FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7250, 148 aa
  1>>>pF1KB7250 148 - 148 aa - 148 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.8903+/-0.000594; mu= 7.7703+/- 0.036
 mean_var=150.9817+/-30.205, 0's: 0 Z-trim(118.3): 2  B-trim: 0 in 0/53
 Lambda= 0.104379
 statistics sampled from 19266 (19268) to 19266 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.867), E-opt: 0.2 (0.592), width:  16
 Scan time:  1.980

The best scores are:                                      opt bits E(32554)
CCDS33682.1 ADM2 gene_id:79924|Hs108|chr22         ( 148) 1056 168.7 1.2e-42


>>CCDS33682.1 ADM2 gene_id:79924|Hs108|chr22              (148 aa)
 initn: 1056 init1: 1056 opt: 1056  Z-score: 879.2  bits: 168.7 E(32554): 1.2e-42
Smith-Waterman score: 1056; 100.0% identity (100.0% similar) in 148 aa overlap (1-148:1-148)

               10        20        30        40        50        60
pF1KB7 MARIPTAALGCISLLCLQLPGSLSRSLGGDPRPVKPREPPARSPSSSLQPRHPAPRPVVW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MARIPTAALGCISLLCLQLPGSLSRSLGGDPRPVKPREPPARSPSSSLQPRHPAPRPVVW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 KLHRALQAQRGAGLAPVMGQPLRDGGRQHSGPRRHSGPRRTQAQLLRVGCVLGTCQVQNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KLHRALQAQRGAGLAPVMGQPLRDGGRQHSGPRRHSGPRRTQAQLLRVGCVLGTCQVQNL
               70        80        90       100       110       120

              130       140        
pF1KB7 SHRLWQLMGPAGRQDSAPVDPSSPHSYG
       ::::::::::::::::::::::::::::
CCDS33 SHRLWQLMGPAGRQDSAPVDPSSPHSYG
              130       140        




148 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:20:44 2016 done: Fri Nov  4 06:20:44 2016
 Total Scan time:  1.980 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]