Result of FASTA (omim) for
pF1KB7744
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7744, 487 aa
1>>>pF1KB7744 487 - 487 aa - 487 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.7807+/-0.000379; mu= -3.9733+/- 0.024
mean_var=551.7663+/-130.350, 0's: 0 Z-trim(125.2): 560 B-trim: 2515 in 1/57
Lambda= 0.054601
statistics sampled from 47152 (48454) to 47152 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.835), E-opt: 0.2 (0.568), width: 16
Scan time: 9.890
The best scores are: opt bits E(85289)
XP_016882078 (OMIM: 605859) PREDICTED: zinc finger ( 487) 3450 286.3 1.3e-76
NP_055198 (OMIM: 605859) zinc finger and BTB domai ( 487) 3450 286.3 1.3e-76
XP_011525020 (OMIM: 605859) PREDICTED: zinc finger ( 487) 3450 286.3 1.3e-76
XP_016882077 (OMIM: 605859) PREDICTED: zinc finger ( 523) 2218 189.3 2.2e-47
XP_016882079 (OMIM: 605859) PREDICTED: zinc finger ( 311) 2054 176.1 1.3e-43
NP_001303831 (OMIM: 605859) zinc finger and BTB do ( 210) 1524 134.1 3.7e-31
XP_016882080 (OMIM: 605859) PREDICTED: zinc finger ( 246) 1254 112.9 1e-24
XP_016882081 (OMIM: 605859) PREDICTED: zinc finger ( 191) 1244 112.0 1.5e-24
NP_001303832 (OMIM: 605859) zinc finger and BTB do ( 155) 1145 104.1 3e-22
NP_005997 (OMIM: 176797,612447) zinc finger and BT ( 673) 531 56.6 2.6e-07
XP_016873746 (OMIM: 176797,612447) PREDICTED: zinc ( 673) 531 56.6 2.6e-07
NP_001018011 (OMIM: 176797,612447) zinc finger and ( 673) 531 56.6 2.6e-07
XP_016873748 (OMIM: 176797,612447) PREDICTED: zinc ( 673) 531 56.6 2.6e-07
XP_016873747 (OMIM: 176797,612447) PREDICTED: zinc ( 673) 531 56.6 2.6e-07
NP_862827 (OMIM: 608992) B-cell CLL/lymphoma 6 mem ( 480) 355 42.5 0.0032
>>XP_016882078 (OMIM: 605859) PREDICTED: zinc finger and (487 aa)
initn: 3450 init1: 3450 opt: 3450 Z-score: 1496.4 bits: 286.3 E(85289): 1.3e-76
Smith-Waterman score: 3450; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
430 440 450 460 470 480
pF1KB7 CPSSSTT
:::::::
XP_016 CPSSSTT
>>NP_055198 (OMIM: 605859) zinc finger and BTB domain-co (487 aa)
initn: 3450 init1: 3450 opt: 3450 Z-score: 1496.4 bits: 286.3 E(85289): 1.3e-76
Smith-Waterman score: 3450; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
430 440 450 460 470 480
pF1KB7 CPSSSTT
:::::::
NP_055 CPSSSTT
>>XP_011525020 (OMIM: 605859) PREDICTED: zinc finger and (487 aa)
initn: 3450 init1: 3450 opt: 3450 Z-score: 1496.4 bits: 286.3 E(85289): 1.3e-76
Smith-Waterman score: 3450; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
430 440 450 460 470 480
pF1KB7 CPSSSTT
:::::::
XP_011 CPSSSTT
>>XP_016882077 (OMIM: 605859) PREDICTED: zinc finger and (523 aa)
initn: 2256 init1: 2214 opt: 2218 Z-score: 971.6 bits: 189.3 E(85289): 2.2e-47
Smith-Waterman score: 3348; 93.1% identity (93.1% similar) in 519 aa overlap (1-483:1-519)
10 20 30 40 50 60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
250 260 270 280 290 300
310 320
pF1KB7 APKGLWSQNQLASSSPTPG------------------------------------SLPQG
::::::::::::::::::: :::::
XP_016 APKGLWSQNQLASSSPTPGKPLAVLHTPVTWCLLWAGARGVQPEQGPYLPLFLPGSLPQG
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB7 PAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSL
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB7 KHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQ
430 440 450 460 470 480
450 460 470 480
pF1KB7 AHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
:::::::::::::::::::::::::::::::::::::::
XP_016 AHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
490 500 510 520
>>XP_016882079 (OMIM: 605859) PREDICTED: zinc finger and (311 aa)
initn: 2105 init1: 2054 opt: 2054 Z-score: 904.2 bits: 176.1 E(85289): 1.3e-43
Smith-Waterman score: 2054; 99.7% identity (100.0% similar) in 296 aa overlap (1-296:1-296)
10 20 30 40 50 60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_016 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRFPPPGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
XP_016 RTAQPWGDGRV
310
>>NP_001303831 (OMIM: 605859) zinc finger and BTB domain (210 aa)
initn: 1524 init1: 1524 opt: 1524 Z-score: 680.4 bits: 134.1 E(85289): 3.7e-31
Smith-Waterman score: 1524; 100.0% identity (100.0% similar) in 209 aa overlap (279-487:2-210)
250 260 270 280 290 300
pF1KB7 WAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLNAPKGLWSQ
::::::::::::::::::::::::::::::
NP_001 MSTPTTGAWQEVWREQRIPLSLNAPKGLWSQ
10 20 30
310 320 330 340 350 360
pF1KB7 NQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPA
40 50 60 70 80 90
370 380 390 400 410 420
pF1KB7 RSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPY
100 110 120 130 140 150
430 440 450 460 470 480
pF1KB7 RCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
160 170 180 190 200 210
>>XP_016882080 (OMIM: 605859) PREDICTED: zinc finger and (246 aa)
initn: 1254 init1: 1254 opt: 1254 Z-score: 564.7 bits: 112.9 E(85289): 1e-24
Smith-Waterman score: 1442; 85.3% identity (85.3% similar) in 245 aa overlap (279-487:2-246)
250 260 270 280 290 300
pF1KB7 WAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLNAPKGLWSQ
::::::::::::::::::::::::::::::
XP_016 MSTPTTGAWQEVWREQRIPLSLNAPKGLWSQ
10 20 30
310 320 330
pF1KB7 NQLASSSPTPG------------------------------------SLPQGPAQLSPGE
::::::::::: :::::::::::::
XP_016 NQLASSSPTPGKPLAVLHTPVTWCLLWAGARGVQPEQGPYLPLFLPGSLPQGPAQLSPGE
40 50 60 70 80 90
340 350 360 370 380 390
pF1KB7 MEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHY
100 110 120 130 140 150
400 410 420 430 440 450
pF1KB7 RVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQAHMRGHSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQAHMRGHSP
160 170 180 190 200 210
460 470 480
pF1KB7 SQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
:::::::::::::::::::::::::::::::::::
XP_016 SQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
220 230 240
>>XP_016882081 (OMIM: 605859) PREDICTED: zinc finger and (191 aa)
initn: 1244 init1: 1244 opt: 1244 Z-score: 561.6 bits: 112.0 E(85289): 1.5e-24
Smith-Waterman score: 1244; 100.0% identity (100.0% similar) in 169 aa overlap (319-487:23-191)
290 300 310 320 330 340
pF1KB7 VWREQRIPLSLNAPKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCA
::::::::::::::::::::::::::::::
XP_016 MAFPSTIAPPPLEPGRRSGGNRGSLPQGPAQLSPGEMEESDQGHTGALATCA
10 20 30 40 50
350 360 370 380 390 400
pF1KB7 GHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQ
60 70 80 90 100 110
410 420 430 440 450 460
pF1KB7 RSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYS
120 130 140 150 160 170
470 480
pF1KB7 SSRPSRPSTSPCCPSSSTT
:::::::::::::::::::
XP_016 SSRPSRPSTSPCCPSSSTT
180 190
>>NP_001303832 (OMIM: 605859) zinc finger and BTB domain (155 aa)
initn: 1145 init1: 1145 opt: 1145 Z-score: 520.4 bits: 104.1 E(85289): 3e-22
Smith-Waterman score: 1145; 100.0% identity (100.0% similar) in 155 aa overlap (333-487:1-155)
310 320 330 340 350 360
pF1KB7 KGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHP
::::::::::::::::::::::::::::::
NP_001 MEESDQGHTGALATCAGHEDKAGCPPRPHP
10 20 30
370 380 390 400 410 420
pF1KB7 PPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRT
40 50 60 70 80 90
430 440 450 460 470 480
pF1KB7 HGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCP
100 110 120 130 140 150
pF1KB7 SSSTT
:::::
NP_001 SSSTT
>>NP_005997 (OMIM: 176797,612447) zinc finger and BTB do (673 aa)
initn: 716 init1: 325 opt: 531 Z-score: 252.3 bits: 56.6 E(85289): 2.6e-07
Smith-Waterman score: 531; 68.4% identity (86.7% similar) in 98 aa overlap (371-467:572-669)
350 360 370 380 390 400
pF1KB7 TGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKP
.:: :. :::.::::::.::::::::::::
NP_005 GDHPYECEFCGSCFRDESTLKSHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKP
550 560 570 580 590 600
410 420 430 440 450
pF1KB7 FSCSLCPQRSRDFSAMTKHLRTH-GAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGW
: :.:: :::::.::: :::::: ::.::.:..: ::::.::: ::.::.: ..:: :
NP_005 FECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICTEYCPSLSSMQKHMKGHKPEEIPPDW
610 620 630 640 650 660
460 470 480
pF1KB7 TIRSTFLYSSSRPSRPSTSPCCPSSSTT
:..:.::
NP_005 RIEKTYLYLCYV
670
487 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:21:06 2016 done: Fri Nov 4 09:21:07 2016
Total Scan time: 9.890 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]