Result of FASTA (ccds) for
pF1KB7236
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7236, 311 aa
1>>>pF1KB7236 311 - 311 aa - 311 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2520+/-0.000806; mu= 15.5786+/- 0.048
mean_var=63.6702+/-12.615, 0's: 0 Z-trim(106.8): 79 B-trim: 0 in 0/51
Lambda= 0.160733
statistics sampled from 9115 (9197) to 9115 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.283), width: 16
Scan time: 2.490
The best scores are: opt bits E(32554)
CCDS12223.2 RDH8 gene_id:50700|Hs108|chr19 ( 331) 2024 478.0 4.4e-135
CCDS11428.1 HSD17B1 gene_id:3292|Hs108|chr17 ( 328) 748 182.1 5.1e-46
CCDS82126.1 HSD17B1 gene_id:3292|Hs108|chr17 ( 329) 736 179.3 3.5e-45
CCDS82092.1 DHRS7B gene_id:25979|Hs108|chr17 ( 310) 356 91.2 1.1e-18
CCDS11215.1 DHRS7B gene_id:25979|Hs108|chr17 ( 325) 356 91.2 1.2e-18
CCDS3328.1 BDH1 gene_id:622|Hs108|chr3 ( 343) 333 85.9 5e-17
CCDS56020.1 DHRS7C gene_id:201140|Hs108|chr17 ( 312) 324 83.7 1.9e-16
CCDS81810.1 DHRS7 gene_id:51635|Hs108|chr14 ( 289) 322 83.3 2.5e-16
CCDS9743.1 DHRS7 gene_id:51635|Hs108|chr14 ( 339) 322 83.3 2.9e-16
CCDS58517.1 DHRS7C gene_id:201140|Hs108|chr17 ( 311) 317 82.1 6e-16
CCDS31829.1 RDH5 gene_id:5959|Hs108|chr12 ( 318) 299 78.0 1.1e-14
CCDS11982.1 KDSR gene_id:2531|Hs108|chr18 ( 332) 292 76.3 3.5e-14
CCDS8926.1 SDR9C7 gene_id:121214|Hs108|chr12 ( 313) 291 76.1 3.9e-14
CCDS41797.1 RDH16 gene_id:8608|Hs108|chr12 ( 317) 282 74.0 1.7e-13
CCDS2231.1 DHRS9 gene_id:10170|Hs108|chr2 ( 319) 281 73.8 2e-13
CCDS74600.1 DHRS9 gene_id:10170|Hs108|chr2 ( 379) 281 73.8 2.3e-13
CCDS9604.1 DHRS2 gene_id:10202|Hs108|chr14 ( 280) 274 72.1 5.5e-13
CCDS41927.1 DHRS2 gene_id:10202|Hs108|chr14 ( 300) 274 72.1 5.8e-13
CCDS3618.1 HSD17B13 gene_id:345275|Hs108|chr4 ( 300) 267 70.5 1.8e-12
CCDS9605.1 DHRS4 gene_id:10901|Hs108|chr14 ( 278) 261 69.1 4.4e-12
CCDS8925.1 HSD17B6 gene_id:8630|Hs108|chr12 ( 317) 259 68.7 6.8e-12
CCDS10837.1 HSD11B2 gene_id:3291|Hs108|chr16 ( 405) 259 68.7 8.4e-12
CCDS6167.1 SDR16C5 gene_id:195814|Hs108|chr8 ( 309) 255 67.7 1.3e-11
CCDS83296.1 SDR16C5 gene_id:195814|Hs108|chr8 ( 318) 255 67.8 1.3e-11
CCDS3812.1 CBR4 gene_id:84869|Hs108|chr4 ( 237) 249 66.3 2.7e-11
>>CCDS12223.2 RDH8 gene_id:50700|Hs108|chr19 (331 aa)
initn: 2024 init1: 2024 opt: 2024 Z-score: 2538.7 bits: 478.0 E(32554): 4.4e-135
Smith-Waterman score: 2024; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:21-331)
10 20 30 40
pF1KB7 MAAAPRTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMR
::::::::::::::::::::::::::::::::::::::::
CCDS12 MNGQSQVLPGGGHESREGINMAAAPRTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 DLGKKETLEAAAGEALGQTLTVAQLDVCSDESVAQCLSCIQGEVDVLVNNAGMGLVGPLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DLGKKETLEAAAGEALGQTLTVAQLDVCSDESVAQCLSCIQGEVDVLVNNAGMGLVGPLE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 GLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISSVMGLQGVIFNDVYAASKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISSVMGLQGVIFNDVYAASKF
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB7 ALEGFFESLAIQLLQFNIFISLVEPGPVVTEFEGKLLAQVSMAEFPGTDPETLHYFRDLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 ALEGFFESLAIQLLQFNIFISLVEPGPVVTEFEGKLLAQVSMAEFPGTDPETLHYFRDLY
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB7 LPASRKLFCSVGQNPQDVVQAIVNVISSTRPPLRRQTNIRYSPLTTLKTVDSSGSLYVRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LPASRKLFCSVGQNPQDVVQAIVNVISSTRPPLRRQTNIRYSPLTTLKTVDSSGSLYVRT
250 260 270 280 290 300
290 300 310
pF1KB7 THRLLFRCPRLLNLGLQCLSCGCLPTRVRPR
:::::::::::::::::::::::::::::::
CCDS12 THRLLFRCPRLLNLGLQCLSCGCLPTRVRPR
310 320 330
>>CCDS11428.1 HSD17B1 gene_id:3292|Hs108|chr17 (328 aa)
initn: 727 init1: 402 opt: 748 Z-score: 939.6 bits: 182.1 E(32554): 5.1e-46
Smith-Waterman score: 748; 46.9% identity (73.1% similar) in 286 aa overlap (4-286:2-285)
10 20 30 40 50
pF1KB7 MAAAPRTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLGKKETL-EAAAGEALGQ-
: .:::.::::::::.:::.:: ::.. ..: ::.::: . : ::: . :
CCDS11 MARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 TLTVAQLDVCSDESVAQCLSCI-QGEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFG
.: . :::: ...::: . .:.::::: :::.::.::::.:. :. .:.:.: :
CCDS11 SLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 AVRLVKAVLPGMKRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFN
.::...: :: :::: .:...: .:: ::.:. ::::: ::::::::. ::::. :: :.
CCDS11 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 IFISLVEPGPVVTEFEGKLLAQVSMAEFPGTDPETLHYFRDLYLPASRKLFCSVGQNPQD
. .::.: ::: : : :.:.. . . :: .:.: : . :: :...: ..:::..
CCDS11 VHLSLIECGPVHTAFMEKVLGSPEEV-LDRTDIHTFHRFYQ-YLAHSKQVFREAAQNPEE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 VVQAIVNVISSTRPPLRRQTNIRYSPLTTLKTVDSSGSLYVRTTHRLLFRCPRLLNLGLQ
:........ . .: :: :. :. :: .. : ::: :: . :: .:
CCDS11 VAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNYVTAMHREVFGDVPAKAEAGA
240 250 260 270 280 290
300 310
pF1KB7 CLSCGCLPTRVRPR
CCDS11 EAGGGAGPGAEDEAGRGAVGDPELGDPPAAPQ
300 310 320
>>CCDS82126.1 HSD17B1 gene_id:3292|Hs108|chr17 (329 aa)
initn: 695 init1: 364 opt: 736 Z-score: 924.6 bits: 179.3 E(32554): 3.5e-45
Smith-Waterman score: 736; 46.7% identity (72.8% similar) in 287 aa overlap (4-286:2-286)
10 20 30 40 50
pF1KB7 MAAAPRTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLGKKETL-EAAAGEALGQ-
: .:::.::::::::.:::.:: ::.. ..: ::.::: . : ::: . :
CCDS82 MARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 TLTVAQLDVCSDESVAQCLSCI-QGEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFG
.: . :::: ...::: . .:.::::: :::.::.::::.:. :. .:.:.: :
CCDS82 SLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 AVRLVKAVLPGMKRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFN
.::...: :: :::: .:...: .:: ::.:. ::::: ::::::::. ::::. :: :.
CCDS82 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 IF-ISLVEPGPVVTEFEGKLLAQVSMAEFPGTDPETLHYFRDLYLPASRKLFCSVGQNPQ
. .::.: ::: : : :.:.. . . :: .:.: : . :: :...: ..:::.
CCDS82 VHSLSLIECGPVHTAFMEKVLGSPEEV-LDRTDIHTFHRFYQ-YLAHSKQVFREAAQNPE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 DVVQAIVNVISSTRPPLRRQTNIRYSPLTTLKTVDSSGSLYVRTTHRLLFRCPRLLNLGL
.:........ . .: :: :. :. :: .. : ::: :: . :: .:
CCDS82 EVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNYVTAMHREVFGDVPAKAEAG
240 250 260 270 280 290
300 310
pF1KB7 QCLSCGCLPTRVRPR
CCDS82 AEAGGGAGPGAEDEAGRGAVGDPELGDPPAAPQ
300 310 320
>>CCDS82092.1 DHRS7B gene_id:25979|Hs108|chr17 (310 aa)
initn: 315 init1: 315 opt: 356 Z-score: 448.7 bits: 91.2 E(32554): 1.1e-18
Smith-Waterman score: 356; 33.6% identity (64.3% similar) in 244 aa overlap (8-241:40-275)
10 20 30
pF1KB7 MAAAPRTVLISGCSSGIGLELA-VQLAHDPKKRYQVV
:.:.: .::.: : : : : : .:
CCDS82 LPLLFGCLGVFGLFRLLQWVRGKAYLRNAVVVITGATSGLGKECAKVFYAAGAK----LV
10 20 30 40 50 60
40 50 60 70 80
pF1KB7 ATMRDLGKKETL--EAAAGEALG-QTLT--VAQLDVCSDESV----AQCLSCIQGEVDVL
:. : : : : .:..: :: .. .:. .. .. :. :.:. : ::.:
CCDS82 LCGRNGGALEELIRELTASHATKVQTHKPYLVTFDLTDSGAIVAAAAEILQCF-GYVDIL
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB7 VNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISSVMGLQ
:::::.. : . .. . . :..::.:: : :.::.::.: .:::::::.:::..: .
CCDS82 VNNAGISYRGTIMDTTVDVDKRVMETNYFGPVALTKALLPSMIKRRQGHIVAISSIQGKM
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB7 GVIFNDVYAASKFALEGFFESLAIQLLQFNIFISLVEPGPVVTEFEGKLLAQVSMAEFPG
.. : ..::::: : ..::. : .. :..: .... :: . :.. .. : .. . :
CCDS82 SIPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNL--SVNAITADGSRYG
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB7 TDPETLHYFRDLYLPASRKLFCSVGQNPQDVVQAIVNVISSTRPPLRRQTNIRYSPLTTL
. : :. . ... .. .::.. .::. :
CCDS82 VMDTTTAQGRS-PVEVAQDVLAAVGKKKKDVILADLLPSLAVYLRTLAPGLFFSLMASRA
250 260 270 280 290 300
270 280 290 300 310
pF1KB7 KTVDSSGSLYVRTTHRLLFRCPRLLNLGLQCLSCGCLPTRVRPR
CCDS82 RKERKSKNS
310
>>CCDS11215.1 DHRS7B gene_id:25979|Hs108|chr17 (325 aa)
initn: 315 init1: 315 opt: 356 Z-score: 448.4 bits: 91.2 E(32554): 1.2e-18
Smith-Waterman score: 356; 33.6% identity (64.3% similar) in 244 aa overlap (8-241:55-290)
10 20 30
pF1KB7 MAAAPRTVLISGCSSGIGLELA-VQLAHDPKKRYQVV
:.:.: .::.: : : : : : .:
CCDS11 LPLLFGCLGVFGLFRLLQWVRGKAYLRNAVVVITGATSGLGKECAKVFYAAGAK----LV
30 40 50 60 70 80
40 50 60 70 80
pF1KB7 ATMRDLGKKETL--EAAAGEALG-QTLT--VAQLDVCSDESV----AQCLSCIQGEVDVL
:. : : : : .:..: :: .. .:. .. .. :. :.:. : ::.:
CCDS11 LCGRNGGALEELIRELTASHATKVQTHKPYLVTFDLTDSGAIVAAAAEILQCF-GYVDIL
90 100 110 120 130
90 100 110 120 130 140
pF1KB7 VNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISSVMGLQ
:::::.. : . .. . . :..::.:: : :.::.::.: .:::::::.:::..: .
CCDS11 VNNAGISYRGTIMDTTVDVDKRVMETNYFGPVALTKALLPSMIKRRQGHIVAISSIQGKM
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB7 GVIFNDVYAASKFALEGFFESLAIQLLQFNIFISLVEPGPVVTEFEGKLLAQVSMAEFPG
.. : ..::::: : ..::. : .. :..: .... :: . :.. .. : .. . :
CCDS11 SIPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNL--SVNAITADGSRYG
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB7 TDPETLHYFRDLYLPASRKLFCSVGQNPQDVVQAIVNVISSTRPPLRRQTNIRYSPLTTL
. : :. . ... .. .::.. .::. :
CCDS11 VMDTTTAQGRS-PVEVAQDVLAAVGKKKKDVILADLLPSLAVYLRTLAPGLFFSLMASRA
260 270 280 290 300 310
270 280 290 300 310
pF1KB7 KTVDSSGSLYVRTTHRLLFRCPRLLNLGLQCLSCGCLPTRVRPR
CCDS11 RKERKSKNS
320
>>CCDS3328.1 BDH1 gene_id:622|Hs108|chr3 (343 aa)
initn: 216 init1: 123 opt: 333 Z-score: 419.2 bits: 85.9 E(32554): 5e-17
Smith-Waterman score: 334; 28.1% identity (59.6% similar) in 302 aa overlap (2-279:49-343)
10 20
pF1KB7 MAAAP---RTVLISGCSSGIGLELAVQLAHD
:: : ..::..::.::.:. :: :
CCDS33 SACDRENGARRPLLLGSTSFIPIGRRTYASAAEPVGSKAVLVTGCDSGFGFSLA---KHL
20 30 40 50 60 70
30 40 50 60 70 80
pF1KB7 PKKRYQVVA--TMRDLGKKETLEAAAGEALGQTLTVAQLDVCSDESVAQCLSCIQGEVDV
.: . : : :.: :. . : . .. . : ..::.:::.: : . . ... .
CCDS33 HSKGFLVFAGCLMKDKGHDGVKELDSLNS--DRLRTVQLNVCSSEEVEKVVEIVRSSLKD
80 90 100 110 120 130
90 100 110 120 130
pF1KB7 -------LVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVV
::::::.. : .: :: ....: ..:..:.::..:. :: . :: .:..:
CCDS33 PEKGMWGLVNNAGISTFGEVEFTSLETYKQVAEVNLWGTVRMTKSFLP-LIRRAKGRVVN
140 150 160 170 180 190
140 150 160 170 180 190
pF1KB7 ISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFNIFISLVEPGPVV--TEFEGKLL
:::..: .. . : .::..:.: . : .. ... .:.:::: . : . .
CCDS33 ISSMLGRMANPARSPYCITKFGVEAFSDCLRYEMYPLGVKVSVVEPGNFIAATSLYSPES
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB7 AQVSMAEFPGTDPETLH--YFRDLYLPASRKL--FCSVGQ-NPQDVVQAIVNVISSTRP-
:. .. ::... : . . :. .:: :. . . :..:.......: :
CCDS33 IQAIAKKMWEELPEVVRKDYGKKYFDEKIAKMETYCSSGSTDTSPVIDAVTHALTATTPY
260 270 280 290 300 310
260 270 280 290 300
pF1KB7 ----PLRRQTNIRYSPLTTLKTVDSSGSLYVRTTHRLLFRCPRLLNLGLQCLSCGCLPTR
:. .:.. .: : . : .:.:
CCDS33 TRYHPMDYYWWLRMQIMTHLPGA-ISDMIYIR
320 330 340
310
pF1KB7 VRPR
>>CCDS56020.1 DHRS7C gene_id:201140|Hs108|chr17 (312 aa)
initn: 292 init1: 292 opt: 324 Z-score: 408.6 bits: 83.7 E(32554): 1.9e-16
Smith-Waterman score: 324; 33.7% identity (63.2% similar) in 193 aa overlap (2-185:34-222)
10 20 30
pF1KB7 MAAAPRTVLISGCSSGIGLELAVQLAHDPKK
:. ..:.:. ::.: : : .. :
CCDS56 MAMLMLPLLLLGISGLLFIYQEVSRLWSKSAVQNKVVVITDAISGLGKECA-RVFHTGGA
10 20 30 40 50 60
40 50 60 70 80
pF1KB7 RYQVVATMRDLGKKETLEAA---AGEALGQTLT--VAQLDV----CSDESVAQCLSCIQG
: .: .. . :.: : ... ::.: .. ::. : . . . :.: :
CCDS56 R--LVLCGKNWERLENLYDALISVADPSKQTFTPKLVLLDLSDISCVPDVAKEVLDCY-G
70 80 90 100 110
90 100 110 120 130 140
pF1KB7 EVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISS
::.:.:::.. . :: . .:: ....:.:.:: . :.::.::.: :: :.::....
CCDS56 CVDILINNASVKVKGPAHKISLELDKKIMDANYFGPITLTKALLPNMISRRTGQIVLVNN
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB7 VMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFNIFISLVEPGPVVTEFEGKLLAQVSM
..: :. : .::::: : :::. : .. .... :: : :
CCDS56 IQGKFGIPFRTTYAASKHAALGFFDCLRAEVEEYDVVISTVSPTFIRSYHVYPEQGNWEA
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB7 AEFPGTDPETLHYFRDLYLPASRKLFCSVGQNPQDVVQAIVNVISSTRPPLRRQTNIRYS
CCDS56 SIWKFFFRKLTYGVHPVEVAEEVMRTVRRKKQEVFMANPIPKAAVYVRTFFPEFFFAVVA
240 250 260 270 280 290
>>CCDS81810.1 DHRS7 gene_id:51635|Hs108|chr14 (289 aa)
initn: 319 init1: 212 opt: 322 Z-score: 406.6 bits: 83.3 E(32554): 2.5e-16
Smith-Waterman score: 322; 34.2% identity (66.3% similar) in 202 aa overlap (8-201:3-201)
10 20 30 40 50
pF1KB7 MAAAPRTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLGKKETLEA---AAGEALG
: ..: ::::: ::: ::. : ..: . : . . : .. :.
CCDS81 MVVWVTGASSGIGEELAYQLS---KLGVSLVLSARRVHELERVKRRCLENGNLKE
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 QTLTVAQLDVC---SDESVAQCLSCIQGEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTN
. . : ::. : :.... . :..:.::::.::. . :: ....... :
CCDS81 KDILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 FFGAVRLVKAVLPGMKRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLL
..:.: :.: ::: : .:.::.::...:..:. .: .. : ::: ::.:::..: .:
CCDS81 YLGTVSLTKCVLPHMIERKQGKIVTVNSILGIISVPLSIGYCASKHALRGFFNGLRTELA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 QF-NIFISLVEPGPVVTEF-EGKLLAQVSMAEFPGTDPETLHYFRDLYLPASRKLFCSVG
. .:..: . :::: ... :..: ..:.
CCDS81 TYPGIIVSNICPGPVQSNIVENSLAGEVTKTIGNNGDQSHKMTTSRCVRLMLISMANDLK
180 190 200 210 220 230
>>CCDS9743.1 DHRS7 gene_id:51635|Hs108|chr14 (339 aa)
initn: 319 init1: 212 opt: 322 Z-score: 405.5 bits: 83.3 E(32554): 2.9e-16
Smith-Waterman score: 322; 34.2% identity (66.3% similar) in 202 aa overlap (8-201:53-251)
10 20 30
pF1KB7 MAAAPRTVLISGCSSGIGLELAVQLAHDPKKRYQVVA
: ..: ::::: ::: ::. : ..:
CCDS97 LRFLRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAYQLS---KLGVSLVL
30 40 50 60 70
40 50 60 70 80 90
pF1KB7 TMRDLGKKETLEA---AAGEALGQTLTVAQLDVC---SDESVAQCLSCIQGEVDVLVNNA
. : . . : .. :. . . : ::. : :.... . :..:.::::.
CCDS97 SARRVHELERVKRRCLENGNLKEKDILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNG
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB7 GMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISSVMGLQGVIF
::. . :: ....... :..:.: :.: ::: : .:.::.::...:..:. .: .
CCDS97 GMSQRSLCMDTSLDVYRKLIELNYLGTVSLTKCVLPHMIERKQGKIVTVNSILGIISVPL
140 150 160 170 180 190
160 170 180 190 200
pF1KB7 NDVYAASKFALEGFFESLAIQLLQF-NIFISLVEPGPVVTEF-EGKLLAQVSMAEFPGTD
. : ::: ::.:::..: .: . .:..: . :::: ... :..: ..:.
CCDS97 SIGYCASKHALRGFFNGLRTELATYPGIIVSNICPGPVQSNIVENSLAGEVTKTIGNNGD
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB7 PETLHYFRDLYLPASRKLFCSVGQNPQDVVQAIVNVISSTRPPLRRQTNIRYSPLTTLKT
CCDS97 QSHKMTTSRCVRLMLISMANDLKEVWISEQPFLLVTYLWQYMPTWAWWITNKMGKKRIEN
260 270 280 290 300 310
>>CCDS58517.1 DHRS7C gene_id:201140|Hs108|chr17 (311 aa)
initn: 292 init1: 292 opt: 317 Z-score: 399.8 bits: 82.1 E(32554): 6e-16
Smith-Waterman score: 317; 33.3% identity (61.5% similar) in 192 aa overlap (2-185:34-221)
10 20 30
pF1KB7 MAAAPRTVLISGCSSGIGLELAVQLAHDPKK
:. ..:.:. ::.: : : .. :
CCDS58 MAMLMLPLLLLGISGLLFIYQEVSRLWSKSAVQNKVVVITDAISGLGKECA-RVFHTGGA
10 20 30 40 50 60
40 50 60 70 80
pF1KB7 RYQVVATMRDLGKKETLEAA----AGEALGQTLTVAQLDV----CSDESVAQCLSCIQGE
: .: .. . :.: : : . : .. ::. : . . . :.: :
CCDS58 R--LVLCGKNWERLENLYDALISVADPSKTFTPKLVLLDLSDISCVPDVAKEVLDCY-GC
70 80 90 100 110
90 100 110 120 130 140
pF1KB7 VDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISSV
::.:.:::.. . :: . .:: ....:.:.:: . :.::.::.: :: :.::.....
CCDS58 VDILINNASVKVKGPAHKISLELDKKIMDANYFGPITLTKALLPNMISRRTGQIVLVNNI
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB7 MGLQGVIFNDVYAASKFALEGFFESLAIQLLQFNIFISLVEPGPVVTEFEGKLLAQVSMA
.: :. : .::::: : :::. : .. .... :: : :
CCDS58 QGKFGIPFRTTYAASKHAALGFFDCLRAEVEEYDVVISTVSPTFIRSYHVYPEQGNWEAS
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB7 EFPGTDPETLHYFRDLYLPASRKLFCSVGQNPQDVVQAIVNVISSTRPPLRRQTNIRYSP
CCDS58 IWKFFFRKLTYGVHPVEVAEEVMRTVRRKKQEVFMANPIPKAAVYVRTFFPEFFFAVVAC
240 250 260 270 280 290
311 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 06:11:11 2016 done: Fri Nov 4 06:11:11 2016
Total Scan time: 2.490 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]