FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7224, 356 aa
  1>>>pF1KB7224 356 - 356 aa - 356 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.9741+/-0.000791; mu= 6.1819+/- 0.048
 mean_var=186.6363+/-38.066, 0's: 0 Z-trim(115.6): 1  B-trim: 406 in 1/53
 Lambda= 0.093881
 statistics sampled from 16127 (16128) to 16127 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.807), E-opt: 0.2 (0.495), width:  16
 Scan time:  3.280

The best scores are:                                      opt bits E(32554)
CCDS61789.1 C16orf91 gene_id:283951|Hs108|chr16    ( 132)  701 106.2 1.6e-23


>>CCDS61789.1 C16orf91 gene_id:283951|Hs108|chr16         (132 aa)
 initn: 700 init1: 700 opt: 701  Z-score: 535.6  bits: 106.2 E(32554): 1.6e-23
Smith-Waterman score: 701; 95.1% identity (97.1% similar) in 102 aa overlap (169-270:12-113)

      140       150       160       170       180       190        
pF1KB7 PPQPHFEPPPPTTVGAPRSLQGDWFGSDSRAVRALRLIGWASRSLHPLPGSRDRAHPAAE
                                     ::::::::::::::::::::::::::::::
CCDS61                    MNRVLCAPAAGAVRALRLIGWASRSLHPLPGSRDRAHPAAE
                                  10        20        30        40 

      200       210       220       230       240       250        
pF1KB7 EEDDPDRPIEFSSSKANPHRWSVGHTMGKGHQRPWWKVLPLSCFLVALIIWCYLREESEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 EEDDPDRPIEFSSSKANPHRWSVGHTMGKGHQRPWWKVLPLSCFLVALIIWCYLREESEA
              50        60        70        80        90       100 

      260       270       280       290       300       310        
pF1KB7 DQWLRQEGSRQPPFGFDVTFARDCPGYACVLSTEGLGWWMGHLAMLIRVKAEQNLSRSET
       ::::::  .. :                                                
CCDS61 DQWLRQVWGEVPEPSDRSEEPETPAAYRART                             
             110       120       130                               




356 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 20:23:09 2016 done: Fri Nov  4 20:23:09 2016
 Total Scan time:  3.280 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]