Result of FASTA (omim) for
pF1KB7628
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7628, 373 aa
1>>>pF1KB7628 373 - 373 aa - 373 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9431+/-0.000294; mu= 7.1914+/- 0.019
mean_var=192.0721+/-39.167, 0's: 0 Z-trim(123.6): 31 B-trim: 0 in 0/56
Lambda= 0.092543
statistics sampled from 43653 (43688) to 43653 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.512), width: 16
Scan time: 10.250
The best scores are: opt bits E(85289)
NP_068770 (OMIM: 602424) doublesex- and mab-3-rela ( 373) 2563 353.8 3.6e-97
XP_006716795 (OMIM: 602424) PREDICTED: doublesex- ( 374) 2551 352.2 1.1e-96
XP_011516073 (OMIM: 602424) PREDICTED: doublesex- ( 389) 1725 242.0 1.8e-63
XP_011516072 (OMIM: 602424) PREDICTED: doublesex- ( 390) 1713 240.4 5.5e-63
XP_011516075 (OMIM: 602424) PREDICTED: doublesex- ( 216) 1447 204.6 1.7e-52
XP_016869864 (OMIM: 602424) PREDICTED: doublesex- ( 215) 1247 177.9 1.9e-44
XP_011516074 (OMIM: 602424) PREDICTED: doublesex- ( 353) 1067 154.1 4.7e-37
XP_011540239 (OMIM: 614804) PREDICTED: doublesex- ( 542) 436 70.0 1.5e-11
NP_115486 (OMIM: 614804) doublesex- and mab-3-rela ( 542) 436 70.0 1.5e-11
NP_071443 (OMIM: 614803) doublesex- and mab-3-rela ( 504) 435 69.8 1.5e-11
NP_001124337 (OMIM: 604935) doublesex- and mab-3-r ( 226) 416 67.0 4.9e-11
XP_016869705 (OMIM: 604935) PREDICTED: doublesex- ( 226) 416 67.0 4.9e-11
NP_006548 (OMIM: 604935) doublesex- and mab-3-rela ( 226) 416 67.0 4.9e-11
XP_016869863 (OMIM: 602424) PREDICTED: doublesex- ( 231) 409 66.1 9.5e-11
XP_016869702 (OMIM: 604935) PREDICTED: doublesex- ( 561) 416 67.3 9.6e-11
NP_870987 (OMIM: 604935) doublesex- and mab-3-rela ( 561) 416 67.3 9.6e-11
XP_011515992 (OMIM: 604935) PREDICTED: doublesex- ( 561) 416 67.3 9.6e-11
XP_011515989 (OMIM: 604935) PREDICTED: doublesex- ( 561) 416 67.3 9.6e-11
XP_016869703 (OMIM: 604935) PREDICTED: doublesex- ( 561) 416 67.3 9.6e-11
XP_016869704 (OMIM: 604935) PREDICTED: doublesex- ( 561) 416 67.3 9.6e-11
NP_067063 (OMIM: 614754) doublesex- and mab-3-rela ( 472) 343 57.5 7.2e-08
XP_011525518 (OMIM: 614806) PREDICTED: doublesex- ( 228) 299 51.4 2.5e-06
NP_001035373 (OMIM: 614806) doublesex- and mab-3-r ( 367) 296 51.2 4.7e-06
XP_016882618 (OMIM: 614806) PREDICTED: doublesex- ( 372) 296 51.2 4.7e-06
XP_016882614 (OMIM: 614806) PREDICTED: doublesex- ( 418) 296 51.2 5.1e-06
XP_016882616 (OMIM: 614806) PREDICTED: doublesex- ( 418) 296 51.2 5.1e-06
XP_016882615 (OMIM: 614806) PREDICTED: doublesex- ( 418) 296 51.2 5.1e-06
XP_016882617 (OMIM: 614806) PREDICTED: doublesex- ( 418) 296 51.2 5.1e-06
XP_016882613 (OMIM: 614806) PREDICTED: doublesex- ( 421) 296 51.2 5.1e-06
XP_016882612 (OMIM: 614806) PREDICTED: doublesex- ( 423) 296 51.2 5.2e-06
NP_149056 (OMIM: 614805) doublesex- and mab-3-rela ( 342) 280 49.0 1.9e-05
>>NP_068770 (OMIM: 602424) doublesex- and mab-3-related (373 aa)
initn: 2563 init1: 2563 opt: 2563 Z-score: 1865.4 bits: 353.8 E(85289): 3.6e-97
Smith-Waterman score: 2563; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KB7 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 SDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 GRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 GRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SGEVGNPLGGSPVKNSLRGLPGPYVPGQTGNQWQMKNMENRHAMSSQYRMHSYYPPPSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 SGEVGNPLGGSPVKNSLRGLPGPYVPGQTGNQWQMKNMENRHAMSSQYRMHSYYPPPSYL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 GQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 GQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEP
310 320 330 340 350 360
370
pF1KB7 SSFTVTPVIEEDE
:::::::::::::
NP_068 SSFTVTPVIEEDE
370
>>XP_006716795 (OMIM: 602424) PREDICTED: doublesex- and (374 aa)
initn: 1915 init1: 1915 opt: 2551 Z-score: 1856.8 bits: 352.2 E(85289): 1.1e-96
Smith-Waterman score: 2551; 99.7% identity (99.7% similar) in 374 aa overlap (1-373:1-374)
10 20 30 40 50 60
pF1KB7 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 GRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSA
190 200 210 220 230 240
250 260 270 280 290
pF1KB7 SGEVGNPLGGSPVKNSLRGLPGPYVPGQTGNQWQ-MKNMENRHAMSSQYRMHSYYPPPSY
:::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
XP_006 SGEVGNPLGGSPVKNSLRGLPGPYVPGQTGNQWQQMKNMENRHAMSSQYRMHSYYPPPSY
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB7 LGQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LGQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASE
310 320 330 340 350 360
360 370
pF1KB7 PSSFTVTPVIEEDE
::::::::::::::
XP_006 PSSFTVTPVIEEDE
370
>>XP_011516073 (OMIM: 602424) PREDICTED: doublesex- and (389 aa)
initn: 1725 init1: 1725 opt: 1725 Z-score: 1260.5 bits: 242.0 E(85289): 1.8e-63
Smith-Waterman score: 1725; 99.2% identity (100.0% similar) in 257 aa overlap (117-373:133-389)
90 100 110 120 130 140
pF1KB7 PLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEELGISHPIPLPSAAELL
..::::::::::::::::::::::::::::
XP_011 GLPRDPRARVPTELGGFIALEESSGSSLPPSEVALRRQQAQEEELGISHPIPLPSAAELL
110 120 130 140 150 160
150 160 170 180 190 200
pF1KB7 VKRENNGSNPCLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VKRENNGSNPCLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSD
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB7 STYYSSFYQPSLFPYYNNLYNCPQYSMALAADSASGEVGNPLGGSPVKNSLRGLPGPYVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STYYSSFYQPSLFPYYNNLYNCPQYSMALAADSASGEVGNPLGGSPVKNSLRGLPGPYVP
230 240 250 260 270 280
270 280 290 300 310 320
pF1KB7 GQTGNQWQMKNMENRHAMSSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQTGNQWQMKNMENRHAMSSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFSP
290 300 310 320 330 340
330 340 350 360 370
pF1KB7 PSSQDSGLVSLSSSSPISNKSTKAVLECEPASEPSSFTVTPVIEEDE
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSSQDSGLVSLSSSSPISNKSTKAVLECEPASEPSSFTVTPVIEEDE
350 360 370 380
>>XP_011516072 (OMIM: 602424) PREDICTED: doublesex- and (390 aa)
initn: 1101 init1: 1077 opt: 1713 Z-score: 1251.9 bits: 240.4 E(85289): 5.5e-63
Smith-Waterman score: 1713; 98.8% identity (99.6% similar) in 258 aa overlap (117-373:133-390)
90 100 110 120 130 140
pF1KB7 PLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEELGISHPIPLPSAAELL
..::::::::::::::::::::::::::::
XP_011 GLPRDPRARVPTELGGFIALEESSGSSLPPSEVALRRQQAQEEELGISHPIPLPSAAELL
110 120 130 140 150 160
150 160 170 180 190 200
pF1KB7 VKRENNGSNPCLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VKRENNGSNPCLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSD
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB7 STYYSSFYQPSLFPYYNNLYNCPQYSMALAADSASGEVGNPLGGSPVKNSLRGLPGPYVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STYYSSFYQPSLFPYYNNLYNCPQYSMALAADSASGEVGNPLGGSPVKNSLRGLPGPYVP
230 240 250 260 270 280
270 280 290 300 310 320
pF1KB7 GQTGNQWQ-MKNMENRHAMSSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFS
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQTGNQWQQMKNMENRHAMSSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFS
290 300 310 320 330 340
330 340 350 360 370
pF1KB7 PPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEPSSFTVTPVIEEDE
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEPSSFTVTPVIEEDE
350 360 370 380 390
>>XP_011516075 (OMIM: 602424) PREDICTED: doublesex- and (216 aa)
initn: 811 init1: 811 opt: 1447 Z-score: 1063.3 bits: 204.6 E(85289): 1.7e-52
Smith-Waterman score: 1447; 99.5% identity (99.5% similar) in 216 aa overlap (159-373:1-216)
130 140 150 160 170 180
pF1KB7 EELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASEGRMVIQDI
::::::::::::::::::::::::::::::
XP_011 MTECSGTSQPPPASVPTTAASEGRMVIQDI
10 20 30
190 200 210 220 230 240
pF1KB7 PAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSASGEVGNPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSASGEVGNPL
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB7 GGSPVKNSLRGLPGPYVPGQTGNQWQ-MKNMENRHAMSSQYRMHSYYPPPSYLGQSVPQF
:::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
XP_011 GGSPVKNSLRGLPGPYVPGQTGNQWQQMKNMENRHAMSSQYRMHSYYPPPSYLGQSVPQF
100 110 120 130 140 150
310 320 330 340 350 360
pF1KB7 FTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEPSSFTVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEPSSFTVTP
160 170 180 190 200 210
370
pF1KB7 VIEEDE
::::::
XP_011 VIEEDE
>>XP_016869864 (OMIM: 602424) PREDICTED: doublesex- and (215 aa)
initn: 1314 init1: 1247 opt: 1247 Z-score: 919.0 bits: 177.9 E(85289): 1.9e-44
Smith-Waterman score: 1247; 99.4% identity (100.0% similar) in 180 aa overlap (1-180:1-180)
10 20 30 40 50 60
pF1KB7 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_016 LRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 GRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSA
XP_016 EEHGEPPCNELPVQDAFLLPASLLPGPERAPVLHF
190 200 210
>>XP_011516074 (OMIM: 602424) PREDICTED: doublesex- and (353 aa)
initn: 1091 init1: 1067 opt: 1067 Z-score: 786.3 bits: 154.1 E(85289): 4.7e-37
Smith-Waterman score: 1067; 98.7% identity (100.0% similar) in 158 aa overlap (117-274:133-290)
90 100 110 120 130 140
pF1KB7 PLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEELGISHPIPLPSAAELL
..::::::::::::::::::::::::::::
XP_011 GLPRDPRARVPTELGGFIALEESSGSSLPPSEVALRRQQAQEEELGISHPIPLPSAAELL
110 120 130 140 150 160
150 160 170 180 190 200
pF1KB7 VKRENNGSNPCLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VKRENNGSNPCLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSD
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB7 STYYSSFYQPSLFPYYNNLYNCPQYSMALAADSASGEVGNPLGGSPVKNSLRGLPGPYVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STYYSSFYQPSLFPYYNNLYNCPQYSMALAADSASGEVGNPLGGSPVKNSLRGLPGPYVP
230 240 250 260 270 280
270 280 290 300 310 320
pF1KB7 GQTGNQWQMKNMENRHAMSSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFSP
::::::::
XP_011 GQTGNQWQYSRRPAVKILAWFPSRAALLLVTRAQRQCLNVSLRRSPAASQSLPSSRRTSE
290 300 310 320 330 340
>>XP_011540239 (OMIM: 614804) PREDICTED: doublesex- and (542 aa)
initn: 436 init1: 393 opt: 436 Z-score: 328.5 bits: 70.0 E(85289): 1.5e-11
Smith-Waterman score: 439; 34.5% identity (58.2% similar) in 275 aa overlap (14-272:5-275)
10 20 30 40 50
pF1KB7 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGS---SRGGGSG
:: : .::. . : . : ......:....:..: : .::
XP_011 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLL
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 SGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAA
: : ...: :: :::::::::: .: ::::::.: :.:: : ::.:::::::::::
XP_011 RGPPLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 QVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNP------CLMTECSGTSQPPPA
::::::::::::. . . : ..:: :. :: : . . :.. . : :
XP_011 QVALRRQQAQEENEARELQL-LYGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 SVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNC-PQ
..: :. : . . .. . . : . .. .: : . : . . :
XP_011 GAP---AGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPG
180 190 200 210 220
240 250 260 270 280
pF1KB7 YSMALAADSASGEVGN--PLGGSPV----KNSLRGLPGPYVPGQTGNQWQMKNMENRHAM
: . ....: :. ..:::. :.. . :: :: :..
XP_011 TSSPEVRPGSGSENGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSE
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB7 SSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPIS
XP_011 SGSEADKEEGEAAPAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAI
290 300 310 320 330 340
>>NP_115486 (OMIM: 614804) doublesex- and mab-3-related (542 aa)
initn: 436 init1: 393 opt: 436 Z-score: 328.5 bits: 70.0 E(85289): 1.5e-11
Smith-Waterman score: 439; 34.5% identity (58.2% similar) in 275 aa overlap (14-272:5-275)
10 20 30 40 50
pF1KB7 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGS---SRGGGSG
:: : .::. . : . : ......:....:..: : .::
NP_115 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLL
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 SGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAA
: : ...: :: :::::::::: .: ::::::.: :.:: : ::.:::::::::::
NP_115 RGPPLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 QVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNP------CLMTECSGTSQPPPA
::::::::::::. . . : ..:: :. :: : . . :.. . : :
NP_115 QVALRRQQAQEENEARELQL-LYGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 SVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNC-PQ
..: :. : . . .. . . : . .. .: : . : . . :
NP_115 GAP---AGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPG
180 190 200 210 220
240 250 260 270 280
pF1KB7 YSMALAADSASGEVGN--PLGGSPV----KNSLRGLPGPYVPGQTGNQWQMKNMENRHAM
: . ....: :. ..:::. :.. . :: :: :..
NP_115 TSSPEVRPGSGSENGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSE
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB7 SSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPIS
NP_115 SGSEADKEEGEAAPAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAI
290 300 310 320 330 340
>>NP_071443 (OMIM: 614803) doublesex- and mab-3-related (504 aa)
initn: 442 init1: 407 opt: 435 Z-score: 328.2 bits: 69.8 E(85289): 1.5e-11
Smith-Waterman score: 435; 57.9% identity (72.2% similar) in 126 aa overlap (10-129:28-150)
10 20 30
pF1KB7 MPNDEAFSKPSTPSEAPHAPG---VPPQG-RAGG-FGKASGA
: :: : .:. ::: : . : .:..:
NP_071 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 LVGAASGSS-AGGSSRGGGSGSGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCM
..::...: .:: . : ::.. .: : :: :::::::::: .: ::::::::
NP_071 AAAAAAATSGSGGCPPAPGLESGVGAVGCG---YPRTPKCARCRNHGVVSALKGHKRFCR
70 80 90 100 110
100 110 120 130 140 150
pF1KB7 WRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNP
:::: : ::.:::::::::::::::::::::::
NP_071 WRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGGGG
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB7 CLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQP
NP_071 RAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNGQE
180 190 200 210 220 230
373 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:03:44 2016 done: Fri Nov 4 09:03:45 2016
Total Scan time: 10.250 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]