Result of FASTA (ccds) for
pF1KB7262
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7262, 451 aa
1>>>pF1KB7262 451 - 451 aa - 451 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7513+/-0.000794; mu= 13.8239+/- 0.048
mean_var=154.0546+/-29.737, 0's: 0 Z-trim(115.4): 40 B-trim: 99 in 2/49
Lambda= 0.103332
statistics sampled from 15897 (15937) to 15897 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.806), E-opt: 0.2 (0.49), width: 16
Scan time: 3.620
The best scores are: opt bits E(32554)
CCDS8234.1 CHRDL2 gene_id:25884|Hs108|chr11 ( 451) 3335 508.5 5.8e-144
CCDS60893.1 CHRDL2 gene_id:25884|Hs108|chr11 ( 429) 2790 427.2 1.6e-119
CCDS14553.1 CHRDL1 gene_id:91851|Hs108|chrX ( 456) 1107 176.3 5.6e-44
CCDS48150.1 CHRDL1 gene_id:91851|Hs108|chrX ( 457) 1105 176.0 6.9e-44
CCDS48149.1 CHRDL1 gene_id:91851|Hs108|chrX ( 458) 1099 175.1 1.3e-43
CCDS48148.2 CHRDL1 gene_id:91851|Hs108|chrX ( 378) 578 97.4 2.7e-20
>>CCDS8234.1 CHRDL2 gene_id:25884|Hs108|chr11 (451 aa)
initn: 3335 init1: 3335 opt: 3335 Z-score: 2698.1 bits: 508.5 E(32554): 5.8e-144
Smith-Waterman score: 3335; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451)
10 20 30 40 50 60
pF1KB7 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 CTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEASE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 QSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTTV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 KIVLKEKHKKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTEYPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 KIVLKEKHKKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTEYPC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 RHPEKVAGKCCKICPEDKADPGHSEISSTRCPKAPGRVLVHTSVSPSPDNLRRFALEHEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 RHPEKVAGKCCKICPEDKADPGHSEISSTRCPKAPGRVLVHTSVSPSPDNLRRFALEHEA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 SDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEARLPERGTALPTARWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 SDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEARLPERGTALPTARWP
370 380 390 400 410 420
430 440 450
pF1KB7 PRRSLERLPSPDPGAEGHGQSRQSDQDITKT
:::::::::::::::::::::::::::::::
CCDS82 PRRSLERLPSPDPGAEGHGQSRQSDQDITKT
430 440 450
>>CCDS60893.1 CHRDL2 gene_id:25884|Hs108|chr11 (429 aa)
initn: 2790 init1: 2790 opt: 2790 Z-score: 2259.3 bits: 427.2 E(32554): 1.6e-119
Smith-Waterman score: 2790; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KB7 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 CTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEASE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 QSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTTV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 KIVLKEKHKKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTEYPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KIVLKEKHKKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTEYPC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 RHPEKVAGKCCKICPEDKADPGHSEISSTRCPKAPGRVLVHTSVSPSPDNLRRFALEHEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 RHPEKVAGKCCKICPEDKADPGHSEISSTRCPKAPGRVLVHTSVSPSPDNLRRFALEHEA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 SDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEARLPERGTALPTARWP
:::::::::::::
CCDS60 SDLVEIYLWKLVKGIFHLTQIKKVRKQDFQKEAQHFRLLAGPHEGHWNVFLAQTLELKVT
370 380 390 400 410 420
>>CCDS14553.1 CHRDL1 gene_id:91851|Hs108|chrX (456 aa)
initn: 1003 init1: 626 opt: 1107 Z-score: 903.0 bits: 176.3 E(32554): 5.6e-44
Smith-Waterman score: 1107; 42.6% identity (68.3% similar) in 357 aa overlap (30-373:34-383)
10 20 30 40 50
pF1KB7 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCL
. .:.:. :.: :: ::::::: ::.::.
CCDS14 KWKMGGMKYIFSLLFFLLLEGGKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 RCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQ
: :::...: : :..:: ::: .:: :. :::.: . : . .. :::..::: ::
CCDS14 NCICSENGNVLCSRVRCPNVHCLSPVHIPHLCCPRCPDSLPPVNNKVTSKSCEYNGTTYQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 HGEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEAS
:::.: :. :: .: ::::. :::.::..:::: :::. : :. .:::::..:. ..
CCDS14 HGELFVAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRGDGE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 EQSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIP--RHFR-----P
. .. :. :.: . . . .:. : :. .. :: .: : :
CCDS14 LSWEHSDG----DIFRQPANREARHS-YHRSHYDPPPSRQAGGLSRFPGARSHRGALMDS
190 200 210 220 230
240 250 260 270 280 290
pF1KB7 KGAGSTTVKIVLKEKHK--KACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQ
. :..: :.::...::: ..:: .:::::::: ::: .:::: . :.::::. .:.:.
CCDS14 QQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECK
240 250 260 270 280 290
300 310 320 330 340
pF1KB7 RVTCPTEYPCRHPEKVAGKCCKICPEDKAD--PGHS-EISSTRCPKAPGRVLVHTSV-SP
.. ::..:::..:.:. :::::.:: :: ::.: . .. : . . :. ::
CCDS14 KIHCPNRYPCKYPQKIDGKCCKVCPGKKAKELPGQSFDNKGYFCGEET--MPVYESVFME
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB7 SPDNLRRFALEHEASDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEAR
. .. :..::: : ::...: . :
CCDS14 DGETTRKIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELPHFKLVTRTTLSQW
360 370 380 390 400 410
>>CCDS48150.1 CHRDL1 gene_id:91851|Hs108|chrX (457 aa)
initn: 1003 init1: 626 opt: 1105 Z-score: 901.4 bits: 176.0 E(32554): 6.9e-44
Smith-Waterman score: 1105; 42.5% identity (68.2% similar) in 358 aa overlap (30-373:34-384)
10 20 30 40 50
pF1KB7 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCL
. .:.:. :.: :: ::::::: ::.::.
CCDS48 KWKMGGMKYIFSLLFFLLLEGGKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 RCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQ
: :::...: : :..:: ::: .:: :. :::.: . : . .. :::..::: ::
CCDS48 NCICSENGNVLCSRVRCPNVHCLSPVHIPHLCCPRCPDSLPPVNNKVTSKSCEYNGTTYQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 HGEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEAS
:::.: :. :: .: ::::. :::.::..:::: :::. : :. .:::::..:. ..
CCDS48 HGELFVAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRGDGE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 EQSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIP--RHFR-----P
. .. :. :.: . . . .:. : :. .. :: .: : :
CCDS48 LSWEHSDG----DIFRQPANREARHS-YHRSHYDPPPSRQAGGLSRFPGARSHRGALMDS
190 200 210 220 230
240 250 260 270 280 290
pF1KB7 KGAGSTTVKIVLKEKHK--KACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQ
. :..: :.::...::: ..:: .:::::::: ::: .:::: . :.::::. .:.:.
CCDS48 QQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECK
240 250 260 270 280 290
300 310 320 330 340
pF1KB7 RVTCPTEYPCRHPEKVAGKCCKICPEDKAD---PGHS-EISSTRCPKAPGRVLVHTSV-S
.. ::..:::..:.:. :::::.:: :: ::.: . .. : . . :. ::
CCDS48 KIHCPNRYPCKYPQKIDGKCCKVCPGKKAKEELPGQSFDNKGYFCGEET--MPVYESVFM
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB7 PSPDNLRRFALEHEASDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEA
. .. :..::: : ::...: . :
CCDS48 EDGETTRKIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELPHFKLVTRTTLSQ
360 370 380 390 400 410
>>CCDS48149.1 CHRDL1 gene_id:91851|Hs108|chrX (458 aa)
initn: 1042 init1: 391 opt: 1099 Z-score: 896.5 bits: 175.1 E(32554): 1.3e-43
Smith-Waterman score: 1100; 42.6% identity (68.0% similar) in 359 aa overlap (30-373:34-385)
10 20 30 40 50
pF1KB7 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCL
. .:.:. :.: :: ::::::: ::.::.
CCDS48 KWKMGGMKYIFSLLFFLLLEGGKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 RCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPS-GLRAPPKSCQHNGTMY
: :::...: : :..:: ::: .:: :. :::.: : : . .. :::..::: :
CCDS48 NCICSENGNVLCSRVRCPNVHCLSPVHIPHLCCPRCPEDSLPPVNNKVTSKSCEYNGTTY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 QHGEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEA
::::.: :. :: .: ::::. :::.::..:::: :::. : :. .:::::..:. ..
CCDS48 QHGELFVAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRGDG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 SEQSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIP--RHFR-----
. .. :. :.: . . . .:. : :. .. :: .: : :
CCDS48 ELSWEHSDG----DIFRQPANREARHS-YHRSHYDPPPSRQAGGLSRFPGARSHRGALMD
190 200 210 220 230
240 250 260 270 280
pF1KB7 PKGAGSTTVKIVLKEKHK--KACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDC
. :..: :.::...::: ..:: .:::::::: ::: .:::: . :.::::. .:.:
CCDS48 SQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQEC
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB7 QRVTCPTEYPCRHPEKVAGKCCKICPEDKAD---PGHS-EISSTRCPKAPGRVLVHTSV-
... ::..:::..:.:. :::::.:: :: ::.: . .. : . . :. ::
CCDS48 KKIHCPNRYPCKYPQKIDGKCCKVCPGKKAKEELPGQSFDNKGYFCGEET--MPVYESVF
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB7 SPSPDNLRRFALEHEASDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQE
. .. :..::: : ::...: . :
CCDS48 MEDGETTRKIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELPHFKLVTRTTLS
360 370 380 390 400 410
>>CCDS48148.2 CHRDL1 gene_id:91851|Hs108|chrX (378 aa)
initn: 703 init1: 391 opt: 578 Z-score: 477.8 bits: 97.4 E(32554): 2.7e-20
Smith-Waterman score: 661; 33.0% identity (55.3% similar) in 351 aa overlap (30-373:34-305)
10 20 30 40 50
pF1KB7 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCL
. .:.:. :.: :: ::::::: ::.::.
CCDS48 KWKMGGMKYIFSLLFFLLLEGGKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 RCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQ
: :::...: : :..:: ::: .:: :. :::.: :.
CCDS48 NCICSENGNVLCSRVRCPNVHCLSPVHIPHLCCPRC-----PGD----------------
70 80 90 100
120 130 140 150 160 170
pF1KB7 HGEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEAS
::. : ..:.:.
CCDS48 -GELSWEH----------------SDGDIF------------------------------
110
180 190 200 210 220 230
pF1KB7 EQSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTT
.: .... .: : .. : . .: .: ::. . : : .. . :..:
CCDS48 RQPANREARHSYHRSHYDPPPSRQAGGLSRFPGARSHRG--ALMD-------SQQASGTI
120 130 140 150 160
240 250 260 270 280 290
pF1KB7 VKIVLKEKHK--KACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTE
:.::...::: ..:: .:::::::: ::: .:::: . :.::::. .:.:... ::..
CCDS48 VQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECKKIHCPNR
170 180 190 200 210 220
300 310 320 330 340 350
pF1KB7 YPCRHPEKVAGKCCKICPEDKAD---PGHS-EISSTRCPKAPGRVLVHTSV-SPSPDNLR
:::..:.:. :::::.:: :: ::.: . .. : . . :. :: . .. :
CCDS48 YPCKYPQKIDGKCCKVCPGKKAKEELPGQSFDNKGYFCGEET--MPVYESVFMEDGETTR
230 240 250 260 270 280
360 370 380 390 400 410
pF1KB7 RFALEHEASDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEARLPERGT
..::: : ::...: . :
CCDS48 KIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELPHFKLVTRTTLSQWKIFTEG
290 300 310 320 330 340
451 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 06:26:41 2016 done: Fri Nov 4 06:26:41 2016
Total Scan time: 3.620 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]