Result of FASTA (omim) for
pF1KB7588
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7588, 289 aa
1>>>pF1KB7588 289 - 289 aa - 289 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4493+/-0.000342; mu= 3.1277+/- 0.022
mean_var=217.7530+/-44.832, 0's: 0 Z-trim(122.0): 251 B-trim: 26 in 1/56
Lambda= 0.086914
statistics sampled from 39251 (39543) to 39251 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.787), E-opt: 0.2 (0.464), width: 16
Scan time: 7.650
The best scores are: opt bits E(85289)
NP_005212 (OMIM: 220600,600028) homeobox protein D ( 289) 1970 258.9 8.1e-69
XP_016867292 (OMIM: 220600,600028) PREDICTED: home ( 161) 1088 148.1 1e-35
XP_005250242 (OMIM: 220600,600028) PREDICTED: home ( 161) 1088 148.1 1e-35
NP_005211 (OMIM: 104510,190320,600525) homeobox pr ( 287) 888 123.2 5.6e-28
NP_004396 (OMIM: 126255) homeobox protein DLX-2 [H ( 328) 783 110.1 5.7e-24
NP_005213 (OMIM: 600030) homeobox protein DLX-6 [H ( 293) 517 76.7 5.8e-14
NP_835221 (OMIM: 600029) homeobox protein DLX-1 is ( 255) 476 71.5 1.8e-12
NP_612138 (OMIM: 601911,616788) homeobox protein D ( 240) 382 59.7 6.2e-09
XP_016879780 (OMIM: 601911,616788) PREDICTED: home ( 168) 376 58.8 8.1e-09
NP_001925 (OMIM: 601911,616788) homeobox protein D ( 168) 376 58.8 8.1e-09
NP_002440 (OMIM: 123101,168500,168550,604757) home ( 267) 346 55.3 1.5e-07
NP_002439 (OMIM: 106600,142983,189500,608874) home ( 303) 287 47.9 2.8e-05
XP_011541345 (OMIM: 604823) PREDICTED: homeobox pr ( 233) 282 47.2 3.6e-05
NP_003649 (OMIM: 604823) homeobox protein BarH-lik ( 279) 282 47.2 4.1e-05
NP_002135 (OMIM: 142968,614744) homeobox protein H ( 301) 268 45.5 0.00015
NP_006252 (OMIM: 262600,601538) homeobox protein p ( 226) 263 44.8 0.00018
NP_149416 (OMIM: 607808) homeobox protein Nkx-2.4 ( 354) 264 45.1 0.00024
NP_660328 (OMIM: 606727) homeobox protein Nkx-2.3 ( 364) 261 44.7 0.00031
NP_068745 (OMIM: 605420,609597,613451,615529) home ( 411) 260 44.6 0.00037
NP_002136 (OMIM: 142967) homeobox protein Hox-B2 [ ( 356) 256 44.1 0.00047
NP_067545 (OMIM: 603260) homeobox protein BarH-lik ( 254) 253 43.6 0.00048
NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 255 43.9 0.00048
NP_005513 (OMIM: 142955,601536) homeobox protein H ( 335) 253 43.7 0.00059
NP_001256 (OMIM: 600297) homeobox protein CDX-2 [H ( 313) 251 43.4 0.00066
NP_001129743 (OMIM: 217095,611770) homeobox protei ( 301) 250 43.3 0.0007
NP_001091639 (OMIM: 611074) brain-specific homeobo ( 233) 247 42.8 0.00076
XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 250 43.4 0.00094
NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 250 43.4 0.00094
NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 250 43.4 0.00094
XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 250 43.4 0.00094
XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 250 43.4 0.00094
XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 250 43.4 0.00094
XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 250 43.4 0.00094
NP_004378 (OMIM: 108900,187500,217095,225250,60058 ( 324) 247 42.9 0.00097
XP_006712540 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 247 43.0 0.0012
NP_008829 (OMIM: 142980) homeobox protein Hox-D3 [ ( 432) 247 43.0 0.0012
XP_011509367 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 247 43.0 0.0012
XP_005246567 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 247 43.0 0.0012
XP_005246566 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 247 43.0 0.0012
XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 247 43.0 0.0012
XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 247 43.0 0.0012
XP_005246570 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 247 43.0 0.0012
XP_005257332 (OMIM: 142967) PREDICTED: homeobox pr ( 247) 242 42.2 0.0012
NP_003308 (OMIM: 118700,188550,600635,610978) home ( 371) 245 42.7 0.0013
XP_016868632 (OMIM: 610772) PREDICTED: homeobox pr ( 265) 242 42.2 0.0013
NP_001073136 (OMIM: 118700,188550,600635,610978) h ( 401) 245 42.7 0.0013
XP_011533177 (OMIM: 600297) PREDICTED: homeobox pr ( 321) 243 42.4 0.0014
NP_001180 (OMIM: 602183,613330) homeobox protein N ( 333) 238 41.8 0.0022
NP_796374 (OMIM: 605955) homeobox protein Nkx-6.2 ( 277) 236 41.5 0.0022
XP_006723629 (OMIM: 604612) PREDICTED: homeobox pr ( 202) 233 41.0 0.0023
>>NP_005212 (OMIM: 220600,600028) homeobox protein DLX-5 (289 aa)
initn: 1970 init1: 1970 opt: 1970 Z-score: 1356.4 bits: 258.9 E(85289): 8.1e-69
Smith-Waterman score: 1970; 100.0% identity (100.0% similar) in 289 aa overlap (1-289:1-289)
10 20 30 40 50 60
pF1KB7 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYSPTGGAPHGYCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYSPTGGAPHGYCS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQPEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPQGSSRSLSHHPHAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPQGSSRSLSHHPHAH
190 200 210 220 230 240
250 260 270 280
pF1KB7 PPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHPLALASGTLY
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHPLALASGTLY
250 260 270 280
>>XP_016867292 (OMIM: 220600,600028) PREDICTED: homeobox (161 aa)
initn: 1088 init1: 1088 opt: 1088 Z-score: 762.1 bits: 148.1 E(85289): 1e-35
Smith-Waterman score: 1088; 100.0% identity (100.0% similar) in 161 aa overlap (129-289:1-161)
100 110 120 130 140 150
pF1KB7 SSYHQYGGAYNRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQK
::::::::::::::::::::::::::::::
XP_016 MVNGKPKKVRKPRTIYSSFQLAALQRRFQK
10 20 30
160 170 180 190 200 210
pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB7 QSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQ
100 110 120 130 140 150
280
pF1KB7 HPLALASGTLY
:::::::::::
XP_016 HPLALASGTLY
160
>>XP_005250242 (OMIM: 220600,600028) PREDICTED: homeobox (161 aa)
initn: 1088 init1: 1088 opt: 1088 Z-score: 762.1 bits: 148.1 E(85289): 1e-35
Smith-Waterman score: 1088; 100.0% identity (100.0% similar) in 161 aa overlap (129-289:1-161)
100 110 120 130 140 150
pF1KB7 SSYHQYGGAYNRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQK
::::::::::::::::::::::::::::::
XP_005 MVNGKPKKVRKPRTIYSSFQLAALQRRFQK
10 20 30
160 170 180 190 200 210
pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB7 QSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQ
100 110 120 130 140 150
280
pF1KB7 HPLALASGTLY
:::::::::::
XP_005 HPLALASGTLY
160
>>NP_005211 (OMIM: 104510,190320,600525) homeobox protei (287 aa)
initn: 816 init1: 629 opt: 888 Z-score: 623.2 bits: 123.2 E(85289): 5.6e-28
Smith-Waterman score: 888; 53.8% identity (73.6% similar) in 288 aa overlap (1-279:1-274)
10 20 30 40 50
pF1KB7 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYSPTGGAP-HGYC
:.: :::.. :: . ...: . : :..::::::::.:: ::: :: : :
NP_005 MSGSFDRKLSSILTD-----ISSSLSCHAGSKDSPTLPESSVTDLGYYS----APQHDYY
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 SPTSASYGKALNPYQYQYH-GVNGSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQP
: . ::...::: :... ..:: ::. . ..:.:..::.::: :: . : ...:
NP_005 S--GQPYGQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGASYRQYG-AYREQPLPAQDP
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 E--KEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGL
:: : :::::::::::::::::::::.:::::::::::.:::::::::::::.:::
NP_005 VSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 TQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPQGSSRSLSHH
:::::::::::.:::.::..::::.: ::::..:: :::::: :::.:. .. : .
NP_005 TQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALWDTSSHSTPAPAR
170 180 190 200 210 220
240 250 260 270 280
pF1KB7 PHAHPPTSNQSPASSYLEN-SASWYTSAASSINSHL---PP-PGSLQHPLALASGTLY
. :: : . :::.. . ::: . : . :: :: :..:.:
NP_005 SQLPPPLP-YSASPSYLDDPTNSWYHAQNLS-GPHLQQQPPQPATLHHASPGPPPNPGAV
230 240 250 260 270 280
NP_005 Y
>>NP_004396 (OMIM: 126255) homeobox protein DLX-2 [Homo (328 aa)
initn: 713 init1: 600 opt: 783 Z-score: 551.3 bits: 110.1 E(85289): 5.7e-24
Smith-Waterman score: 783; 52.2% identity (71.1% similar) in 270 aa overlap (23-280:43-302)
10 20 30 40
pF1KB7 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYS---
.:...:.: ::::::: :.::::.::.
NP_004 HSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKP-QESPTLPVSTATDSSYYTNQQ
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB7 -PTGGAPHGYCSPTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAY
:.::. : :: :.. .. :::: :.:. : ::. : .:...: .:.
NP_004 HPAGGGGGGG-SP----YAH-MGSYQYQASGLNNVP--YSAKSSYDLGYTAAYTSYAPYG
80 90 100 110 120
110 120 130 140 150 160
pF1KB7 NRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA
. :.:.:::: :::.:.:::::::::::::::::::::::::::::::::::::::
NP_004 TSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB7 ELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP--QSPAVWE-
:::::::::::::::::::.:::.::. :.::.: :. :..: : :: ..:: :.
NP_004 ELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDF
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB7 --PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHP
:: :.. : : :. : :.: . .. :: ....: ::: . : ::
NP_004 GVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SHLQATAPLLHP
250 260 270 280 290 300
pF1KB7 LALASGTLY
NP_004 TQTPQPHHHHHHHGGGGAPVSAGTIF
310 320
>>NP_005213 (OMIM: 600030) homeobox protein DLX-6 [Homo (293 aa)
initn: 537 init1: 427 opt: 517 Z-score: 371.7 bits: 76.7 E(85289): 5.8e-14
Smith-Waterman score: 545; 40.8% identity (63.8% similar) in 265 aa overlap (18-262:30-281)
10 20 30 40
pF1KB7 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYY
: : . ... .: : : :.
NP_005 MMTMTTMADGLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQPPPPPPPPPQPHSQQS
10 20 30 40 50 60
50 60 70 80 90
pF1KB7 SPTGGAPHG--YCSPTSASYGKA----LNPYQYQYHG---VNGSAGSYPAKAYADYSYAS
::. .. : .: ..:. . : . .:...:: ..:...:: .. : : : :
NP_005 SPAMAGAHYPLHCLHSAAAAAAAGSHHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMS
70 80 90 100 110 120
100 110 120 130 140
pF1KB7 ---------SYHQYGGAYNRVPSATNQPEKEVTEP-EVRMVNGKPKKVRKPRTIYSSFQL
:::. ..: . . :.: . : : :.:. ::: ::.:::::::::.::
NP_005 HSQHSPYLQSYHNSSAAAQTRGDDTDQQKTTVIENGEIRF-NGKGKKIRKPRTIYSSLQL
130 140 150 160 170
150 160 170 180 190 200
pF1KB7 AALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSP-S
::..:::.:::::::::::::::::::::::::::::::::.::..:.: : : .: .
NP_005 QALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHESDPLQ
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB7 SSDPMACNSPQSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSIN
.: .. :: : ::. ..:....: :: .::. . . ::.:
NP_005 GSAALSPRSPALPPVWDVSASAKGVSM-----PP-------NSYMPGYSHWYSSPHQDTM
240 250 260 270 280
270 280
pF1KB7 SHLPPPGSLQHPLALASGTLY
NP_005 QRPQMM
290
>>NP_835221 (OMIM: 600029) homeobox protein DLX-1 isofor (255 aa)
initn: 430 init1: 389 opt: 476 Z-score: 344.7 bits: 71.5 E(85289): 1.8e-12
Smith-Waterman score: 501; 43.7% identity (63.5% similar) in 252 aa overlap (36-263:5-244)
10 20 30 40 50 60
pF1KB7 DRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPES--SATDSDYYSPTGGAPHGYCSPTS
:.::: : ... : :. ::.
NP_835 MTMTTMPESLNSPVSGKAVFMEFGPPNQQMSPSP
10 20 30
70 80 90 100
pF1KB7 ASYGK-ALNPYQYQYH----GVNGSAGS------YP----AKAYADYSYASSYHQYGG--
:.:. ... . : :. .::.: :: ....:. : :: ..: :
NP_835 MSHGHYSMHCLHSAGHSQPDGAYSSASSFSRPLGYPYVNSVSSHASSPYISSVQSYPGSA
40 50 60 70 80 90
110 120 130 140 150 160
pF1KB7 --AYNRV--PSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYL
: .:. :.: .. : :::. ::: ::.:::::::::.:: ::.::::.::::
NP_835 SLAQSRLEDPGADSEKSTVVEGGEVRF-NGKGKKIRKPRTIYSSLQLQALNRRFQQTQYL
100 110 120 130 140 150
170 180 190 200 210 220
pF1KB7 ALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSP-SSSDPMACNSPQSP
:::::::::::::::::::::::::::::.::.::.: : : ... .. .:: :
NP_835 ALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGGAALEGSALANGRALSAGSPPVP
160 170 180 190 200 210
230 240 250 260 270 280
pF1KB7 AVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHPL
:.:..:: . : . :.::. . .::: ::
NP_835 PGWNPNSSSGKGSG-----------GNAGSYIPSYTSWYPSAHQEAMQQPQLM
220 230 240 250
pF1KB7 ALASGTLY
>>NP_612138 (OMIM: 601911,616788) homeobox protein DLX-4 (240 aa)
initn: 370 init1: 342 opt: 382 Z-score: 281.4 bits: 59.7 E(85289): 6.2e-09
Smith-Waterman score: 389; 35.8% identity (57.9% similar) in 240 aa overlap (35-267:19-233)
10 20 30 40 50 60
pF1KB7 FDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYSPTGGAPHGYCSPT--
: : .. . : : : .: ::.
NP_612 MTSLPCPLPGRDASKAVFPDLAPVPSVAAAY--PLGLSPTTAASPNLS
10 20 30 40
70 80 90 100 110
pF1KB7 -SASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAYNRVPS---ATNQP
: ::. :. : : . . :. .: . . .. : . . :. : ..
NP_612 YSRPYGHLLS---YPY-----TEPANPGDSYLSCQQPAALSQPLCGPAEHPQELEADSEK
50 60 70 80 90
120 130 140 150 160 170
pF1KB7 EKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQ
. :: : .. ::.:::::::::.:: :..:::.::::::::::.:::.:::::
NP_612 PRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQ
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB7 TQVKIWFQNKRSKIKKIMKNGEMPPEHS-PSSSDPMACNSPQSPAVWEPQGSSRSLSHHP
::::::::::::: ::..:.. : . :. . .. :: :..:.
NP_612 TQVKIWFQNKRSKYKKLLKQNSGGQEGDFPGRTFSVSPCSPPLPSLWDL-----------
160 170 180 190 200
240 250 260 270 280
pF1KB7 HAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHPLALASGTLY
: .. :.:.: .. ..:: .:..
NP_612 ----PKAGTLPTSGYGNSFGAWYQHHSSDVLASPQMM
210 220 230 240
>>XP_016879780 (OMIM: 601911,616788) PREDICTED: homeobox (168 aa)
initn: 342 init1: 342 opt: 376 Z-score: 279.3 bits: 58.8 E(85289): 8.1e-09
Smith-Waterman score: 383; 43.9% identity (66.9% similar) in 157 aa overlap (112-267:21-161)
90 100 110 120 130 140
pF1KB7 GSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPR
: ...: . :: : .. ::.::::
XP_016 MKLSVLPPRSLLAPYTVLCCPPDSEKP-RLSPEPSERRPQAPAKKLRKPR
10 20 30 40
150 160 170 180 190 200
pF1KB7 TIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEM
:::::.:: :..:::.::::::::::.:::.:::::::::::::::::: ::..:..
XP_016 TIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQNSG
50 60 70 80 90 100
210 220 230 240 250 260
pF1KB7 PPEHS-PSSSDPMACNSPQSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWY
: . :. . .. :: :..:. : .. :.:.: .. ..::
XP_016 GQEGDFPGRTFSVSPCSPPLPSLWDL---------------PKAGTLPTSGYGNSFGAWY
110 120 130 140 150
270 280
pF1KB7 TSAASSINSHLPPPGSLQHPLALASGTLY
.:..
XP_016 QHHSSDVLASPQMM
160
>>NP_001925 (OMIM: 601911,616788) homeobox protein DLX-4 (168 aa)
initn: 342 init1: 342 opt: 376 Z-score: 279.3 bits: 58.8 E(85289): 8.1e-09
Smith-Waterman score: 383; 43.9% identity (66.9% similar) in 157 aa overlap (112-267:21-161)
90 100 110 120 130 140
pF1KB7 GSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPR
: ...: . :: : .. ::.::::
NP_001 MKLSVLPPRSLLAPYTVLCCPPDSEKP-RLSPEPSERRPQAPAKKLRKPR
10 20 30 40
150 160 170 180 190 200
pF1KB7 TIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEM
:::::.:: :..:::.::::::::::.:::.:::::::::::::::::: ::..:..
NP_001 TIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQNSG
50 60 70 80 90 100
210 220 230 240 250 260
pF1KB7 PPEHS-PSSSDPMACNSPQSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWY
: . :. . .. :: :..:. : .. :.:.: .. ..::
NP_001 GQEGDFPGRTFSVSPCSPPLPSLWDL---------------PKAGTLPTSGYGNSFGAWY
110 120 130 140 150
270 280
pF1KB7 TSAASSINSHLPPPGSLQHPLALASGTLY
.:..
NP_001 QHHSSDVLASPQMM
160
289 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:53:14 2016 done: Fri Nov 4 08:53:15 2016
Total Scan time: 7.650 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]