FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7270, 213 aa
  1>>>pF1KB7270 213 - 213 aa - 213 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.7821+/-0.000721; mu= 3.2687+/- 0.044
 mean_var=129.0272+/-25.520, 0's: 0 Z-trim(113.6): 11  B-trim: 8 in 1/54
 Lambda= 0.112910
 statistics sampled from 14229 (14237) to 14229 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.784), E-opt: 0.2 (0.437), width:  16
 Scan time:  1.740

The best scores are:                                      opt bits E(32554)
CCDS6642.1 ZFAND5 gene_id:7763|Hs108|chr9          ( 213) 1457 247.5 4.6e-66
CCDS10313.1 ZFAND6 gene_id:54469|Hs108|chr15       ( 208)  783 137.7 5.1e-33
CCDS58395.1 ZFAND6 gene_id:54469|Hs108|chr15       ( 196)  484 89.0 2.2e-18


>>CCDS6642.1 ZFAND5 gene_id:7763|Hs108|chr9               (213 aa)
 initn: 1457 init1: 1457 opt: 1457  Z-score: 1299.5  bits: 247.5 E(32554): 4.6e-66
Smith-Waterman score: 1457; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)

               10        20        30        40        50        60
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
              130       140       150       160       170       180

              190       200       210   
pF1KB7 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
       :::::::::::::::::::::::::::::::::
CCDS66 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
              190       200       210   

>>CCDS10313.1 ZFAND6 gene_id:54469|Hs108|chr15            (208 aa)
 initn: 830 init1: 415 opt: 783  Z-score: 706.3  bits: 137.7 E(32554): 5.1e-33
Smith-Waterman score: 783; 58.5% identity (76.5% similar) in 217 aa overlap (1-213:1-208)

               10        20        30        40         50         
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP
       ::::::..  :::::::::::::::::::::::::::::::..: ::.:: .:   : : 
CCDS10 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS
               10        20        30        40        50          

      60        70        80        90       100         110       
pF1KB7 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI--SREDKITTPKT
        :.:  :: .: :. . ..:  ::: . .  ::.    .:..   :.  :. :. .. :.
CCDS10 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVS----NQSLLSESVASSQLDSTSVDKA
        60        70        80        90           100       110   

        120       130       140       150       160       170      
pF1KB7 -EVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCG
          .: : .. : ...:::  ::  :. : :: :::::::::::::::::.:::::..::
CCDS10 VPETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCG
           120       130         140       150       160       170 

        180       190       200       210   
pF1KB7 LHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
       .::::: ::: :.:::.:: ::::::::::.::::.:
CCDS10 VHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI
             180       190       200        

>>CCDS58395.1 ZFAND6 gene_id:54469|Hs108|chr15            (196 aa)
 initn: 804 init1: 415 opt: 484  Z-score: 443.5  bits: 89.0 E(32554): 2.2e-18
Smith-Waterman score: 743; 56.7% identity (73.7% similar) in 217 aa overlap (1-213:1-196)

               10        20        30        40         50         
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP
       ::::::..  :::::::::::::::::::::::::::::::..: ::.::         :
CCDS58 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISP---------P
               10        20        30        40        50          

      60        70        80        90       100         110       
pF1KB7 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI--SREDKITTPKT
             :: .: :. . ..:  ::: . .  ::.    .:..   :.  :. :. .. :.
CCDS58 ------VQCTDGSVPEAQSALDSTSSSMQPSPVS----NQSLLSESVASSQLDSTSVDKA
                    60        70            80        90       100 

        120       130       140       150       160       170      
pF1KB7 -EVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCG
          .: : .. : ...:::  ::  :. : :: :::::::::::::::::.:::::..::
CCDS58 VPETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCG
             110       120         130       140       150         

        180       190       200       210   
pF1KB7 LHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
       .::::: ::: :.:::.:: ::::::::::.::::.:
CCDS58 VHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI
     160       170       180       190      




213 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:31:13 2016 done: Fri Nov  4 06:31:14 2016
 Total Scan time:  1.740 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]