Result of FASTA (omim) for
pF1KB7629
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7629, 319 aa
1>>>pF1KB7629 319 - 319 aa - 319 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1488+/-0.000522; mu= 2.4194+/- 0.032
mean_var=237.3608+/-51.445, 0's: 0 Z-trim(114.5): 724 B-trim: 0 in 0/58
Lambda= 0.083247
statistics sampled from 23446 (24314) to 23446 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.285), width: 16
Scan time: 7.930
The best scores are: opt bits E(85289)
NP_055206 (OMIM: 609599) ankyrin repeat domain-con ( 319) 2070 262.0 1.2e-69
NP_065082 (OMIM: 610734) ankyrin repeat domain-con ( 360) 846 115.0 2.3e-25
NP_001278147 (OMIM: 610734) ankyrin repeat domain- ( 446) 846 115.1 2.7e-25
NP_659431 (OMIM: 610736) ankyrin repeat domain-con ( 305) 773 106.2 9.1e-23
NP_001123453 (OMIM: 610734) ankyrin repeat domain- ( 327) 571 81.9 1.9e-15
NP_001278148 (OMIM: 610734) ankyrin repeat domain- ( 413) 571 82.0 2.3e-15
XP_016865986 (OMIM: 610583) PREDICTED: ankyrin rep ( 689) 340 54.5 7.2e-07
XP_016865984 (OMIM: 610583) PREDICTED: ankyrin rep ( 694) 340 54.5 7.2e-07
XP_016865993 (OMIM: 610583) PREDICTED: ankyrin rep ( 659) 338 54.3 8.2e-07
XP_016865995 (OMIM: 610583) PREDICTED: ankyrin rep ( 656) 325 52.7 2.4e-06
XP_016865990 (OMIM: 610583) PREDICTED: ankyrin rep ( 661) 325 52.7 2.4e-06
XP_016865998 (OMIM: 610583) PREDICTED: ankyrin rep ( 626) 323 52.5 2.8e-06
XP_016861517 (OMIM: 611122) PREDICTED: serine/thre ( 687) 323 52.5 2.9e-06
XP_011533901 (OMIM: 610583) PREDICTED: ankyrin rep ( 694) 323 52.5 3e-06
XP_011517332 (OMIM: 607001,610253) PREDICTED: hist ( 559) 320 52.0 3.3e-06
XP_016865994 (OMIM: 610583) PREDICTED: ankyrin rep ( 659) 321 52.2 3.4e-06
XP_011531848 (OMIM: 611122) PREDICTED: serine/thre ( 997) 323 52.7 3.8e-06
XP_011531847 (OMIM: 611122) PREDICTED: serine/thre ( 997) 323 52.7 3.8e-06
XP_011531849 (OMIM: 611122) PREDICTED: serine/thre ( 997) 323 52.7 3.8e-06
XP_011531844 (OMIM: 611122) PREDICTED: serine/thre (1025) 323 52.7 3.9e-06
XP_011531843 (OMIM: 611122) PREDICTED: serine/thre (1027) 323 52.7 3.9e-06
NP_056014 (OMIM: 611122) serine/threonine-protein (1053) 323 52.7 3.9e-06
XP_005265053 (OMIM: 611122) PREDICTED: serine/thre (1083) 323 52.7 4e-06
XP_011531842 (OMIM: 611122) PREDICTED: serine/thre (1086) 323 52.7 4e-06
XP_011517333 (OMIM: 607001,610253) PREDICTED: hist ( 488) 316 51.5 4.2e-06
XP_011517331 (OMIM: 607001,610253) PREDICTED: hist ( 775) 319 52.1 4.5e-06
NP_002805 (OMIM: 300880) 26S proteasome non-ATPase ( 226) 308 50.2 4.8e-06
XP_016865996 (OMIM: 610583) PREDICTED: ankyrin rep ( 656) 314 51.4 6e-06
XP_011517335 (OMIM: 607001,610253) PREDICTED: hist (1246) 319 52.3 6.2e-06
XP_011517328 (OMIM: 607001,610253) PREDICTED: hist (1253) 319 52.3 6.2e-06
XP_016870627 (OMIM: 607001,610253) PREDICTED: hist (1260) 319 52.3 6.2e-06
XP_016870626 (OMIM: 607001,610253) PREDICTED: hist (1260) 319 52.3 6.2e-06
XP_016870625 (OMIM: 607001,610253) PREDICTED: hist (1265) 319 52.3 6.2e-06
XP_005266167 (OMIM: 607001,610253) PREDICTED: hist (1267) 319 52.3 6.2e-06
XP_011517327 (OMIM: 607001,610253) PREDICTED: hist (1267) 319 52.3 6.2e-06
XP_011517326 (OMIM: 607001,610253) PREDICTED: hist (1275) 319 52.3 6.3e-06
XP_016870624 (OMIM: 607001,610253) PREDICTED: hist (1291) 319 52.3 6.3e-06
XP_006717351 (OMIM: 607001,610253) PREDICTED: hist (1292) 319 52.3 6.3e-06
XP_016870623 (OMIM: 607001,610253) PREDICTED: hist (1293) 319 52.3 6.3e-06
XP_011517325 (OMIM: 607001,610253) PREDICTED: hist (1294) 319 52.3 6.3e-06
XP_005266162 (OMIM: 607001,610253) PREDICTED: hist (1295) 319 52.3 6.3e-06
NP_079033 (OMIM: 607001,610253) histone-lysine N-m (1298) 319 52.3 6.3e-06
XP_011517324 (OMIM: 607001,610253) PREDICTED: hist (1300) 319 52.3 6.3e-06
XP_011517323 (OMIM: 607001,610253) PREDICTED: hist (1301) 319 52.3 6.3e-06
NP_065210 (OMIM: 182900,612641) ankyrin-1 isoform (1719) 315 52.0 1.1e-05
XP_011542807 (OMIM: 182900,612641) PREDICTED: anky (1751) 315 52.0 1.1e-05
XP_011542806 (OMIM: 182900,612641) PREDICTED: anky (1752) 315 52.0 1.1e-05
XP_016868818 (OMIM: 182900,612641) PREDICTED: anky (1759) 315 52.0 1.1e-05
XP_011542805 (OMIM: 182900,612641) PREDICTED: anky (1791) 315 52.0 1.1e-05
XP_016868817 (OMIM: 182900,612641) PREDICTED: anky (1792) 315 52.0 1.1e-05
>>NP_055206 (OMIM: 609599) ankyrin repeat domain-contain (319 aa)
initn: 2070 init1: 2070 opt: 2070 Z-score: 1371.3 bits: 262.0 E(85289): 1.2e-69
Smith-Waterman score: 2070; 100.0% identity (100.0% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KB7 MMVLKVEELVTGKKNGNGEAGEFLPEDFRDGEYEAAVTLEKQEDLKTLLAHPVTLGEQQW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MMVLKVEELVTGKKNGNGEAGEFLPEDFRDGEYEAAVTLEKQEDLKTLLAHPVTLGEQQW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KSEKQREAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYRKTKVPVVKEPEPEIITEPVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KSEKQREAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYRKTKVPVVKEPEPEIITEPVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VPTFLKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VPTFLKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 CEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLNIKNCAGKTPMDLVLHWQNGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 CEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLNIKNCAGKTPMDLVLHWQNGTK
250 260 270 280 290 300
310
pF1KB7 AIFDSLRENSYKTSRIATF
:::::::::::::::::::
NP_055 AIFDSLRENSYKTSRIATF
310
>>NP_065082 (OMIM: 610734) ankyrin repeat domain-contain (360 aa)
initn: 1119 init1: 800 opt: 846 Z-score: 576.2 bits: 115.0 E(85289): 2.3e-25
Smith-Waterman score: 846; 48.4% identity (75.1% similar) in 285 aa overlap (20-300:50-328)
10 20 30 40
pF1KB7 MMVLKVEELVTGKKNGNGEAGEFLPEDFR-DGEYEAAVTLEKQEDLKTL
: : : .: :.. . . : :: :
NP_065 ALWPAEAVMDGTMEDSEAVQRATALIEQRLAQEEENEKLRGDARQKLPMDLLVLEDEKHH
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB7 LAHPVTLGEQQWKSEKQREAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYRKTKVPVVK
:. ..: :. :.... ..: .:. : .. .. .. .:.:.:..: .: . ...
NP_065 GAQSAAL--QKVKGQER----VRKTSLDLRREIIDVGGIQNLIELRKKRKQKKRDALAAS
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB7 E---PEPEIITEPVDVPTFLKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGH
. :::: :: ::: ::::::.:.:. :.::::.: .. :.::...::::::: ::::
NP_065 HEPPPEPEEITGPVDEETFLKAAVEGKMKVIEKFLADGGSADTCDQFRRTALHRASLEGH
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB7 LAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKLLSTALHV
. :.:::.. :: ..:.: :. ::.::: :::.:.:.::: ..:: ..::::::: :::
NP_065 MEILEKLLDNGATVDFQDRLDCTAMHWACRGGHLEVVKLLQSHGADTNVRDKLLSTPLHV
200 210 220 230 240 250
230 240 250 260 270 280
pF1KB7 AVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLNIKNCAG
:::::. : .::... ..::.:::::: :::::::::::.:.::...:::. :: ::
NP_065 AVRTGQVEIVEHFLSLGLEINARDREGDTALHDAVRLNRYKIIKLLLLHGADMMTKNLAG
260 270 280 290 300 310
290 300 310
pF1KB7 KTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF
::: ::: :: :.
NP_065 KTPTDLVQLWQADTRHALEHPEPGAEHNGLEGPNDSGRETPQPVPAQ
320 330 340 350 360
>>NP_001278147 (OMIM: 610734) ankyrin repeat domain-cont (446 aa)
initn: 1119 init1: 800 opt: 846 Z-score: 575.1 bits: 115.1 E(85289): 2.7e-25
Smith-Waterman score: 846; 48.4% identity (75.1% similar) in 285 aa overlap (20-300:136-414)
10 20 30 40
pF1KB7 MMVLKVEELVTGKKNGNGEAGEFLPEDFR-DGEYEAAVTLEKQEDLKTL
: : : .: :.. . . : :: :
NP_001 ALWPAEAVMDGTMEDSEAVQRATALIEQRLAQEEENEKLRGDARQKLPMDLLVLEDEKHH
110 120 130 140 150 160
50 60 70 80 90 100
pF1KB7 LAHPVTLGEQQWKSEKQREAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYRKTKVPVVK
:. ..: :. :.... ..: .:. : .. .. .. .:.:.:..: .: . ...
NP_001 GAQSAAL--QKVKGQER----VRKTSLDLRREIIDVGGIQNLIELRKKRKQKKRDALAAS
170 180 190 200 210
110 120 130 140 150 160
pF1KB7 E---PEPEIITEPVDVPTFLKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGH
. :::: :: ::: ::::::.:.:. :.::::.: .. :.::...::::::: ::::
NP_001 HEPPPEPEEITGPVDEETFLKAAVEGKMKVIEKFLADGGSADTCDQFRRTALHRASLEGH
220 230 240 250 260 270
170 180 190 200 210 220
pF1KB7 LAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKLLSTALHV
. :.:::.. :: ..:.: :. ::.::: :::.:.:.::: ..:: ..::::::: :::
NP_001 MEILEKLLDNGATVDFQDRLDCTAMHWACRGGHLEVVKLLQSHGADTNVRDKLLSTPLHV
280 290 300 310 320 330
230 240 250 260 270 280
pF1KB7 AVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLNIKNCAG
:::::. : .::... ..::.:::::: :::::::::::.:.::...:::. :: ::
NP_001 AVRTGQVEIVEHFLSLGLEINARDREGDTALHDAVRLNRYKIIKLLLLHGADMMTKNLAG
340 350 360 370 380 390
290 300 310
pF1KB7 KTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF
::: ::: :: :.
NP_001 KTPTDLVQLWQADTRHALEHPEPGAEHNGLEGPNDSGRETPQPVPAQ
400 410 420 430 440
>>NP_659431 (OMIM: 610736) ankyrin repeat domain-contain (305 aa)
initn: 1168 init1: 678 opt: 773 Z-score: 529.7 bits: 106.2 E(85289): 9.1e-23
Smith-Waterman score: 773; 49.6% identity (73.8% similar) in 248 aa overlap (63-300:47-291)
40 50 60 70 80
pF1KB7 YEAAVTLEKQEDLKTLLAHPVTLGEQQWKSEKQREAELKKKKLEQ----RSKLENLEDLE
:: . : ::::::. : .:.:: :::
NP_659 GKVLGFGHGVPDPGAWPSDWRRGPQEAVAREKLKLEEEKKKKLERFNSTRFNLDNLADLE
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB7 IIIQLKKRKKYRKTKVPVVKEPEPEII------TEPVDVPTFLKAALENKLPVVEKFLSD
..: .::: . .:: ..::: . .::: . ::::: ::. ...:.:.:
NP_659 NLVQ--RRKKRLRHRVPP-RKPEPLVKPQSQAQVEPVGLEMFLKAAAENQEYLIDKYLTD
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB7 KNNPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVL
..:.. :. .::::: :::.:: .:.::. ::: .. ::.:. : . :: :::.: .:
NP_659 GGDPNAHDKLHRTALHWACLKGHSQLVNKLLVAGATVDARDLLDRTPVFWACRGGHLVIL
140 150 160 170 180 190
210 220 230 240 250 260
pF1KB7 KLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRL
: :::.::...::::. :: ::::::: : .: :::: : : :::.:.:::: ::.:::
NP_659 KQLLNQGARVNARDKIGSTPLHVAVRTRHPDCLEHLIECGAHLNAQDKEGDTALHEAVRH
200 210 220 230 240 250
270 280 290 300 310
pF1KB7 NRYKMIRLLIMYGADLNIKNCAGKTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF
. :: ..::..:::.:...: :. ::..:. :: : .
NP_659 GSYKAMKLLLLYGAELGVRNAASVTPVQLARDWQRGIREALQAHVAHPRTRC
260 270 280 290 300
>>NP_001123453 (OMIM: 610734) ankyrin repeat domain-cont (327 aa)
initn: 947 init1: 521 opt: 571 Z-score: 398.2 bits: 81.9 E(85289): 1.9e-15
Smith-Waterman score: 658; 41.8% identity (66.0% similar) in 285 aa overlap (20-300:50-295)
10 20 30 40
pF1KB7 MMVLKVEELVTGKKNGNGEAGEFLPEDFR-DGEYEAAVTLEKQEDLKTL
: : : .: :.. . . : :: :
NP_001 ALWPAEAVMDGTMEDSEAVQRATALIEQRLAQEEENEKLRGDARQKLPMDLLVLEDEKHH
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB7 LAHPVTLGEQQWKSEKQREAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYRKTKVPVVK
:. ..: :. :.... ..: .:. : .. .. .. .:.:.:..: .: . ...
NP_001 GAQSAAL--QKVKGQER----VRKTSLDLRREIIDVGGIQNLIELRKKRKQKKRDALAAS
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB7 E---PEPEIITEPVDVPTFLKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGH
. :::: :: ::: ::::::.:.:. :.::::.: .. :.::...::::::: ::::
NP_001 HEPPPEPEEITGPVDEETFLKAAVEGKMKVIEKFLADGGSADTCDQFRRTALHRASLEGH
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB7 LAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKLLSTALHV
. :.:::.. :: ..:.: :. ::.::: :::.:.:.::: ..::
NP_001 MEILEKLLDNGATVDFQDRLDCTAMHWACRGGHLEVVKLLQSHGA---------------
200 210 220 230
230 240 250 260 270 280
pF1KB7 AVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLNIKNCAG
: :..:.:::: :::::::::::.:.::...:::. :: ::
NP_001 ------------------DTNVRDKEGDTALHDAVRLNRYKIIKLLLLHGADMMTKNLAG
240 250 260 270 280
290 300 310
pF1KB7 KTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF
::: ::: :: :.
NP_001 KTPTDLVQLWQADTRHALEHPEPGAEHNGLEGPNDSGRETPQPVPAQ
290 300 310 320
>>NP_001278148 (OMIM: 610734) ankyrin repeat domain-cont (413 aa)
initn: 947 init1: 521 opt: 571 Z-score: 397.0 bits: 82.0 E(85289): 2.3e-15
Smith-Waterman score: 658; 41.8% identity (66.0% similar) in 285 aa overlap (20-300:136-381)
10 20 30 40
pF1KB7 MMVLKVEELVTGKKNGNGEAGEFLPEDFR-DGEYEAAVTLEKQEDLKTL
: : : .: :.. . . : :: :
NP_001 ALWPAEAVMDGTMEDSEAVQRATALIEQRLAQEEENEKLRGDARQKLPMDLLVLEDEKHH
110 120 130 140 150 160
50 60 70 80 90 100
pF1KB7 LAHPVTLGEQQWKSEKQREAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYRKTKVPVVK
:. ..: :. :.... ..: .:. : .. .. .. .:.:.:..: .: . ...
NP_001 GAQSAAL--QKVKGQER----VRKTSLDLRREIIDVGGIQNLIELRKKRKQKKRDALAAS
170 180 190 200 210
110 120 130 140 150 160
pF1KB7 E---PEPEIITEPVDVPTFLKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGH
. :::: :: ::: ::::::.:.:. :.::::.: .. :.::...::::::: ::::
NP_001 HEPPPEPEEITGPVDEETFLKAAVEGKMKVIEKFLADGGSADTCDQFRRTALHRASLEGH
220 230 240 250 260 270
170 180 190 200 210 220
pF1KB7 LAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKLLSTALHV
. :.:::.. :: ..:.: :. ::.::: :::.:.:.::: ..::
NP_001 MEILEKLLDNGATVDFQDRLDCTAMHWACRGGHLEVVKLLQSHGA---------------
280 290 300 310 320
230 240 250 260 270 280
pF1KB7 AVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLNIKNCAG
: :..:.:::: :::::::::::.:.::...:::. :: ::
NP_001 ------------------DTNVRDKEGDTALHDAVRLNRYKIIKLLLLHGADMMTKNLAG
330 340 350 360
290 300 310
pF1KB7 KTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF
::: ::: :: :.
NP_001 KTPTDLVQLWQADTRHALEHPEPGAEHNGLEGPNDSGRETPQPVPAQ
370 380 390 400 410
>>XP_016865986 (OMIM: 610583) PREDICTED: ankyrin repeat (689 aa)
initn: 337 init1: 337 opt: 340 Z-score: 244.3 bits: 54.5 E(85289): 7.2e-07
Smith-Waterman score: 340; 33.8% identity (63.2% similar) in 201 aa overlap (115-315:38-237)
90 100 110 120 130 140
pF1KB7 EDLEIIIQLKKRKKYRKTKVPVVKEPEPEIITEPVDVPTFLKAALENKLPVVEKFLSDKN
.:. .: : :: ...::::. .:.
XP_016 AALSERLLVAAYKGQTENVVQLINKGARVAVTKHGRTPLHL-AANKGHLPVVQILLKAGC
10 20 30 40 50 60
150 160 170 180 190 200
pF1KB7 NPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVLKL
. :: :. .:::::: . :. :. :.. : .. .: .::.: :: : . ::
XP_016 DLDVQDDGDQTALHRATVVGNTEIIAALIHEGCALDRQDKDGNTALHEASWHGFSQSAKL
70 80 90 100 110 120
210 220 230 240 250 260
pF1KB7 LLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNR
:.. ::.. :..: .::::.: ...: . .. :. . . :. ::: :: :. ::.
XP_016 LIKAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTALHVAAALNH
130 140 150 160 170 180
270 280 290 300 310
pF1KB7 YKMIRLLIMYGADLNIKNCAGKTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF
:. ..:. ::: .: : ::.::.. . . .: :.. . . . ::
XP_016 KKVAKILLEAGADTTIVNNAGQTPLETARYHNNPEVALLLTKAPQVLRFSRGRSLRKKRE
190 200 210 220 230 240
XP_016 RLKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAVARKEEAREEFLSASPEPRAKDDRRR
250 260 270 280 290 300
>>XP_016865984 (OMIM: 610583) PREDICTED: ankyrin repeat (694 aa)
initn: 337 init1: 337 opt: 340 Z-score: 244.3 bits: 54.5 E(85289): 7.2e-07
Smith-Waterman score: 340; 33.8% identity (63.2% similar) in 201 aa overlap (115-315:38-237)
90 100 110 120 130 140
pF1KB7 EDLEIIIQLKKRKKYRKTKVPVVKEPEPEIITEPVDVPTFLKAALENKLPVVEKFLSDKN
.:. .: : :: ...::::. .:.
XP_016 AALSERLLVAAYKGQTENVVQLINKGARVAVTKHGRTPLHL-AANKGHLPVVQILLKAGC
10 20 30 40 50 60
150 160 170 180 190 200
pF1KB7 NPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVLKL
. :: :. .:::::: . :. :. :.. : .. .: .::.: :: : . ::
XP_016 DLDVQDDGDQTALHRATVVGNTEIIAALIHEGCALDRQDKDGNTALHEASWHGFSQSAKL
70 80 90 100 110 120
210 220 230 240 250 260
pF1KB7 LLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNR
:.. ::.. :..: .::::.: ...: . .. :. . . :. ::: :: :. ::.
XP_016 LIKAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTALHVAAALNH
130 140 150 160 170 180
270 280 290 300 310
pF1KB7 YKMIRLLIMYGADLNIKNCAGKTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF
:. ..:. ::: .: : ::.::.. . . .: :.. . . . ::
XP_016 KKVAKILLEAGADTTIVNNAGQTPLETARYHNNPEVALLLTKAPQVLRFSRGRSLRKKRE
190 200 210 220 230 240
XP_016 RLKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAVARKEEAREEFLSASPEPRAKDDRRR
250 260 270 280 290 300
>>XP_016865993 (OMIM: 610583) PREDICTED: ankyrin repeat (659 aa)
initn: 855 init1: 331 opt: 338 Z-score: 243.3 bits: 54.3 E(85289): 8.2e-07
Smith-Waterman score: 338; 34.9% identity (64.6% similar) in 189 aa overlap (115-303:38-225)
90 100 110 120 130 140
pF1KB7 EDLEIIIQLKKRKKYRKTKVPVVKEPEPEIITEPVDVPTFLKAALENKLPVVEKFLSDKN
.:. .: : :: ...::::. .:.
XP_016 AALSERLLVAAYKGQTENVVQLINKGARVAVTKHGRTPLHL-AANKGHLPVVQILLKAGC
10 20 30 40 50 60
150 160 170 180 190 200
pF1KB7 NPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVLKL
. :: :. .:::::: . :. :. :.. : .. .: .::.: :: : . ::
XP_016 DLDVQDDGDQTALHRATVVGNTEIIAALIHEGCALDRQDKDGNTALHEASWHGFSQSAKL
70 80 90 100 110 120
210 220 230 240 250 260
pF1KB7 LLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNR
:.. ::.. :..: .::::.: ...: . .. :. . . :. ::: :: :. ::.
XP_016 LIKAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTALHVAAALNH
130 140 150 160 170 180
270 280 290 300 310
pF1KB7 YKMIRLLIMYGADLNIKNCAGKTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF
:. ..:. ::: .: : ::.::.. . . .: :..
XP_016 KKVAKILLEAGADTTIVNNAGQTPLETARYHNNPEVALLLTKAPQGSVSAGDTPSSEQAV
190 200 210 220 230 240
XP_016 ARKEEAREEFLSASPEPRAKDDRRRKSRPKVSAFSDPTPPADQQPGHQKNLHAHNHPKKR
250 260 270 280 290 300
>>XP_016865995 (OMIM: 610583) PREDICTED: ankyrin repeat (656 aa)
initn: 322 init1: 322 opt: 325 Z-score: 234.9 bits: 52.7 E(85289): 2.4e-06
Smith-Waterman score: 325; 32.8% identity (63.5% similar) in 192 aa overlap (124-315:14-204)
100 110 120 130 140 150
pF1KB7 KKRKKYRKTKVPVVKEPEPEIITEPVDVPTFLKAALENKLPVVEKFLSDKNNPDVCDEYK
.: :: ... : ... .:. . ..
XP_016 MSQQDAVAALSERLLVAAYKGQTENVVQLI-NKGARVAVTKHG
10 20 30 40
160 170 180 190 200 210
pF1KB7 RTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVLKLLLNKGAKIS
:: :: : .::: .:. :..:: ... .: ..::.: :. :: ... :...: ..
XP_016 RTPLHLAANKGHLPVVQILLKAGCDLDVQDDGDQTALHRATVVGNTEIIAALIHEGCALD
50 60 70 80 90 100
220 230 240 250 260 270
pF1KB7 ARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIM
.:: .:::: : : . :. :: :.. ::.. ::: :: :. ::. :. ..:.
XP_016 RQDKDGNTALHEASWHGFSQSAKLLIKAGANVLAKNKAGDTALHVAAALNHKKVAKILLE
110 120 130 140 150 160
280 290 300 310
pF1KB7 YGADLNIKNCAGKTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF
::: .: : ::.::.. . . .: :.. . . . ::
XP_016 AGADTTIVNNAGQTPLETARYHNNPEVALLLTKAPQVLRFSRGRSLRKKRERLKEERRAQ
170 180 190 200 210 220
XP_016 SVPRDEVAQSKGSVSAGDTPSSEQAVARKEEAREEFLSASPEPRAKDDRRRKSRPKVSAF
230 240 250 260 270 280
319 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:08:08 2016 done: Sat Nov 5 18:08:09 2016
Total Scan time: 7.930 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]