Result of FASTA (ccds) for
pF1KB7588
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7588, 289 aa
1>>>pF1KB7588 289 - 289 aa - 289 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5075+/-0.000848; mu= 2.2072+/- 0.052
mean_var=193.7614+/-40.628, 0's: 0 Z-trim(114.2): 175 B-trim: 782 in 1/50
Lambda= 0.092138
statistics sampled from 14609 (14797) to 14609 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.78), E-opt: 0.2 (0.455), width: 16
Scan time: 2.880
The best scores are: opt bits E(32554)
CCDS5647.1 DLX5 gene_id:1749|Hs108|chr7 ( 289) 1970 273.5 1.3e-73
CCDS11556.1 DLX3 gene_id:1747|Hs108|chr17 ( 287) 888 129.7 2.5e-30
CCDS2248.1 DLX2 gene_id:1746|Hs108|chr2 ( 328) 783 115.7 4.4e-26
CCDS47647.2 DLX6 gene_id:1750|Hs108|chr7 ( 293) 517 80.3 1.8e-15
CCDS2247.2 DLX1 gene_id:1745|Hs108|chr2 ( 255) 476 74.9 7e-14
>>CCDS5647.1 DLX5 gene_id:1749|Hs108|chr7 (289 aa)
initn: 1970 init1: 1970 opt: 1970 Z-score: 1435.2 bits: 273.5 E(32554): 1.3e-73
Smith-Waterman score: 1970; 100.0% identity (100.0% similar) in 289 aa overlap (1-289:1-289)
10 20 30 40 50 60
pF1KB7 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYSPTGGAPHGYCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYSPTGGAPHGYCS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQPEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPQGSSRSLSHHPHAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPQGSSRSLSHHPHAH
190 200 210 220 230 240
250 260 270 280
pF1KB7 PPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHPLALASGTLY
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHPLALASGTLY
250 260 270 280
>>CCDS11556.1 DLX3 gene_id:1747|Hs108|chr17 (287 aa)
initn: 816 init1: 629 opt: 888 Z-score: 657.9 bits: 129.7 E(32554): 2.5e-30
Smith-Waterman score: 888; 53.8% identity (73.6% similar) in 288 aa overlap (1-279:1-274)
10 20 30 40 50
pF1KB7 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYSPTGGAP-HGYC
:.: :::.. :: . ...: . : :..::::::::.:: ::: :: : :
CCDS11 MSGSFDRKLSSILTD-----ISSSLSCHAGSKDSPTLPESSVTDLGYYS----APQHDYY
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 SPTSASYGKALNPYQYQYH-GVNGSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQP
: . ::...::: :... ..:: ::. . ..:.:..::.::: :: . : ...:
CCDS11 S--GQPYGQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGASYRQYG-AYREQPLPAQDP
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 E--KEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGL
:: : :::::::::::::::::::::.:::::::::::.:::::::::::::.:::
CCDS11 VSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 TQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPQGSSRSLSHH
:::::::::::.:::.::..::::.: ::::..:: :::::: :::.:. .. : .
CCDS11 TQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALWDTSSHSTPAPAR
170 180 190 200 210 220
240 250 260 270 280
pF1KB7 PHAHPPTSNQSPASSYLEN-SASWYTSAASSINSHL---PP-PGSLQHPLALASGTLY
. :: : . :::.. . ::: . : . :: :: :..:.:
CCDS11 SQLPPPLP-YSASPSYLDDPTNSWYHAQNLS-GPHLQQQPPQPATLHHASPGPPPNPGAV
230 240 250 260 270 280
CCDS11 Y
>>CCDS2248.1 DLX2 gene_id:1746|Hs108|chr2 (328 aa)
initn: 713 init1: 600 opt: 783 Z-score: 581.7 bits: 115.7 E(32554): 4.4e-26
Smith-Waterman score: 783; 52.2% identity (71.1% similar) in 270 aa overlap (23-280:43-302)
10 20 30 40
pF1KB7 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYS---
.:...:.: ::::::: :.::::.::.
CCDS22 HSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKP-QESPTLPVSTATDSSYYTNQQ
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB7 -PTGGAPHGYCSPTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAY
:.::. : :: :.. .. :::: :.:. : ::. : .:...: .:.
CCDS22 HPAGGGGGGG-SP----YAH-MGSYQYQASGLNNVP--YSAKSSYDLGYTAAYTSYAPYG
80 90 100 110 120
110 120 130 140 150 160
pF1KB7 NRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA
. :.:.:::: :::.:.:::::::::::::::::::::::::::::::::::::::
CCDS22 TSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB7 ELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP--QSPAVWE-
:::::::::::::::::::.:::.::. :.::.: :. :..: : :: ..:: :.
CCDS22 ELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDF
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB7 --PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHP
:: :.. : : :. : :.: . .. :: ....: ::: . : ::
CCDS22 GVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SHLQATAPLLHP
250 260 270 280 290 300
pF1KB7 LALASGTLY
CCDS22 TQTPQPHHHHHHHGGGGAPVSAGTIF
310 320
>>CCDS47647.2 DLX6 gene_id:1750|Hs108|chr7 (293 aa)
initn: 537 init1: 427 opt: 517 Z-score: 391.3 bits: 80.3 E(32554): 1.8e-15
Smith-Waterman score: 545; 40.8% identity (63.8% similar) in 265 aa overlap (18-262:30-281)
10 20 30 40
pF1KB7 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYY
: : . ... .: : : :.
CCDS47 MMTMTTMADGLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQPPPPPPPPPQPHSQQS
10 20 30 40 50 60
50 60 70 80 90
pF1KB7 SPTGGAPHG--YCSPTSASYGKA----LNPYQYQYHG---VNGSAGSYPAKAYADYSYAS
::. .. : .: ..:. . : . .:...:: ..:...:: .. : : : :
CCDS47 SPAMAGAHYPLHCLHSAAAAAAAGSHHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMS
70 80 90 100 110 120
100 110 120 130 140
pF1KB7 ---------SYHQYGGAYNRVPSATNQPEKEVTEP-EVRMVNGKPKKVRKPRTIYSSFQL
:::. ..: . . :.: . : : :.:. ::: ::.:::::::::.::
CCDS47 HSQHSPYLQSYHNSSAAAQTRGDDTDQQKTTVIENGEIRF-NGKGKKIRKPRTIYSSLQL
130 140 150 160 170
150 160 170 180 190 200
pF1KB7 AALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSP-S
::..:::.:::::::::::::::::::::::::::::::::.::..:.: : : .: .
CCDS47 QALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHESDPLQ
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB7 SSDPMACNSPQSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSIN
.: .. :: : ::. ..:....: :: .::. . . ::.:
CCDS47 GSAALSPRSPALPPVWDVSASAKGVSM-----PP-------NSYMPGYSHWYSSPHQDTM
240 250 260 270 280
270 280
pF1KB7 SHLPPPGSLQHPLALASGTLY
CCDS47 QRPQMM
290
>>CCDS2247.2 DLX1 gene_id:1745|Hs108|chr2 (255 aa)
initn: 430 init1: 389 opt: 476 Z-score: 362.7 bits: 74.9 E(32554): 7e-14
Smith-Waterman score: 501; 43.7% identity (63.5% similar) in 252 aa overlap (36-263:5-244)
10 20 30 40 50 60
pF1KB7 DRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPES--SATDSDYYSPTGGAPHGYCSPTS
:.::: : ... : :. ::.
CCDS22 MTMTTMPESLNSPVSGKAVFMEFGPPNQQMSPSP
10 20 30
70 80 90 100
pF1KB7 ASYGK-ALNPYQYQYH----GVNGSAGS------YP----AKAYADYSYASSYHQYGG--
:.:. ... . : :. .::.: :: ....:. : :: ..: :
CCDS22 MSHGHYSMHCLHSAGHSQPDGAYSSASSFSRPLGYPYVNSVSSHASSPYISSVQSYPGSA
40 50 60 70 80 90
110 120 130 140 150 160
pF1KB7 --AYNRV--PSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYL
: .:. :.: .. : :::. ::: ::.:::::::::.:: ::.::::.::::
CCDS22 SLAQSRLEDPGADSEKSTVVEGGEVRF-NGKGKKIRKPRTIYSSLQLQALNRRFQQTQYL
100 110 120 130 140 150
170 180 190 200 210 220
pF1KB7 ALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSP-SSSDPMACNSPQSP
:::::::::::::::::::::::::::::.::.::.: : : ... .. .:: :
CCDS22 ALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGGAALEGSALANGRALSAGSPPVP
160 170 180 190 200 210
230 240 250 260 270 280
pF1KB7 AVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHPL
:.:..:: . : . :.::. . .::: ::
CCDS22 PGWNPNSSSGKGSG-----------GNAGSYIPSYTSWYPSAHQEAMQQPQLM
220 230 240 250
pF1KB7 ALASGTLY
289 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:53:13 2016 done: Fri Nov 4 08:53:13 2016
Total Scan time: 2.880 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]