Result of FASTA (ccds) for
pF1KB7206
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7206, 575 aa
1>>>pF1KB7206 575 - 575 aa - 575 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3924+/-0.00104; mu= 9.4408+/- 0.062
mean_var=143.7980+/-30.058, 0's: 0 Z-trim(108.4): 46 B-trim: 90 in 1/49
Lambda= 0.106954
statistics sampled from 10152 (10181) to 10152 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.313), width: 16
Scan time: 3.300
The best scores are: opt bits E(32554)
CCDS13213.2 BPIFB4 gene_id:149954|Hs108|chr20 ( 614) 3733 588.2 1e-167
CCDS13212.1 BPIFB3 gene_id:359710|Hs108|chr20 ( 476) 843 142.2 1.4e-33
CCDS13211.1 BPIFB6 gene_id:128859|Hs108|chr20 ( 453) 742 126.6 6.8e-29
CCDS13210.1 BPIFB2 gene_id:80341|Hs108|chr20 ( 458) 477 85.7 1.4e-16
CCDS13906.1 BPIFC gene_id:254240|Hs108|chr22 ( 507) 367 68.7 1.9e-11
>>CCDS13213.2 BPIFB4 gene_id:149954|Hs108|chr20 (614 aa)
initn: 3733 init1: 3733 opt: 3733 Z-score: 3124.6 bits: 588.2 E(32554): 1e-167
Smith-Waterman score: 3733; 100.0% identity (100.0% similar) in 575 aa overlap (1-575:40-614)
10 20 30
pF1KB7 MLQQSDALHSALREVPLGVGDIPYNDFHVR
::::::::::::::::::::::::::::::
CCDS13 LSVVAVCGTSHETNTVLRVTKDVLSNAISGMLQQSDALHSALREVPLGVGDIPYNDFHVR
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 GPPPVYTNGKKLDGIYQYGHIETNDNTAQLGGKYRYGEILESEGSIRDLRNSGYRSAENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GPPPVYTNGKKLDGIYQYGHIETNDNTAQLGGKYRYGEILESEGSIRDLRNSGYRSAENA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 YGGHRGLGRYRAAPVGRLHRRELQPGEIPPGVATGAVGPGGLLGTGGMLAADGILAGQGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YGGHRGLGRYRAAPVGRLHRRELQPGEIPPGVATGAVGPGGLLGTGGMLAADGILAGQGG
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 LLGGGGLLGDGGLLGGGGVLGVLGEGGILSTVQGITGLRIVELTLPRVSVRLLPGVGVYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LLGGGGLLGDGGLLGGGGVLGVLGEGGILSTVQGITGLRIVELTLPRVSVRLLPGVGVYL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 SLYTRVAINGKSLIGFLDIAVEVNITAKVRLTMDRTGYPRLVIERCDTLLGGIKVKLLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SLYTRVAINGKSLIGFLDIAVEVNITAKVRLTMDRTGYPRLVIERCDTLLGGIKVKLLRG
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 LLPNLVDNLVNRVLADVLPDLLCPIVDVVLGLVNDQLGLVDSLIPLGILGSVQYTFSSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LLPNLVDNLVNRVLADVLPDLLCPIVDVVLGLVNDQLGLVDSLIPLGILGSVQYTFSSLP
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 LVTGEFLELDLNTLVGEAGGGLIDYPLGWPAVSPKPMPELPPMGDNTKSQLAMSANFLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LVTGEFLELDLNTLVGEAGGGLIDYPLGWPAVSPKPMPELPPMGDNTKSQLAMSANFLGS
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 VLTLLQKQHALDLDITNGMFEELPPLTTATLGALIPKVFQQYPESCPLIIRIQVLNPPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VLTLLQKQHALDLDITNGMFEELPPLTTATLGALIPKVFQQYPESCPLIIRIQVLNPPSV
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB7 MLQKDKALVKVLATAEVMVSQPKDLETTICLIDVDTEFLASFSTEGDKLMIDAKLEKTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MLQKDKALVKVLATAEVMVSQPKDLETTICLIDVDTEFLASFSTEGDKLMIDAKLEKTSL
490 500 510 520 530 540
520 530 540 550 560 570
pF1KB7 NLRTSNVGNFDIGLMEVLVEKIFDLAFMPAMNAVLGSGVPLPKILNIDFSNADIDVLEDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NLRTSNVGNFDIGLMEVLVEKIFDLAFMPAMNAVLGSGVPLPKILNIDFSNADIDVLEDL
550 560 570 580 590 600
pF1KB7 LVLSA
:::::
CCDS13 LVLSA
610
>>CCDS13212.1 BPIFB3 gene_id:359710|Hs108|chr20 (476 aa)
initn: 937 init1: 347 opt: 843 Z-score: 716.2 bits: 142.2 E(32554): 1.4e-33
Smith-Waterman score: 988; 37.8% identity (69.4% similar) in 471 aa overlap (105-574:28-473)
80 90 100 110 120 130
pF1KB7 SIRDLRNSGYRSAENAYGGHRGLGRYRAAPVGRLHRRELQPGEIPPGVATGAVGPGGLLG
:: : : .. :. .. .. :: : .
CCDS13 MQPVMLALWSLLLLWGLATPCQELLETVGTLAR--IDKDELGKAIQNSLVGEPILQN
10 20 30 40 50
140 150 160 170 180 190
pF1KB7 TGGMLAADGILAGQGGLLGGGGLLGDGGLLGGGGVLGVLGEGGILSTVQGITGLRIVELT
. : .. : . ::::.::::: ::::: :::.::. : ..::.: :::
CCDS13 VLG-----SVTAVNRGLLGSGGLLGGGGLLGHGGVFGVVEE---------LSGLKIEELT
60 70 80 90 100
200 210 220 230 240 250
pF1KB7 LPRVSVRLLPGVGVYLSLYTRVAINGKS-LIGFLDIAVEVNITAKVRLTMDRTGYPRLVI
::.: ..:::: :: :::.:.:... .. : :.:..:.:::.:..: :... : : :..
CCDS13 LPKVLLKLLPGFGVQLSLHTKVGMHCSGPLGGLLQLAAEVNVTSRVALAVSSRGTPILIL
110 120 130 140 150 160
260 270 280 290 300 310
pF1KB7 ERCDTLLGGIKVKLLRGLLPNLVDNLVNRVLADVLPDLLCPIVDVVLGLVNDQLGLVDSL
.::.:::: ...:. ::::. . ..:...: ::: ::::.:: :::.::. :: : .:
CCDS13 KRCSTLLG--HISLFSGLLPTPLFGVVEQMLFKVLPGLLCPVVDSVLGVVNELLGAVLGL
170 180 190 200 210
320 330 340 350 360 370
pF1KB7 IPLGILGSVQYTFSSLPLVTGEFLELDLNTLVGEAGGGLIDYPLGWPAVSPKPMPELPPM
. :: ::::......:::......:::.: .: ..: .::.: . .: ..::
CCDS13 VSLGALGSVEFSLATLPLISNQYIELDINPIVKSVAGDIIDFP---KSRAPA---KVPPK
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB7 GDNTKSQLAMSANFLGSVLTLLQKQHALDLDITNGMFEELPPLTTATLGALIPKVFQQYP
:.: ::. . ...... ::: . :::.::: . ::::. :.::.:... . :
CCDS13 KDHT-SQVMVPLYLFNTTFGLLQTNGALDMDITPELVPSDVPLTTTDLAALLPEALGKLP
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB7 ESCPLIIRIQVLNPPSVMLQKDKALVKVLATAEVMVSQPKDLETTICLIDVDTEFLASFS
:.. ..: . :.: :.. ::::.. :. .:. :: .. .. :...
CCDS13 LHQQLLLFLRVREAPTVTLHNKKALVSLPANIHVLFYVPKGTPESLFELNSVMTVRAQLA
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB7 TEGDKLMIDAKLEKTSLNLRTSNVGNFDIGLMEVLVEKIFDLAFMPAMNAVLGSGVPLPK
. :: :. .::. :... .: . :: . .: . .. .. : .:..: :.::::
CCDS13 PSATKLHISLSLERLSVKVASSFTHAFDGSRLEEWLSHVVGAVYAPKLNVALDVGIPLPK
400 410 420 430 440 450
560 570
pF1KB7 ILNIDFSNADIDVLEDLLVLSA
.:::.:::. ....:. .::.
CCDS13 VLNINFSNSVLEIVENAVVLTVAS
460 470
>>CCDS13211.1 BPIFB6 gene_id:128859|Hs108|chr20 (453 aa)
initn: 654 init1: 240 opt: 742 Z-score: 632.3 bits: 126.6 E(32554): 6.8e-29
Smith-Waterman score: 742; 31.8% identity (70.4% similar) in 399 aa overlap (179-573:58-448)
150 160 170 180 190 200
pF1KB7 GGLLGGGGLLGDGGLLGGGGVLGVLGEGGILSTVQGITGLRIVELTLPRVSVRLLPGVGV
.. ..:::.:.. .. :: ... ..::::.
CCDS13 MDIMNQVQSAMDESHILEKMAAEAGKKQPGMKPIKGITNLKVKDVQLPVITLNFVPGVGI
30 40 50 60 70 80
210 220 230 240 250 260
pF1KB7 YLSLYTRVAINGKSLIGF-LDIAVEVNITAKVRLTMDR-TGYPRLVIERCDTLLGGIKVK
. . : ....:::..: ..: : .:::: :: :. :: : . : :...: ..:..
CCDS13 FQCVSTGMTVTGKSFMGGNMEIIVALNITATNRLLRDEETGLPVFKSEGCEVILVNVKTN
90 100 110 120 130 140
270 280 290 300 310 320
pF1KB7 LLRGLLPNLVDNLVNRVLADVLPDLLCPIVDVVLGLVNDQLGLVDSLIPLGILGSVQYTF
: ..::..:..... .: ::: :.:: .:.:: :: . ... .:.: .:.:.:..
CCDS13 LPSNMLPKMVNKFLDSTLHKVLPGLMCPAIDAVLVYVNRKWTNLSDPMPVGQMGTVKYVL
150 160 170 180 190 200
330 340 350 360 370 380
pF1KB7 SSLPLVTGEFLELDLNTLVGEAGGGLIDYPLGWPAVSPKPMPELPPMGDNTKSQLAMSAN
: : .:. ...::.. .: . : : . :.. .:: :. ::: . :.
CCDS13 MSAPATTASYIQLDFSPVVQQQKGKTIKLADAGEALT---FPEGYAKGS---SQLLLPAT
210 220 230 240 250 260
390 400 410 420 430 440
pF1KB7 FLGSVLTLLQKQHALDLDITNGMFEELPPLTTATLGALIPKVFQQYPESCPLIIRIQVLN
::.. :.:::: .. ..: . :. :::: :: ::. .::.: ::.: :: .:.. .
CCDS13 FLSAELALLQK--SFHVNIQDTMIGELPPQTTKTLARFIPEVAVAYPKSKPLTTQIKIKK
270 280 290 300 310
450 460 470 480 490 500
pF1KB7 PPSVMLQKDKALVKVLATAEVMVSQPKD-LETTICLIDVDTEFLASFSTEGDKLMIDAKL
::.: .. :.:... .: :..... .. .. :..: .. ...:.. ..:.. ..:
CCDS13 PPKVTMKTGKSLLHLHSTLEMFAARWRSKAPMSLFLLEVHFNLKVQYSVHENQLQMATSL
320 330 340 350 360 370
510 520 530 540 550 560
pF1KB7 EKT-SLNLRTSNVGNFDIGLMEVLVEKIFDLAFMPAMNAVLGSGVPLPKILNIDFSNADI
.. ::. ..:..:::. . .. . .. :..:..: :: :.::: .: .... :..
CCDS13 DRLLSLSRKSSSIGNFNERELTGFITSYLEEAYIPVVNDVLQVGLPLPDFLAMNYNLAEL
380 390 400 410 420 430
570
pF1KB7 DVLEDLLVLSA
:..:. :.:
CCDS13 DIVENALMLDLKLG
440 450
>>CCDS13210.1 BPIFB2 gene_id:80341|Hs108|chr20 (458 aa)
initn: 460 init1: 204 opt: 477 Z-score: 411.2 bits: 85.7 E(32554): 1.4e-16
Smith-Waterman score: 477; 26.8% identity (61.4% similar) in 396 aa overlap (186-575:67-452)
160 170 180 190 200 210
pF1KB7 GLLGDGGLLGGGGVLGVLGEGGILSTVQGITGLRIVELTLPRVSVRLLPGVGVYLSLYTR
: .::... .::. .... : :: : .
CCDS13 VSEIGKAPLQRALQVTVPHFLDWSGEALQPTRIRILNVHVPRLHLKFIAGFGVRLLAAAN
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB7 VAINGKSLIGFLDIAVEVNITAKVRLTMDRTGYPRLVIERCDTLLGGIKVKLLRGLLPNL
... :.... :.. : .:.:.. : . : :. . : . . .
CCDS13 FTFKVFRAPEPLELTLPVELLADTRVTQSSIRTPVVSISACSLFSGHANEFDGSNSTSHA
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB7 VDNLVNRVLADVLPDLLC-PIVDVVLGLVNDQLGLVDSLIPLGILGSVQYTFSSLPLVTG
. ::.. . :: . :: : ..: : :: .:: . .: :.: ....:.. :.: ::.
CCDS13 LLVLVQKHIKAVLSNKLCLSISNLVQG-VNVHLGTLIGLNPVGPESQIRYSMVSVPTVTS
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB7 EFLELDLNTLVGEAGGGLIDYPLGWPAVSPKPM-PELPPMGDNTKSQLA---MSANFLGS
... :..:... . :: : . : : . : .:....: .: ... :
CCDS13 DYISLEVNAVL---------FLLGKPIILPTDATPFVLPRHVGTEGSMATVGLSQQLFDS
220 230 240 250 260
400 410 420 430 440 450
pF1KB7 VLTLLQKQHALDLDITNGMFEELPPLTTATLGALIPKVFQQYPESCPLIIRIQVLNPPSV
.: :::: ::.::::. . . :.:..:: :::.: .:.:: :....... : .
CCDS13 ALLLLQKAGALNLDITGQLRSDDNLLNTSALGRLIPEVARQFPEPMPVVLKVRLGATPVA
270 280 290 300 310 320
460 470 480 490 500
pF1KB7 MLQKDKALVKVLATAEVMVSQPKDLETTICLIDVDTEFLASFSTEGDKLM-IDAKLEKTS
::. ..: ... .::... .. .. .:: ... ..:. ::. . : ..
CCDS13 MLHTNNATLRLQPFVEVLATASNSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQ
330 340 350 360 370 380
510 520 530 540 550 560
pF1KB7 LNLRTSNVGNFDIGLMEVLVEKIFDLAFMPAMNAVLGSGVPLPKILNIDFSNADIDVLED
:.. .:::: .: ...:. .:. .. .::.:. :. :: ..:. . .: : :
CCDS13 LTVASSNVGFIDTDQVRTLMGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEIFVYEG
390 400 410 420 430 440
570
pF1KB7 LLVLSA
.:.:.
CCDS13 YVVISSGLFYQS
450
>>CCDS13906.1 BPIFC gene_id:254240|Hs108|chr22 (507 aa)
initn: 263 init1: 214 opt: 367 Z-score: 318.8 bits: 68.7 E(32554): 1.9e-11
Smith-Waterman score: 367; 24.8% identity (58.3% similar) in 408 aa overlap (186-574:81-473)
160 170 180 190 200 210
pF1KB7 GLLGDGGLLGGGGVLGVLGEGGILSTVQGITGLRIVELTLPRVSVRLLPGVGVYLSLYTR
....: ...: .:. ..::::. .: ..
CCDS13 EQMLKEKKLPDLSGSESLEFLKVDYVNYNFSNIKISAFSFPNTSLAFVPGVGIK-ALTNH
60 70 80 90 100
220 230 240 250 260
pF1KB7 VAINGKSLIGF----------LDIAVE-VNITAKVRLTMDRTGYPRLVIERCDTLLGGIK
. : .. :: :. . : .:. . :: . :.: : .. : . :. .
CCDS13 GTANISTDWGFESPLFQDTGGADLFLSGVYFTGIIILTRNDFGHPTLKLQDCYAQLSHAH
110 120 130 140 150 160
270 280 290 300 310 320
pF1KB7 VKLLRGLLPNLVDNLVNRVLADVLPDL---LCPIVDVVLGLVNDQLGLVDSLIPLGILGS
:.. : : : ..... . .: .: ::::. . .: .:. .. : .
CCDS13 VSF-SGELSVLYNSFAEPMEKPILKNLNEMLCPIIASEVKALNANLSTLEVLTKIDNYTL
170 180 190 200 210 220
330 340 350 360 370 380
pF1KB7 VQYTFSSLPLVTGEFLELDLNTLVGEAGGGLIDYPLGWPAVSP-KPMPELPPMGDNTKSQ
..:.. : : .: ..:.:.:. :.. ::: . : .:.: . : .:.
CCDS13 LDYSLISSPEITENYLDLNLK--------GVF-YPLENLTDPPFSPVPFVLPERSNSMLY
230 240 250 260 270
390 400 410 420 430 440
pF1KB7 LAMSANFLGSVLTLLQKQHALDLDITNGMFEELPPLTTATLGALIPKVFQQYPESCPLII
.... :. :. .... ... . . .. :: .. .. . : : :...
CCDS13 IGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSRIAEIYILSQPFMV
280 290 300 310 320 330
450 460 470 480 490
pF1KB7 RIQVLNPPSVMLQKDKALVKVLATAEVMVSQPKDLETTICLIDVDTEFLASFSTE----G
::.. .:: . :: . . . :. .:..:::. .:. : :. .:.:: :. :
CCDS13 RIMATEPPIINLQPGNFTLDIPASI-MMLTQPKN--STVETI-VSMDFVASTSVGLVILG
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB7 DKLMIDAKLEKTSLNLRTSNVGNFDIGLMEVLVEKIFDLAFMPAMNAVLGSGVPLPKILN
..:. . .:.. : : :: .:... .: .. .:. .. .: :: : .: :: . .
CCDS13 QRLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHK
400 410 420 430 440 450
560 570
pF1KB7 IDFSNADIDVLEDLLVLSA
. : :.::.::: .:..:
CCDS13 FLFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
460 470 480 490 500
575 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 05:57:46 2016 done: Fri Nov 4 05:57:46 2016
Total Scan time: 3.300 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]