSQSSQCQPMKALFK
120 130 140 150 160 170
170 180 190 200 210
pF1KB7 RPSV-PQEQHSHSAQPPALLKEG--RPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTL
. :. : :.. : :.: . : : . . .. : .: . . :. . .. : :
XP_005 HESLGSQPLHDRVLQVPGLAQGGCCREDAMVASRLTPGSQGLLKMEDVALTLT-PGWTQL
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB7 DPAQRDLFWDIKRENSRNTTLGFGLKGQSEKSLLQEMVPV--VPGQTGSDVT-----VSW
: .: .:. : :.:: ... ...: . :... ... :: .: . . . ..
XP_005 DSSQVNLYRDEKQEN-HSSLVSLGGEIQTKS---RDLPPVKKLPEKEHGKICHLREDIAQ
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB7 SPEEAEAWESENRPRAALGPVVGARRGRPPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDL
: .::: :.:.: . ..:.:: : : .::: : .: :
XP_005 IPTHAEAGEQEGRLQRKQKNAIGSRR------------------HYCHECGKSFAQSSGL
300 310 320 330
340 350 360 370 380 390
pF1KB7 ARHQRTHTGEKPHKCPECDKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADHQ
..:.: ::::::..: .: :.: .:: :: :: :::::::. : :::: ::.:. : ::
XP_005 TKHRRIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECEECGKVFSHSSNLIKHQ
340 350 360 370 380 390
400 410 420 430 440 450
pF1KB7 RIHTGEKPFGCSDCGKSFSLRSYLLDHRRVHTGERPFGCGECDKSFKQRAHLIAHQSLHA
: ::::::. :.::::.:: ::.:...::::.:. :. : :.:.. .::. :: .:
XP_005 RTHTGEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAFRRNSHLLRHQRIHG
400 410 420 430 440 450
pF1KB7 KMAQPVG
XP_005 DKNVQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRNRSLIEHQKIHTGEKPY
460 470 480 490 500 510
>>NP_061983 (OMIM: 611643) zinc finger protein with KRAB (545 aa)
initn: 1830 init1: 574 opt: 971 Z-score: 642.6 bits: 128.4 E(85289): 4.7e-29
Smith-Waterman score: 1070; 39.9% identity (63.1% similar) in 471 aa overlap (3-451:9-454)
10 20 30 40 50
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVED---SSWEQE-SAQHEDGRDSEACRQRFRQ
: :.::. . ::: :::: :. : : .: : :::::
NP_061 MAREPRKNAALDAQSAE--DQTGLLTVKVEKEEASALTAEVRAPCSPARGPERSRQRFRG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 FCYGDVHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHP
: : .. ::.::.:.: ::: .::.::...:::::::::::::::.:::..:.:::::::
NP_061 FRYPEAAGPREALSRLRELCGQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHP
60 70 80 90 100 110
120 130 140 150 160
pF1KB7 GSGEEAVALVEDLQKQ--------PVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARR
::::.:.:.: :..: :: :.. . . .:::.. : . .
NP_061 ESGEEVVVLLEYLERQLDEPAPQVPVGDQGQELLCCKMALLTQTQGSQSSQCQPMKALFK
120 130 140 150 160 170
170 180 190 200 210
pF1KB7 RPSV-PQEQHSHSAQPPALLKEG--RPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTL
. :. : :.. : :.: . : : . . .. : .: . . :. . .. : :
NP_061 HESLGSQPLHDRVLQVPGLAQGGCCREDAMVASRLTPGSQGLLKMEDVALTLT-PGWTQL
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB7 DPAQRDLFWDIKRENSRNTTLGFGLKGQSEKSLLQEMVPV--VPGQTGSDVT-----VSW
: .: .:. : :.:: ... ...: . :... ... :: .: . . . ..
NP_061 DSSQVNLYRDEKQEN-HSSLVSLGGEIQTKS---RDLPPVKKLPEKEHGKICHLREDIAQ
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB7 SPEEAEAWESENRPRAALGPVVGARRGRPPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDL
: .::: :.:.: . ..:.:: : : .::: : .: :
NP_061 IPTHAEAGEQEGRLQRKQKNAIGSRR------------------HYCHECGKSFAQSSGL
300 310 320 330
340 350 360 370 380 390
pF1KB7 ARHQRTHTGEKPHKCPECDKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADHQ
..:.: ::::::..: .: :.: .:: :: :: :::::::. : :::: ::.:. : ::
NP_061 TKHRRIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECEECGKVFSHSSNLIKHQ
340 350 360 370 380 390
400 410 420 430 440 450
pF1KB7 RIHTGEKPFGCSDCGKSFSLRSYLLDHRRVHTGERPFGCGECDKSFKQRAHLIAHQSLHA
: ::::::. :.::::.:: ::.:...::::.:. :. : :.:.. .::. :: .:
NP_061 RTHTGEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAFRRNSHLLRHQRIHG
400 410 420 430 440 450
pF1KB7 KMAQPVG
NP_061 DKNVQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRNRSLIEHQKIHTGEKPY
460 470 480 490 500 510
>>NP_077819 (OMIM: 612791) zinc finger protein with KRAB (538 aa)
initn: 2033 init1: 584 opt: 960 Z-score: 635.6 bits: 127.1 E(85289): 1.2e-28
Smith-Waterman score: 1011; 38.7% identity (65.3% similar) in 447 aa overlap (18-451:22-448)
10 20 30 40 50
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDV
::..:::. :. . ::. :.::: : : ..
NP_077 MARELSESTALDAQSTEDQMELLVIKVEE---EEAGFPSSPDLGSEGSRERFRGFRYPEA
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 HGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEA
::.::.:.: ::: .::.::...:::::::::::::::.:::..:.::::::: ::::.
NP_077 AGPREALSRLRELCRQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEV
60 70 80 90 100 110
120 130 140 150 160
pF1KB7 VALVEDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGAR--------RRPSV-P
:.:.: :..: . : .... . . : : . ... .. ::
NP_077 VVLLEYLERQLDEPAPQVSGVDQGQELLCCKMALLTPAPGSQSSQFQLMKALLKHESVGS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB7 QEQHSHSAQPPALLKEG--RPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRD
: ... : :.: . : : ... . .. .: . . :. . .. :: : .: .
NP_077 QPLQDRVLQVPVLAHGGCCREDKVVASRLTPESQGLLKVEDVALTLT-PEWTQQDSSQGN
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB7 LFWDIKRENSRNTTLGFGLKGQSEKSLLQEMVPV--VPGQTGSDVTVSWSPEEAEAWESE
: : :.:: ... ...: . :... ... :. .: . . .. . :.
NP_077 LCRDEKQEN-HGSLVSLGDEKQTKS---RDLPPAEELPEKEHGKISCHLREDIAQI----
240 250 260 270 280
290 300 310 320 330 340
pF1KB7 NRPRAALGPVVGARRGRPPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEK
: : . : ..:: .:.: .. .. . : : .::: : .: :..:.: :::::
NP_077 --PTCAEA---GEQEGR--LQRKQ-KNATGGRRHICHECGKSFAQSSGLSKHRRIHTGEK
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB7 PHKCPECDKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGC
:..: :: :.: .:: :: :: :::::::. : ::::.::.:. : ::: ::::::. :
NP_077 PYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKHQRTHTGEKPYEC
350 360 370 380 390 400
410 420 430 440 450
pF1KB7 SDCGKSFSLRSYLLDHRRVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKMAQPVG
.::::.:: ::.:.:.::::.:. :. : :.:.. .::. :: .:
NP_077 DDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRHQRIHTGDKNVQEPEQG
410 420 430 440 450 460
NP_077 EAWKSRMESQLENVETPMSYKCNECERSFTQNTGLIEHQKIHTGEKPYQCNACGKGFTRI
470 480 490 500 510 520
>>XP_006715278 (OMIM: 612791) PREDICTED: zinc finger pro (538 aa)
initn: 2033 init1: 584 opt: 960 Z-score: 635.6 bits: 127.1 E(85289): 1.2e-28
Smith-Waterman score: 1011; 38.7% identity (65.3% similar) in 447 aa overlap (18-451:22-448)
10 20 30 40 50
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDV
::..:::. :. . ::. :.::: : : ..
XP_006 MARELSESTALDAQSTEDQMELLVIKVEE---EEAGFPSSPDLGSEGSRERFRGFRYPEA
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 HGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEA
::.::.:.: ::: .::.::...:::::::::::::::.:::..:.::::::: ::::.
XP_006 AGPREALSRLRELCRQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEV
60 70 80 90 100 110
120 130 140 150 160
pF1KB7 VALVEDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGAR--------RRPSV-P
:.:.: :..: . : .... . . : : . ... .. ::
XP_006 VVLLEYLERQLDEPAPQVSGVDQGQELLCCKMALLTPAPGSQSSQFQLMKALLKHESVGS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB7 QEQHSHSAQPPALLKEG--RPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRD
: ... : :.: . : : ... . .. .: . . :. . .. :: : .: .
XP_006 QPLQDRVLQVPVLAHGGCCREDKVVASRLTPESQGLLKVEDVALTLT-PEWTQQDSSQGN
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB7 LFWDIKRENSRNTTLGFGLKGQSEKSLLQEMVPV--VPGQTGSDVTVSWSPEEAEAWESE
: : :.:: ... ...: . :... ... :. .: . . .. . :.
XP_006 LCRDEKQEN-HGSLVSLGDEKQTKS---RDLPPAEELPEKEHGKISCHLREDIAQI----
240 250 260 270 280
290 300 310 320 330 340
pF1KB7 NRPRAALGPVVGARRGRPPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEK
: : . : ..:: .:.: .. .. . : : .::: : .: :..:.: :::::
XP_006 --PTCAEA---GEQEGR--LQRKQ-KNATGGRRHICHECGKSFAQSSGLSKHRRIHTGEK
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB7 PHKCPECDKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGC
:..: :: :.: .:: :: :: :::::::. : ::::.::.:. : ::: ::::::. :
XP_006 PYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKHQRTHTGEKPYEC
350 360 370 380 390 400
410 420 430 440 450
pF1KB7 SDCGKSFSLRSYLLDHRRVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKMAQPVG
.::::.:: ::.:.:.::::.:. :. : :.:.. .::. :: .:
XP_006 DDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRHQRIHTGDKNVQEPEQG
410 420 430 440 450 460
XP_006 EAWKSRMESQLENVETPMSYKCNECERSFTQNTGLIEHQKIHTGEKPYQCNACGKGFTRI
470 480 490 500 510 520
>>NP_001229823 (OMIM: 612791) zinc finger protein with K (538 aa)
initn: 2033 init1: 584 opt: 960 Z-score: 635.6 bits: 127.1 E(85289): 1.2e-28
Smith-Waterman score: 1011; 38.7% identity (65.3% similar) in 447 aa overlap (18-451:22-448)
10 20 30 40 50
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDV
::..:::. :. . ::. :.::: : : ..
NP_001 MARELSESTALDAQSTEDQMELLVIKVEE---EEAGFPSSPDLGSEGSRERFRGFRYPEA
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 HGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEA
::.::.:.: ::: .::.::...:::::::::::::::.:::..:.::::::: ::::.
NP_001 AGPREALSRLRELCRQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEV
60 70 80 90 100 110
120 130 140 150 160
pF1KB7 VALVEDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGAR--------RRPSV-P
:.:.: :..: . : .... . . : : . ... .. ::
NP_001 VVLLEYLERQLDEPAPQVSGVDQGQELLCCKMALLTPAPGSQSSQFQLMKALLKHESVGS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB7 QEQHSHSAQPPALLKEG--RPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRD
: ... : :.: . : : ... . .. .: . . :. . .. :: : .: .
NP_001 QPLQDRVLQVPVLAHGGCCREDKVVASRLTPESQGLLKVEDVALTLT-PEWTQQDSSQGN
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB7 LFWDIKRENSRNTTLGFGLKGQSEKSLLQEMVPV--VPGQTGSDVTVSWSPEEAEAWESE
: : :.:: ... ...: . :... ... :. .: . . .. . :.
NP_001 LCRDEKQEN-HGSLVSLGDEKQTKS---RDLPPAEELPEKEHGKISCHLREDIAQI----
240 250 260 270 280
290 300 310 320 330 340
pF1KB7 NRPRAALGPVVGARRGRPPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEK
: : . : ..:: .:.: .. .. . : : .::: : .: :..:.: :::::
NP_001 --PTCAEA---GEQEGR--LQRKQ-KNATGGRRHICHECGKSFAQSSGLSKHRRIHTGEK
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB7 PHKCPECDKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGC
:..: :: :.: .:: :: :: :::::::. : ::::.::.:. : ::: ::::::. :
NP_001 PYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKHQRTHTGEKPYEC
350 360 370 380 390 400
410 420 430 440 450
pF1KB7 SDCGKSFSLRSYLLDHRRVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKMAQPVG
.::::.:: ::.:.:.::::.:. :. : :.:.. .::. :: .:
NP_001 DDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRHQRIHTGDKNVQEPEQG
410 420 430 440 450 460
NP_001 EAWKSRMESQLENVETPMSYKCNECERSFTQNTGLIEHQKIHTGEKPYQCNACGKGFTRI
470 480 490 500 510 520
>>NP_001308045 (OMIM: 165260) zinc finger and SCAN domai (491 aa)
initn: 3245 init1: 592 opt: 955 Z-score: 632.8 bits: 126.4 E(85289): 1.7e-28
Smith-Waterman score: 985; 38.6% identity (61.8% similar) in 477 aa overlap (1-451:1-458)
10 20 30 40 50
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRD----SEACRQRFRQFCYGDV
:: : .. . .: : ...: ::::. . : :...: ::: : :::.: : ..
NP_001 MAIPKHSLSPVPWEEDSFLQVKVEEEEEASLSQGGESSHDHIAHSEAARLRFRHFRYEEA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 HGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEA
:::::...: :::.::.:: ..:::::::::::::: .:: :::.:: : : :::::
NP_001 SGPHEALAHLRALCCQWLQPEAHSKEQILELLVLEQFLGALPPEIQAWVGAQSPKSGEEA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VALVEDL-QKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSA
..::::: : ..: : :. ::: ..:. .: . .: . . .
NP_001 AVLVEDLTQVLDKRGW--D-PG--AEP------TEASCKQSDLGESEPSNVTETLMGGVS
130 140 150 160
180 190 200 210 220 230
pF1KB7 QPPALLKEGRPGETTDTCFVSGVHGPVALGDIP--FYFSREEWGTLDPAQRDLFWDIK-R
::..: .: ... ::. : . .. ..:.. : : .:. : . :
NP_001 LGPAFVKACEPEGSSER---SGLSGEIWTKSVTQQIHFKK----TSGP-YKDVPTDQRGR
170 180 190 200 210 220
240 250 260 270
pF1KB7 EN--SRNTTLGFGLKGQSEKSLLQEMVPVV------PGQTGSDVTVSWSPE------EAE
:. :::.. .. ..:: .. .: : : : : : :
NP_001 ESGASRNSSSAWPNLTSQEKPPSEDKFDLVDAYGTEPPYTYSGKRSSKCRECRKMFQSAS
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB7 AWESENRPRAALGPVVGARRGRPPTRRRQFRDL----AAEKPHSCGQCGKRFRWGSDLAR
: :.... .. : . .. :. .: .. . .. ::: : .::: : . :..
NP_001 ALEAHQKTHSRKTPYACSECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQ
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB7 HQRTHTGEKPHKCPECDKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRI
::: ::::::.:: :: :.: :. :..:: :::::.:. :. :::.::.:..:..::::
NP_001 HQRIHTGEKPYKCGECGKTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRI
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB7 HTGEKPFGCSDCGKSFSLRSYLLDHRRVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKM
::::::. :. ::..:: : :. : :.:.::.:. : : :.: : . :: :: .:
NP_001 HTGEKPYKCDACGRAFSDCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGE
410 420 430 440 450 460
pF1KB7 AQPVG
NP_001 KPYKCSDCGKAFSRSSALMVHLRIHITVLQ
470 480 490
>>NP_862829 (OMIM: 165260) zinc finger and SCAN domain-c (491 aa)
initn: 3245 init1: 592 opt: 955 Z-score: 632.8 bits: 126.4 E(85289): 1.7e-28
Smith-Waterman score: 985; 38.6% identity (61.8% similar) in 477 aa overlap (1-451:1-458)
10 20 30 40 50
pF1KB7 MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRD----SEACRQRFRQFCYGDV
:: : .. . .: : ...: ::::. . : :...: ::: : :::.: : ..
NP_862 MAIPKHSLSPVPWEEDSFLQVKVEEEEEASLSQGGESSHDHIAHSEAARLRFRHFRYEEA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 HGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEA
:::::...: :::.::.:: ..:::::::::::::: .:: :::.:: : : :::::
NP_862 SGPHEALAHLRALCCQWLQPEAHSKEQILELLVLEQFLGALPPEIQAWVGAQSPKSGEEA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VALVEDL-QKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSA
..::::: : ..: : :. ::: ..:. .: . .: . . .
NP_862 AVLVEDLTQVLDKRGW--D-PG--AEP------TEASCKQSDLGESEPSNVTETLMGGVS
130 140 150 160
180 190 200 210 220 230
pF1KB7 QPPALLKEGRPGETTDTCFVSGVHGPVALGDIP--FYFSREEWGTLDPAQRDLFWDIK-R
::..: .: ... ::. : . .. ..:.. : : .:. : . :
NP_862 LGPAFVKACEPEGSSER---SGLSGEIWTKSVTQQIHFKK----TSGP-YKDVPTDQRGR
170 180 190 200 210 220
240 250 260 270
pF1KB7 EN--SRNTTLGFGLKGQSEKSLLQEMVPVV------PGQTGSDVTVSWSPE------EAE
:. :::.. .. ..:: .. .: : : : : : :
NP_862 ESGASRNSSSAWPNLTSQEKPPSEDKFDLVDAYGTEPPYTYSGKRSSKCRECRKMFQSAS
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB7 AWESENRPRAALGPVVGARRGRPPTRRRQFRDL----AAEKPHSCGQCGKRFRWGSDLAR
: :.... .. : . .. :. .: .. . .. ::: : .::: : . :..
NP_862 ALEAHQKTHSRKTPYACSECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQ
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB7 HQRTHTGEKPHKCPECDKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRI
::: ::::::.:: :: :.: :. :..:: :::::.:. :. :::.::.:..:..::::
NP_862 HQRIHTGEKPYKCGECGKTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRI
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB7 HTGEKPFGCSDCGKSFSLRSYLLDHRRVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKM
::::::. :. ::..:: : :. : :.:.::.:. : : :.: : . :: :: .:
NP_862 HTGEKPYKCDACGRAFSDCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGE
410 420 430 440 450 460
pF1KB7 AQPVG
NP_862 KPYKCSDCGKAFSRSSALMVHLRIHITVLQ
470 480 490
459 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:19:50 2016 done: Fri Nov 4 22:19:51 2016
Total Scan time: 11.070 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]