Result of FASTA (omim) for
pF1KB7215
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7215, 111 aa
1>>>pF1KB7215 111 - 111 aa - 111 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9202+/-0.000254; mu= 12.8157+/- 0.016
mean_var=68.0620+/-13.114, 0's: 0 Z-trim(122.1): 30 B-trim: 0 in 0/53
Lambda= 0.155461
statistics sampled from 39690 (39724) to 39690 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.83), E-opt: 0.2 (0.466), width: 16
Scan time: 4.920
The best scores are: opt bits E(85289)
NP_543145 (OMIM: 609872) WAP four-disulfide core d ( 111) 804 187.8 3.1e-48
NP_003055 (OMIM: 107285) antileukoproteinase precu ( 132) 207 53.9 7.2e-08
XP_011526903 (OMIM: 605161) PREDICTED: WAP four-di ( 123) 187 49.4 1.5e-06
XP_011526904 (OMIM: 605161) PREDICTED: WAP four-di ( 123) 187 49.4 1.5e-06
NP_663627 (OMIM: 605161) WAP four-disulfide core d ( 123) 187 49.4 1.5e-06
NP_002629 (OMIM: 182257) elafin preproprotein [Hom ( 117) 166 44.7 3.9e-05
NP_001289790 (OMIM: 609031) eppin isoform 2 precur ( 127) 149 40.9 0.00058
NP_065131 (OMIM: 609031) eppin isoform 1 precursor ( 133) 149 40.9 0.0006
>>NP_543145 (OMIM: 609872) WAP four-disulfide core domai (111 aa)
initn: 804 init1: 804 opt: 804 Z-score: 986.9 bits: 187.8 E(85289): 3.1e-48
Smith-Waterman score: 804; 100.0% identity (100.0% similar) in 111 aa overlap (1-111:1-111)
10 20 30 40 50 60
pF1KB7 MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_543 MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERK
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 CCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_543 CCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK
70 80 90 100 110
>>NP_003055 (OMIM: 107285) antileukoproteinase precursor (132 aa)
initn: 178 init1: 163 opt: 207 Z-score: 262.2 bits: 53.9 E(85289): 7.2e-08
Smith-Waterman score: 207; 41.6% identity (72.7% similar) in 77 aa overlap (1-74:1-76)
10 20 30 40 50
pF1KB7 MGSSSFLVLMVSLVLVTLV--AVEGVKEGIEKAGVCPAD-NVRCFKSDPPQCHTDQDCLG
: ::... ..: :.: ::. :::: ... :::::: ...:.. :.:..: .: :
NP_003 MKSSGLFPFLVLLALGTLAPWAVEGSGKSF-KAGVCPPKKSAQCLRYKKPECQSDWQCPG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 ERKCCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK
...:: ::.::. ::
NP_003 KKRCCPDTCGIKCLDPVDTPNPTRRKPGKCPVTYGQCLMLNPPNFCEMDGQCKRDLKCCM
60 70 80 90 100 110
>--
initn: 124 init1: 80 opt: 150 Z-score: 193.1 bits: 41.2 E(85289): 0.00051
Smith-Waterman score: 150; 42.6% identity (63.8% similar) in 47 aa overlap (30-75:85-131)
10 20 30 40 50
pF1KB7 MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQ-CHTDQDCLGE
: : ::. .:. .::. :. : .: .
NP_003 WQCPGKKRCCPDTCGIKCLDPVDTPNPTRRKPGKCPVTYGQCLMLNPPNFCEMDGQCKRD
60 70 80 90 100 110
60 70 80 90 100 110
pF1KB7 RKCCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK
:::. :: .:: :::
NP_003 LKCCMGMCGKSCVSPVKA
120 130
>>XP_011526903 (OMIM: 605161) PREDICTED: WAP four-disulf (123 aa)
initn: 169 init1: 158 opt: 187 Z-score: 238.4 bits: 49.4 E(85289): 1.5e-06
Smith-Waterman score: 187; 34.8% identity (58.0% similar) in 112 aa overlap (1-108:1-108)
10 20 30 40 50
pF1KB7 MGSSSFLVLMVSLVLVT-LVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGER
: ..:.:.: . :.. . : :: : :.: ::.: :: :. :. : : :: :..: :
XP_011 MRTQSLLLLGALLAVGSQLPAVFGRKKG-EKSGGCPPDDGPCLLSVPDQCVEDSQCPLTR
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 KCCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGW---EAKCPGSSSTRCPQK
:::: : .:: : .. :. .... : .. : :.. ::
XP_011 KCCYRACFRQCV-PRVSVKLGSCPEDQLRCLSPMNHLCHKDSDCSGKK--RCCHSACGRD
60 70 80 90 100 110
XP_011 CRDPARG
120
>>XP_011526904 (OMIM: 605161) PREDICTED: WAP four-disulf (123 aa)
initn: 169 init1: 158 opt: 187 Z-score: 238.4 bits: 49.4 E(85289): 1.5e-06
Smith-Waterman score: 187; 34.8% identity (58.0% similar) in 112 aa overlap (1-108:1-108)
10 20 30 40 50
pF1KB7 MGSSSFLVLMVSLVLVT-LVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGER
: ..:.:.: . :.. . : :: : :.: ::.: :: :. :. : : :: :..: :
XP_011 MRTQSLLLLGALLAVGSQLPAVFGRKKG-EKSGGCPPDDGPCLLSVPDQCVEDSQCPLTR
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 KCCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGW---EAKCPGSSSTRCPQK
:::: : .:: : .. :. .... : .. : :.. ::
XP_011 KCCYRACFRQCV-PRVSVKLGSCPEDQLRCLSPMNHLCHKDSDCSGKK--RCCHSACGRD
60 70 80 90 100 110
XP_011 CRDPARG
120
>>NP_663627 (OMIM: 605161) WAP four-disulfide core domai (123 aa)
initn: 169 init1: 158 opt: 187 Z-score: 238.4 bits: 49.4 E(85289): 1.5e-06
Smith-Waterman score: 187; 34.8% identity (58.0% similar) in 112 aa overlap (1-108:1-108)
10 20 30 40 50
pF1KB7 MGSSSFLVLMVSLVLVT-LVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGER
: ..:.:.: . :.. . : :: : :.: ::.: :: :. :. : : :: :..: :
NP_663 MRTQSLLLLGALLAVGSQLPAVFGRKKG-EKSGGCPPDDGPCLLSVPDQCVEDSQCPLTR
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 KCCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGW---EAKCPGSSSTRCPQK
:::: : .:: : .. :. .... : .. : :.. ::
NP_663 KCCYRACFRQCV-PRVSVKLGSCPEDQLRCLSPMNHLCHKDSDCSGKK--RCCHSACGRD
60 70 80 90 100 110
NP_663 CRDPARG
120
>>NP_002629 (OMIM: 182257) elafin preproprotein [Homo sa (117 aa)
initn: 184 init1: 95 opt: 166 Z-score: 213.2 bits: 44.7 E(85289): 3.9e-05
Smith-Waterman score: 166; 42.9% identity (55.4% similar) in 56 aa overlap (20-73:61-116)
10 20 30 40
pF1KB7 MGSSSFLVLMVSLVLVTLVAVEGVKEGIE-KAGVCPADNVRCFKSDPP-
: : :: . : : :: .:: .::
NP_002 GQDTVKGRVPFNGQDPVKGQVSVKGQDKVKAQEPVKGPVSTKPGSCPIILIRCAMLNPPN
40 50 60 70 80 90
50 60 70 80 90 100
pF1KB7 QCHTDQDCLGERKCCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTR
.: : :: : .::: ::. : .:
NP_002 RCLKDTDCPGIKKCCEGSCGMACFVPQ
100 110
>>NP_001289790 (OMIM: 609031) eppin isoform 2 precursor (127 aa)
initn: 195 init1: 115 opt: 149 Z-score: 192.1 bits: 40.9 E(85289): 0.00058
Smith-Waterman score: 149; 33.8% identity (59.2% similar) in 71 aa overlap (1-71:1-70)
10 20 30 40 50 60
pF1KB7 MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERK
::::..: :.: .::.. : :. . . :: .: .. : :..: ..:
NP_001 MGSSGLLSLLVLFVLLANVQGPGLTDWLFPRR-CPKIREECEFQERDVCTKDRQCQDNKK
10 20 30 40 50
70 80 90 100 110
pF1KB7 CCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK
:: . :: ::.
NP_001 CCVFSCGKKCLDLKQVSLQMYAKCQKKLAPAWLIFFIGGMTRKIILAPCLSMVAARETIT
60 70 80 90 100 110
>>NP_065131 (OMIM: 609031) eppin isoform 1 precursor [Ho (133 aa)
initn: 185 init1: 115 opt: 149 Z-score: 191.9 bits: 40.9 E(85289): 0.0006
Smith-Waterman score: 149; 33.8% identity (59.2% similar) in 71 aa overlap (1-71:1-70)
10 20 30 40 50 60
pF1KB7 MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERK
::::..: :.: .::.. : :. . . :: .: .. : :..: ..:
NP_065 MGSSGLLSLLVLFVLLANVQGPGLTDWLFPRR-CPKIREECEFQERDVCTKDRQCQDNKK
10 20 30 40 50
70 80 90 100 110
pF1KB7 CCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK
:: . :: ::.
NP_065 CCVFSCGKKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQS
60 70 80 90 100 110
111 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 06:01:48 2016 done: Fri Nov 4 06:01:48 2016
Total Scan time: 4.920 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]