Result of FASTA (omim) for
pF1KB7213
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7213, 142 aa
1>>>pF1KB7213 142 - 142 aa - 142 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6947+/-0.000322; mu= 14.8591+/- 0.020
mean_var=70.6638+/-13.913, 0's: 0 Z-trim(117.1): 37 B-trim: 114 in 1/51
Lambda= 0.152572
statistics sampled from 28728 (28767) to 28728 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.337), width: 16
Scan time: 4.160
The best scores are: opt bits E(85289)
NP_001155201 (OMIM: 172411) phospholipase A2, memb ( 144) 487 115.5 2.9e-26
NP_001155199 (OMIM: 172411) phospholipase A2, memb ( 144) 487 115.5 2.9e-26
NP_001155200 (OMIM: 172411) phospholipase A2, memb ( 144) 487 115.5 2.9e-26
NP_000291 (OMIM: 172411) phospholipase A2, membran ( 144) 487 115.5 2.9e-26
XP_011539893 (OMIM: 228980,601192) PREDICTED: calc ( 138) 428 102.5 2.3e-22
XP_011539894 (OMIM: 228980,601192) PREDICTED: calc ( 138) 428 102.5 2.3e-22
XP_011539891 (OMIM: 228980,601192) PREDICTED: calc ( 138) 428 102.5 2.3e-22
NP_000920 (OMIM: 228980,601192) calcium-dependent ( 138) 428 102.5 2.3e-22
XP_011539889 (OMIM: 228980,601192) PREDICTED: calc ( 138) 428 102.5 2.3e-22
XP_011539892 (OMIM: 228980,601192) PREDICTED: calc ( 138) 428 102.5 2.3e-22
XP_011539890 (OMIM: 228980,601192) PREDICTED: calc ( 138) 428 102.5 2.3e-22
XP_005245950 (OMIM: 228980,601192) PREDICTED: calc ( 138) 428 102.5 2.3e-22
XP_005245949 (OMIM: 228980,601192) PREDICTED: calc ( 169) 428 102.6 2.7e-22
XP_005245948 (OMIM: 228980,601192) PREDICTED: calc ( 169) 428 102.6 2.7e-22
XP_011539888 (OMIM: 228980,601192) PREDICTED: calc ( 169) 428 102.6 2.7e-22
NP_036532 (OMIM: 605630) group IID secretory phosp ( 145) 427 102.3 2.8e-22
NP_073730 (OMIM: 616793) group IIF secretory phosp ( 211) 422 101.4 7.9e-22
XP_011540258 (OMIM: 616793) PREDICTED: group IIF s ( 211) 422 101.4 7.9e-22
NP_003552 (OMIM: 603603) group 10 secretory phosph ( 165) 397 95.8 3e-20
NP_000919 (OMIM: 172410) phospholipase A2 precurso ( 148) 308 76.1 2.2e-14
XP_011540257 (OMIM: 616793) PREDICTED: group IIF s ( 219) 296 73.6 1.8e-13
XP_011521000 (OMIM: 603603) PREDICTED: group 10 se ( 120) 276 69.0 2.5e-12
XP_011520999 (OMIM: 603603) PREDICTED: group 10 se ( 124) 276 69.0 2.5e-12
XP_011520998 (OMIM: 603603) PREDICTED: group 10 se ( 131) 276 69.0 2.6e-12
XP_011520997 (OMIM: 603603) PREDICTED: group 10 se ( 133) 276 69.0 2.7e-12
NP_001073868 (OMIM: 601658) otoconin-90 precursor ( 477) 277 69.8 5.7e-12
NP_001258743 (OMIM: 605630) group IID secretory ph ( 62) 147 40.3 0.00054
>>NP_001155201 (OMIM: 172411) phospholipase A2, membrane (144 aa)
initn: 500 init1: 440 opt: 487 Z-score: 592.4 bits: 115.5 E(85289): 2.9e-26
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (6-142:9-144)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
:.... :: : ::::.: ::. ::: .::.:. :::.::.:: : :
NP_001 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
:: :: .::::: :::: :: :. .: :: : : :: . .:. ::::: :: ::
NP_001 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
60 70 80 90 100 110
120 130 140
pF1KB7 RRNLGTYNRKYAHYPNKLCTGPTPPC
:: :::.:: .: :: : : :: :
NP_001 ARNKTTYNKKYQYYSNKHCRGSTPRC
120 130 140
>>NP_001155199 (OMIM: 172411) phospholipase A2, membrane (144 aa)
initn: 500 init1: 440 opt: 487 Z-score: 592.4 bits: 115.5 E(85289): 2.9e-26
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (6-142:9-144)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
:.... :: : ::::.: ::. ::: .::.:. :::.::.:: : :
NP_001 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
:: :: .::::: :::: :: :. .: :: : : :: . .:. ::::: :: ::
NP_001 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
60 70 80 90 100 110
120 130 140
pF1KB7 RRNLGTYNRKYAHYPNKLCTGPTPPC
:: :::.:: .: :: : : :: :
NP_001 ARNKTTYNKKYQYYSNKHCRGSTPRC
120 130 140
>>NP_001155200 (OMIM: 172411) phospholipase A2, membrane (144 aa)
initn: 500 init1: 440 opt: 487 Z-score: 592.4 bits: 115.5 E(85289): 2.9e-26
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (6-142:9-144)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
:.... :: : ::::.: ::. ::: .::.:. :::.::.:: : :
NP_001 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
:: :: .::::: :::: :: :. .: :: : : :: . .:. ::::: :: ::
NP_001 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
60 70 80 90 100 110
120 130 140
pF1KB7 RRNLGTYNRKYAHYPNKLCTGPTPPC
:: :::.:: .: :: : : :: :
NP_001 ARNKTTYNKKYQYYSNKHCRGSTPRC
120 130 140
>>NP_000291 (OMIM: 172411) phospholipase A2, membrane as (144 aa)
initn: 500 init1: 440 opt: 487 Z-score: 592.4 bits: 115.5 E(85289): 2.9e-26
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (6-142:9-144)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
:.... :: : ::::.: ::. ::: .::.:. :::.::.:: : :
NP_000 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
:: :: .::::: :::: :: :. .: :: : : :: . .:. ::::: :: ::
NP_000 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
60 70 80 90 100 110
120 130 140
pF1KB7 RRNLGTYNRKYAHYPNKLCTGPTPPC
:: :::.:: .: :: : : :: :
NP_000 ARNKTTYNKKYQYYSNKHCRGSTPRC
120 130 140
>>XP_011539893 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 445 init1: 358 opt: 428 Z-score: 522.4 bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
:: : : :.:... ::::.:::.:: .:. :::::: :: : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
:::: ::: ::::::. ::. . ..: . . . : :. : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
120 130 140
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
:: .:: .: ..:: ::.
XP_011 NLRSYNPQYQYFPNILCS
130
>>XP_011539894 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 445 init1: 358 opt: 428 Z-score: 522.4 bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
:: : : :.:... ::::.:::.:: .:. :::::: :: : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
:::: ::: ::::::. ::. . ..: . . . : :. : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
120 130 140
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
:: .:: .: ..:: ::.
XP_011 NLRSYNPQYQYFPNILCS
130
>>XP_011539891 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 445 init1: 358 opt: 428 Z-score: 522.4 bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
:: : : :.:... ::::.:::.:: .:. :::::: :: : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
:::: ::: ::::::. ::. . ..: . . . : :. : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
120 130 140
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
:: .:: .: ..:: ::.
XP_011 NLRSYNPQYQYFPNILCS
130
>>NP_000920 (OMIM: 228980,601192) calcium-dependent phos (138 aa)
initn: 445 init1: 358 opt: 428 Z-score: 522.4 bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
:: : : :.:... ::::.:::.:: .:. :::::: :: : : :
NP_000 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
:::: ::: ::::::. ::. . ..: . . . : :. : ::.. . :..:
NP_000 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
120 130 140
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
:: .:: .: ..:: ::.
NP_000 NLRSYNPQYQYFPNILCS
130
>>XP_011539889 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 445 init1: 358 opt: 428 Z-score: 522.4 bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
:: : : :.:... ::::.:::.:: .:. :::::: :: : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
:::: ::: ::::::. ::. . ..: . . . : :. : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
120 130 140
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
:: .:: .: ..:: ::.
XP_011 NLRSYNPQYQYFPNILCS
130
>>XP_011539892 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 445 init1: 358 opt: 428 Z-score: 522.4 bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)
10 20 30 40 50
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
:: : : :.:... ::::.:::.:: .:. :::::: :: : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
:::: ::: ::::::. ::. . ..: . . . : :. : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
120 130 140
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
:: .:: .: ..:: ::.
XP_011 NLRSYNPQYQYFPNILCS
130
142 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 06:01:16 2016 done: Fri Nov 4 06:01:17 2016
Total Scan time: 4.160 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]