Result of FASTA (omim) for
pF1KB7572
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7572, 280 aa
1>>>pF1KB7572 280 - 280 aa - 280 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.5907+/-0.000345; mu= -6.8822+/- 0.022
mean_var=329.5588+/-67.530, 0's: 0 Z-trim(125.8): 36 B-trim: 1652 in 1/61
Lambda= 0.070649
statistics sampled from 50418 (50458) to 50418 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.848), E-opt: 0.2 (0.592), width: 16
Scan time: 8.050
The best scores are: opt bits E(85289)
NP_005574 (OMIM: 151440) protein lyl-1 [Homo sapie ( 280) 1958 212.0 9.9e-55
XP_016882305 (OMIM: 151440) PREDICTED: protein lyl ( 351) 1958 212.1 1.2e-54
XP_016882306 (OMIM: 151440) PREDICTED: protein lyl ( 302) 1651 180.8 2.8e-45
XP_005259969 (OMIM: 151440) PREDICTED: protein lyl ( 206) 1413 156.4 4.1e-38
NP_003180 (OMIM: 187040,613065) T-cell acute lymph ( 331) 485 62.0 1.8e-09
XP_005271217 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 485 62.0 1.8e-09
NP_001277333 (OMIM: 187040,613065) T-cell acute ly ( 331) 485 62.0 1.8e-09
XP_016857679 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 485 62.0 1.8e-09
XP_016857678 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 485 62.0 1.8e-09
NP_001274276 (OMIM: 187040,613065) T-cell acute ly ( 331) 485 62.0 1.8e-09
XP_016857680 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 485 62.0 1.8e-09
XP_016857676 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 485 62.0 1.8e-09
XP_016857677 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 485 62.0 1.8e-09
NP_001277334 (OMIM: 187040,613065) T-cell acute ly ( 331) 485 62.0 1.8e-09
NP_001277332 (OMIM: 187040,613065) T-cell acute ly ( 331) 485 62.0 1.8e-09
XP_016857682 (OMIM: 187040,613065) PREDICTED: T-ce ( 172) 437 56.8 3.2e-08
NP_001277335 (OMIM: 187040,613065) T-cell acute ly ( 172) 437 56.8 3.2e-08
NP_005412 (OMIM: 186855,613065) T-cell acute lymph ( 108) 330 45.8 4.3e-05
>>NP_005574 (OMIM: 151440) protein lyl-1 [Homo sapiens] (280 aa)
initn: 1958 init1: 1958 opt: 1958 Z-score: 1103.6 bits: 212.0 E(85289): 9.9e-55
Smith-Waterman score: 1958; 100.0% identity (100.0% similar) in 280 aa overlap (1-280:1-280)
10 20 30 40 50 60
pF1KB7 MCPPQAQAEVGPTMTEKAEMVCAPSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPPGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MCPPQAQAEVGPTMTEKAEMVCAPSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPPGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSG
190 200 210 220 230 240
250 260 270 280
pF1KB7 RRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR
::::::::::::::::::::::::::::::::::::::::
NP_005 RRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR
250 260 270 280
>>XP_016882305 (OMIM: 151440) PREDICTED: protein lyl-1 i (351 aa)
initn: 1958 init1: 1958 opt: 1958 Z-score: 1102.3 bits: 212.1 E(85289): 1.2e-54
Smith-Waterman score: 1958; 100.0% identity (100.0% similar) in 280 aa overlap (1-280:72-351)
10 20 30
pF1KB7 MCPPQAQAEVGPTMTEKAEMVCAPSPAPAP
::::::::::::::::::::::::::::::
XP_016 SLKQLWSTFRDSNGKNRRVILEVSTPTSGSMCPPQAQAEVGPTMTEKAEMVCAPSPAPAP
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB7 PPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVAMPTTELGTLRPPLLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVAMPTTELGTLRPPLLQL
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB7 STLGTAPPTLALHYHPHPFLNSVYIGPAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STLGTAPPTLALHYHPHPFLNSVYIGPAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVA
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB7 RRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQA
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB7 AALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPGGAARPIKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPGGAARPIKM
290 300 310 320 330 340
280
pF1KB7 EQTALSPEVR
::::::::::
XP_016 EQTALSPEVR
350
>>XP_016882306 (OMIM: 151440) PREDICTED: protein lyl-1 i (302 aa)
initn: 1651 init1: 1651 opt: 1651 Z-score: 934.0 bits: 180.8 E(85289): 2.8e-45
Smith-Waterman score: 1651; 99.6% identity (100.0% similar) in 240 aa overlap (41-280:63-302)
20 30 40 50 60 70
pF1KB7 GPTMTEKAEMVCAPSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRP
.:::::::::::::::::::::::::::::
XP_016 GGCLQWEWGSLKQLWSTFRDSNGKNRRVILEVEEVGHRGGSSPPRLPPGVPVISLGHSRP
40 50 60 70 80 90
80 90 100 110 120 130
pF1KB7 PGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGPFSIFPSSRLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGPFSIFPSSRLK
100 110 120 130 140 150
140 150 160 170 180 190
pF1KB7 RRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNE
160 170 180 190 200 210
200 210 220 230 240 250
pF1KB7 VLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQ
220 230 240 250 260 270
260 270 280
pF1KB7 PAPPADPDGSPGGAARPIKMEQTALSPEVR
::::::::::::::::::::::::::::::
XP_016 PAPPADPDGSPGGAARPIKMEQTALSPEVR
280 290 300
>>XP_005259969 (OMIM: 151440) PREDICTED: protein lyl-1 i (206 aa)
initn: 1413 init1: 1413 opt: 1413 Z-score: 805.2 bits: 156.4 E(85289): 4.1e-38
Smith-Waterman score: 1413; 100.0% identity (100.0% similar) in 206 aa overlap (75-280:1-206)
50 60 70 80 90 100
pF1KB7 VGHRGGSSPPRLPPGVPVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHY
::::::::::::::::::::::::::::::
XP_005 MPTTELGTLRPPLLQLSTLGTAPPTLALHY
10 20 30
110 120 130 140 150 160
pF1KB7 HPHPFLNSVYIGPAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HPHPFLNSVYIGPAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQ
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB7 NVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRK
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB7 RPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR
160 170 180 190 200
>>NP_003180 (OMIM: 187040,613065) T-cell acute lymphocyt (331 aa)
initn: 418 init1: 369 opt: 485 Z-score: 291.2 bits: 62.0 E(85289): 1.8e-09
Smith-Waterman score: 499; 39.3% identity (57.9% similar) in 285 aa overlap (1-267:26-301)
10 20
pF1KB7 MCPPQAQAEVGPTMTEKAEMVCAPSPA------PA
: ::. : . : .. . : :. .
NP_003 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNG-VAKETSRAAAAEPPVIELGARGG
10 20 30 40 50
30 40 50 60 70 80
pF1KB7 PPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVA-MPTTELGTLRPP--
: ::. : . :. .... : ::. : :::: : :. : . :
NP_003 PGGGPAGGGGAARDLKGRDAATAEAR--HRVPTTEL--CRPPGPAPAPAPASVTAELPGD
60 70 80 90 100 110
90 100 110 120 130
pF1KB7 --LLQLSTLGTAPPTL---ALHY---HPHPFLNSVYIGPAGPFSIFPSS-RLKRRPSHCE
..::: . : :. :: : .: :.: ..: : .: .. :.::::: :
NP_003 GRMVQLSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYE
120 130 140 150 160 170
140 150 160 170 180 190
pF1KB7 LDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMK
.....: . ::.::.:::::::::::::::::::::::.::::::.::::::.::::::
NP_003 MEITDGPHT-KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMK
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB7 YIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADP
::.::..:: :: : : :: . :. :.: . .. .: ..
NP_003 YINFLAKLLNDQEEE---GTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSC
240 250 260 270 280 290
260 270 280
pF1KB7 DGSPGGAARPIKMEQTALSPEVR
.: ::: :
NP_003 GSSLDGAASPDSYTEEPAPKHTARSLHPAMLPAADGAGPR
300 310 320 330
>>XP_005271217 (OMIM: 187040,613065) PREDICTED: T-cell a (331 aa)
initn: 418 init1: 369 opt: 485 Z-score: 291.2 bits: 62.0 E(85289): 1.8e-09
Smith-Waterman score: 499; 39.3% identity (57.9% similar) in 285 aa overlap (1-267:26-301)
10 20
pF1KB7 MCPPQAQAEVGPTMTEKAEMVCAPSPA------PA
: ::. : . : .. . : :. .
XP_005 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNG-VAKETSRAAAAEPPVIELGARGG
10 20 30 40 50
30 40 50 60 70 80
pF1KB7 PPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVA-MPTTELGTLRPP--
: ::. : . :. .... : ::. : :::: : :. : . :
XP_005 PGGGPAGGGGAARDLKGRDAATAEAR--HRVPTTEL--CRPPGPAPAPAPASVTAELPGD
60 70 80 90 100 110
90 100 110 120 130
pF1KB7 --LLQLSTLGTAPPTL---ALHY---HPHPFLNSVYIGPAGPFSIFPSS-RLKRRPSHCE
..::: . : :. :: : .: :.: ..: : .: .. :.::::: :
XP_005 GRMVQLSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYE
120 130 140 150 160 170
140 150 160 170 180 190
pF1KB7 LDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMK
.....: . ::.::.:::::::::::::::::::::::.::::::.::::::.::::::
XP_005 MEITDGPHT-KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMK
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB7 YIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADP
::.::..:: :: : : :: . :. :.: . .. .: ..
XP_005 YINFLAKLLNDQEEE---GTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSC
240 250 260 270 280 290
260 270 280
pF1KB7 DGSPGGAARPIKMEQTALSPEVR
.: ::: :
XP_005 GSSLDGAASPDSYTEEPAPKHTARSLHPAMLPAADGAGPR
300 310 320 330
>>NP_001277333 (OMIM: 187040,613065) T-cell acute lympho (331 aa)
initn: 418 init1: 369 opt: 485 Z-score: 291.2 bits: 62.0 E(85289): 1.8e-09
Smith-Waterman score: 499; 39.3% identity (57.9% similar) in 285 aa overlap (1-267:26-301)
10 20
pF1KB7 MCPPQAQAEVGPTMTEKAEMVCAPSPA------PA
: ::. : . : .. . : :. .
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNG-VAKETSRAAAAEPPVIELGARGG
10 20 30 40 50
30 40 50 60 70 80
pF1KB7 PPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVA-MPTTELGTLRPP--
: ::. : . :. .... : ::. : :::: : :. : . :
NP_001 PGGGPAGGGGAARDLKGRDAATAEAR--HRVPTTEL--CRPPGPAPAPAPASVTAELPGD
60 70 80 90 100 110
90 100 110 120 130
pF1KB7 --LLQLSTLGTAPPTL---ALHY---HPHPFLNSVYIGPAGPFSIFPSS-RLKRRPSHCE
..::: . : :. :: : .: :.: ..: : .: .. :.::::: :
NP_001 GRMVQLSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYE
120 130 140 150 160 170
140 150 160 170 180 190
pF1KB7 LDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMK
.....: . ::.::.:::::::::::::::::::::::.::::::.::::::.::::::
NP_001 MEITDGPHT-KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMK
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB7 YIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADP
::.::..:: :: : : :: . :. :.: . .. .: ..
NP_001 YINFLAKLLNDQEEE---GTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSC
240 250 260 270 280 290
260 270 280
pF1KB7 DGSPGGAARPIKMEQTALSPEVR
.: ::: :
NP_001 GSSLDGAASPDSYTEEPAPKHTARSLHPAMLPAADGAGPR
300 310 320 330
>>XP_016857679 (OMIM: 187040,613065) PREDICTED: T-cell a (331 aa)
initn: 418 init1: 369 opt: 485 Z-score: 291.2 bits: 62.0 E(85289): 1.8e-09
Smith-Waterman score: 499; 39.3% identity (57.9% similar) in 285 aa overlap (1-267:26-301)
10 20
pF1KB7 MCPPQAQAEVGPTMTEKAEMVCAPSPA------PA
: ::. : . : .. . : :. .
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNG-VAKETSRAAAAEPPVIELGARGG
10 20 30 40 50
30 40 50 60 70 80
pF1KB7 PPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVA-MPTTELGTLRPP--
: ::. : . :. .... : ::. : :::: : :. : . :
XP_016 PGGGPAGGGGAARDLKGRDAATAEAR--HRVPTTEL--CRPPGPAPAPAPASVTAELPGD
60 70 80 90 100 110
90 100 110 120 130
pF1KB7 --LLQLSTLGTAPPTL---ALHY---HPHPFLNSVYIGPAGPFSIFPSS-RLKRRPSHCE
..::: . : :. :: : .: :.: ..: : .: .. :.::::: :
XP_016 GRMVQLSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYE
120 130 140 150 160 170
140 150 160 170 180 190
pF1KB7 LDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMK
.....: . ::.::.:::::::::::::::::::::::.::::::.::::::.::::::
XP_016 MEITDGPHT-KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMK
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB7 YIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADP
::.::..:: :: : : :: . :. :.: . .. .: ..
XP_016 YINFLAKLLNDQEEE---GTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSC
240 250 260 270 280 290
260 270 280
pF1KB7 DGSPGGAARPIKMEQTALSPEVR
.: ::: :
XP_016 GSSLDGAASPDSYTEEPAPKHTARSLHPAMLPAADGAGPR
300 310 320 330
>>XP_016857678 (OMIM: 187040,613065) PREDICTED: T-cell a (331 aa)
initn: 418 init1: 369 opt: 485 Z-score: 291.2 bits: 62.0 E(85289): 1.8e-09
Smith-Waterman score: 499; 39.3% identity (57.9% similar) in 285 aa overlap (1-267:26-301)
10 20
pF1KB7 MCPPQAQAEVGPTMTEKAEMVCAPSPA------PA
: ::. : . : .. . : :. .
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNG-VAKETSRAAAAEPPVIELGARGG
10 20 30 40 50
30 40 50 60 70 80
pF1KB7 PPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVA-MPTTELGTLRPP--
: ::. : . :. .... : ::. : :::: : :. : . :
XP_016 PGGGPAGGGGAARDLKGRDAATAEAR--HRVPTTEL--CRPPGPAPAPAPASVTAELPGD
60 70 80 90 100 110
90 100 110 120 130
pF1KB7 --LLQLSTLGTAPPTL---ALHY---HPHPFLNSVYIGPAGPFSIFPSS-RLKRRPSHCE
..::: . : :. :: : .: :.: ..: : .: .. :.::::: :
XP_016 GRMVQLSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYE
120 130 140 150 160 170
140 150 160 170 180 190
pF1KB7 LDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMK
.....: . ::.::.:::::::::::::::::::::::.::::::.::::::.::::::
XP_016 MEITDGPHT-KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMK
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB7 YIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADP
::.::..:: :: : : :: . :. :.: . .. .: ..
XP_016 YINFLAKLLNDQEEE---GTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSC
240 250 260 270 280 290
260 270 280
pF1KB7 DGSPGGAARPIKMEQTALSPEVR
.: ::: :
XP_016 GSSLDGAASPDSYTEEPAPKHTARSLHPAMLPAADGAGPR
300 310 320 330
>>NP_001274276 (OMIM: 187040,613065) T-cell acute lympho (331 aa)
initn: 418 init1: 369 opt: 485 Z-score: 291.2 bits: 62.0 E(85289): 1.8e-09
Smith-Waterman score: 499; 39.3% identity (57.9% similar) in 285 aa overlap (1-267:26-301)
10 20
pF1KB7 MCPPQAQAEVGPTMTEKAEMVCAPSPA------PA
: ::. : . : .. . : :. .
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNG-VAKETSRAAAAEPPVIELGARGG
10 20 30 40 50
30 40 50 60 70 80
pF1KB7 PPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVA-MPTTELGTLRPP--
: ::. : . :. .... : ::. : :::: : :. : . :
NP_001 PGGGPAGGGGAARDLKGRDAATAEAR--HRVPTTEL--CRPPGPAPAPAPASVTAELPGD
60 70 80 90 100 110
90 100 110 120 130
pF1KB7 --LLQLSTLGTAPPTL---ALHY---HPHPFLNSVYIGPAGPFSIFPSS-RLKRRPSHCE
..::: . : :. :: : .: :.: ..: : .: .. :.::::: :
NP_001 GRMVQLSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYE
120 130 140 150 160 170
140 150 160 170 180 190
pF1KB7 LDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMK
.....: . ::.::.:::::::::::::::::::::::.::::::.::::::.::::::
NP_001 MEITDGPHT-KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMK
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB7 YIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADP
::.::..:: :: : : :: . :. :.: . .. .: ..
NP_001 YINFLAKLLNDQEEE---GTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSC
240 250 260 270 280 290
260 270 280
pF1KB7 DGSPGGAARPIKMEQTALSPEVR
.: ::: :
NP_001 GSSLDGAASPDSYTEEPAPKHTARSLHPAMLPAADGAGPR
300 310 320 330
280 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:48:16 2016 done: Fri Nov 4 08:48:18 2016
Total Scan time: 8.050 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]