Result of FASTA (omim) for
pF1KB7139
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7139, 333 aa
1>>>pF1KB7139 333 - 333 aa - 333 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7042+/-0.000286; mu= 10.8131+/- 0.018
mean_var=111.1419+/-22.221, 0's: 0 Z-trim(121.4): 47 B-trim: 281 in 1/53
Lambda= 0.121656
statistics sampled from 37853 (37900) to 37853 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.782), E-opt: 0.2 (0.444), width: 16
Scan time: 8.190
The best scores are: opt bits E(85289)
NP_002051 (OMIM: 121012) gap junction alpha-4 prot ( 333) 2274 409.1 6.5e-114
XP_005270807 (OMIM: 121012) PREDICTED: gap junctio ( 333) 2274 409.1 6.5e-114
XP_016856532 (OMIM: 121012) PREDICTED: gap junctio ( 333) 2274 409.1 6.5e-114
NP_000156 (OMIM: 104100,121014,133200,164200,18610 ( 382) 995 184.7 2.7e-46
NP_068773 (OMIM: 121015,601885) gap junction alpha ( 435) 989 183.7 6.3e-46
XP_011533350 (OMIM: 121015,601885) PREDICTED: gap ( 435) 989 183.7 6.3e-46
NP_859054 (OMIM: 108770,121013,612474,614049) gap ( 358) 935 174.2 3.8e-43
NP_005257 (OMIM: 108770,121013,612474,614049) gap ( 358) 935 174.2 3.8e-43
XP_016856533 (OMIM: 108770,121013,612474,614049) P ( 358) 935 174.2 3.8e-43
XP_005273008 (OMIM: 108770,121013,612474,614049) P ( 358) 935 174.2 3.8e-43
NP_110399 (OMIM: 611923) gap junction alpha-9 prot ( 515) 887 165.8 1.8e-40
XP_011507719 (OMIM: 116200,600897,612474) PREDICTE ( 427) 881 164.7 3.1e-40
XP_011507718 (OMIM: 116200,600897,612474) PREDICTE ( 433) 881 164.7 3.2e-40
NP_005258 (OMIM: 116200,600897,612474) gap junctio ( 433) 881 164.7 3.2e-40
NP_115991 (OMIM: 611924) gap junction alpha-10 pro ( 543) 882 165.0 3.4e-40
NP_003995 (OMIM: 121011,124500,148210,148350,14920 ( 226) 487 95.4 1.2e-19
XP_011533351 (OMIM: 121011,124500,148210,148350,14 ( 226) 487 95.4 1.2e-19
NP_001005752 (OMIM: 133200,220290,603324,612644) g ( 270) 477 93.7 4.8e-19
NP_076872 (OMIM: 133200,220290,603324,612644) gap ( 270) 477 93.7 4.8e-19
NP_001103691 (OMIM: 129500,220290,304400,604418,61 ( 261) 464 91.4 2.3e-18
XP_016875847 (OMIM: 129500,220290,304400,604418,61 ( 261) 464 91.4 2.3e-18
NP_001103690 (OMIM: 129500,220290,304400,604418,61 ( 261) 464 91.4 2.3e-18
XP_016875848 (OMIM: 129500,220290,304400,604418,61 ( 261) 464 91.4 2.3e-18
NP_006774 (OMIM: 129500,220290,304400,604418,61264 ( 261) 464 91.4 2.3e-18
XP_016875846 (OMIM: 129500,220290,304400,604418,61 ( 261) 464 91.4 2.3e-18
NP_001103689 (OMIM: 129500,220290,304400,604418,61 ( 261) 464 91.4 2.3e-18
XP_016875849 (OMIM: 129500,220290,304400,604418,61 ( 261) 464 91.4 2.3e-18
NP_065168 (OMIM: 608803,608804,613206,613480) gap ( 439) 449 88.9 2.1e-17
XP_011538981 (OMIM: 133200,605425) PREDICTED: gap ( 266) 441 87.4 3.8e-17
NP_694944 (OMIM: 133200,605425) gap junction beta- ( 266) 441 87.4 3.8e-17
NP_000157 (OMIM: 302800,304040) gap junction beta- ( 283) 439 87.0 5.1e-17
XP_011529209 (OMIM: 302800,304040) PREDICTED: gap ( 283) 439 87.0 5.1e-17
XP_016884897 (OMIM: 302800,304040) PREDICTED: gap ( 283) 439 87.0 5.1e-17
NP_001091111 (OMIM: 302800,304040) gap junction be ( 283) 439 87.0 5.1e-17
XP_005256977 (OMIM: 608655) PREDICTED: gap junctio ( 396) 438 87.0 7.5e-17
XP_005256978 (OMIM: 608655) PREDICTED: gap junctio ( 396) 438 87.0 7.5e-17
NP_001073852 (OMIM: 608655) gap junction gamma-1 p ( 396) 438 87.0 7.5e-17
NP_005488 (OMIM: 608655) gap junction gamma-1 prot ( 396) 438 87.0 7.5e-17
NP_065711 (OMIM: 607058) gap junction delta-2 prot ( 321) 428 85.1 2.1e-16
XP_005270808 (OMIM: 604493) PREDICTED: gap junctio ( 273) 425 84.6 2.7e-16
NP_005259 (OMIM: 604493) gap junction beta-5 prote ( 273) 425 84.6 2.7e-16
NP_940970 (OMIM: 611921) gap junction beta-7 prote ( 223) 419 83.5 4.8e-16
XP_005248773 (OMIM: 611921) PREDICTED: gap junctio ( 223) 419 83.5 4.8e-16
NP_689343 (OMIM: 607425) gap junction delta-3 prot ( 294) 387 77.9 2.9e-14
NP_853516 (OMIM: 611925) gap junction gamma-3 prot ( 279) 322 66.5 7.6e-11
XP_016877927 (OMIM: 607058) PREDICTED: gap junctio ( 270) 293 61.4 2.5e-09
NP_699199 (OMIM: 611922) gap junction delta-4 prot ( 370) 286 60.3 7.6e-09
>>NP_002051 (OMIM: 121012) gap junction alpha-4 protein (333 aa)
initn: 2274 init1: 2274 opt: 2274 Z-score: 2166.1 bits: 409.1 E(85289): 6.5e-114
Smith-Waterman score: 2274; 99.7% identity (99.7% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 MEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RARQGQDAPPTQGTSSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQNWANLTTEERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RARQGQDAPPTQGTSSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQNWANLTTEERL
250 260 270 280 290 300
310 320 330
pF1KB7 ASSRPPLFLDPPPQNGQKSPSRPSSSASKKQYV
:::::::::::::::::: ::::::::::::::
NP_002 ASSRPPLFLDPPPQNGQKPPSRPSSSASKKQYV
310 320 330
>>XP_005270807 (OMIM: 121012) PREDICTED: gap junction al (333 aa)
initn: 2274 init1: 2274 opt: 2274 Z-score: 2166.1 bits: 409.1 E(85289): 6.5e-114
Smith-Waterman score: 2274; 99.7% identity (99.7% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 MEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RARQGQDAPPTQGTSSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQNWANLTTEERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RARQGQDAPPTQGTSSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQNWANLTTEERL
250 260 270 280 290 300
310 320 330
pF1KB7 ASSRPPLFLDPPPQNGQKSPSRPSSSASKKQYV
:::::::::::::::::: ::::::::::::::
XP_005 ASSRPPLFLDPPPQNGQKPPSRPSSSASKKQYV
310 320 330
>>XP_016856532 (OMIM: 121012) PREDICTED: gap junction al (333 aa)
initn: 2274 init1: 2274 opt: 2274 Z-score: 2166.1 bits: 409.1 E(85289): 6.5e-114
Smith-Waterman score: 2274; 99.7% identity (99.7% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 MEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RARQGQDAPPTQGTSSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQNWANLTTEERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RARQGQDAPPTQGTSSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQNWANLTTEERL
250 260 270 280 290 300
310 320 330
pF1KB7 ASSRPPLFLDPPPQNGQKSPSRPSSSASKKQYV
:::::::::::::::::: ::::::::::::::
XP_016 ASSRPPLFLDPPPQNGQKPPSRPSSSASKKQYV
310 320 330
>>NP_000156 (OMIM: 104100,121014,133200,164200,186100,21 (382 aa)
initn: 1039 init1: 967 opt: 995 Z-score: 952.1 bits: 184.7 E(85289): 2.7e-46
Smith-Waterman score: 1023; 49.1% identity (73.9% similar) in 322 aa overlap (1-298:1-317)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::. : ::::.:: .::. ::.::.::::::::.:: : ::.:::::: :.::: :::
NP_000 MGDWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
: :::::..:::::.:.::::..:::.:::.::.::.:. :.::.: .:: ::.. .
NP_000 CENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNKKEEELKVAQTDG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWT
.:. : .: . : .. : :....::.:. ::. :.: ::..:..:: :: .::..
NP_000 VNVDMHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSIFEVAFLLIQWYIYGFS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 MEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGM
. :..:.: :::. ::::.::::::::::::::::.:.::.::..:: ... . :.
NP_000 LSAVYTCKRDPCPHQVDCFLSRPTEKTIFIIFMLVVSLVSLALNIIELFYVFFK----GV
190 200 210 220 230
250 260 270
pF1KB7 RARQGQDAPPTQGTSS--DPYTD---QVFFYL-----PVGQ-GPSSPP------------
. : . : ..::. .: : : . :. :.. .: :::
NP_000 KDRVKGKSDPYHATSGALSPAKDCGSQKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNNS
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB7 -CPTYNGLSSSEQNWANLTTEERLASSRPPLFLDPPPQNGQKSPSRPSSSASKKQYV
: .:: ..::::::: ..:.
NP_000 SCRNYNK-QASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFPDDNQNSKKLAAGHELQP
300 310 320 330 340 350
>>NP_068773 (OMIM: 121015,601885) gap junction alpha-3 p (435 aa)
initn: 1064 init1: 603 opt: 989 Z-score: 945.5 bits: 183.7 E(85289): 6.3e-46
Smith-Waterman score: 1020; 46.8% identity (67.2% similar) in 372 aa overlap (1-328:1-359)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::.:: .::...::::::.::.:::::::::::.:: :.:.::::::::: ::: :::
NP_068 MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
: :::::.::::::::.:.::..:::::::.:::::... : ::. ...: : . : ..
NP_068 CENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEEKKKEREEE-EQLKRES
70 80 90 100 110
130 140 150 160 170
pF1KB7 PQVERALAAVERQMAKISVAED-GRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGW
:. . : . . : .: ::.:. :::. ::: ... :...:.::. ::. :::.
NP_068 PSPK------EPPQDNPSSRDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 TMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRG
..:.. :.: ::: ::::.::::::::::::::.:. ::.::.::. :: . :..:
NP_068 ELKPLYRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWKKLKQG
180 190 200 210 220 230
240 250 260 270
pF1KB7 MRARQGQDA---------PPTQGTSSDPYTDQVFF--YL-----PVGQG-----PSSPP-
. .: : :: :: :: : . . : : :.::. :..::
NP_068 VTSRLGPDASEAPLGTADPPPLPPSSRPPAVAIGFPPYYAHTAAPLGQARAVGYPGAPPP
240 250 260 270 280 290
280 290 300 310
pF1KB7 ------------------CPTYNG---LSSSEQNWANLTTEERLASSRPPLFLDPPPQNG
::: : .:::::: ..:.. :: . : .
NP_068 AADFKLLALTEARGKGQSAKLYNGHHHLLMTEQNWANQAAERQ-----PPALKAYPAAST
300 310 320 330 340
320 330
pF1KB7 QKSPSRPSSSASKKQYV
.:: : .:.:
NP_068 PAAPS-PVGSSSPPLAHEAEAGAAPLLLDGSGSSLEGSALAGTPEEEEQAVTTAAQMHQP
350 360 370 380 390 400
>>XP_011533350 (OMIM: 121015,601885) PREDICTED: gap junc (435 aa)
initn: 1064 init1: 603 opt: 989 Z-score: 945.5 bits: 183.7 E(85289): 6.3e-46
Smith-Waterman score: 1020; 46.8% identity (67.2% similar) in 372 aa overlap (1-328:1-359)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::.:: .::...::::::.::.:::::::::::.:: :.:.::::::::: ::: :::
XP_011 MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
: :::::.::::::::.:.::..:::::::.:::::... : ::. ...: : . : ..
XP_011 CENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEEKKKEREEE-EQLKRES
70 80 90 100 110
130 140 150 160 170
pF1KB7 PQVERALAAVERQMAKISVAED-GRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGW
:. . : . . : .: ::.:. :::. ::: ... :...:.::. ::. :::.
XP_011 PSPK------EPPQDNPSSRDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 TMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRG
..:.. :.: ::: ::::.::::::::::::::.:. ::.::.::. :: . :..:
XP_011 ELKPLYRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWKKLKQG
180 190 200 210 220 230
240 250 260 270
pF1KB7 MRARQGQDA---------PPTQGTSSDPYTDQVFF--YL-----PVGQG-----PSSPP-
. .: : :: :: :: : . . : : :.::. :..::
XP_011 VTSRLGPDASEAPLGTADPPPLPPSSRPPAVAIGFPPYYAHTAAPLGQARAVGYPGAPPP
240 250 260 270 280 290
280 290 300 310
pF1KB7 ------------------CPTYNG---LSSSEQNWANLTTEERLASSRPPLFLDPPPQNG
::: : .:::::: ..:.. :: . : .
XP_011 AADFKLLALTEARGKGQSAKLYNGHHHLLMTEQNWANQAAERQ-----PPALKAYPAAST
300 310 320 330 340
320 330
pF1KB7 QKSPSRPSSSASKKQYV
.:: : .:.:
XP_011 PAAPS-PVGSSSPPLAHEAEAGAAPLLLDGSGSSLEGSALAGTPEEEEQAVTTAAQMHQP
350 360 370 380 390 400
>>NP_859054 (OMIM: 108770,121013,612474,614049) gap junc (358 aa)
initn: 944 init1: 579 opt: 935 Z-score: 895.6 bits: 174.2 E(85289): 3.8e-43
Smith-Waterman score: 935; 45.8% identity (71.9% similar) in 334 aa overlap (1-324:1-325)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::.:: ..:..:..:::::::.:::::::::.:.:: :.:: :::::.::.:.: :::
NP_859 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
: :::::::::::::::::::..:::::.:::.::... : .:. . .:.: :: ..
NP_859 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAE-RAKEVRG
70 80 90 100 110
130 140 150 160 170
pF1KB7 P-QVERALAAVERQMAKISVAEDG--RLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLY
. : .: . :..: :.: :. ..:.:..::: :.: ....:.::. ::. .:
NP_859 SGSYEYPVA----EKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 GWTMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCL-
: . . ::.:.:::. :.:.:::::::..::.:::.:. .::.:.: :: :: . .
NP_859 GIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 SRGMRARQG----QDAPPTQGT--SSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQN
.: .. :: : . :. : : : : : . .::.. ... .:.::
NP_859 QRFVKPRQHMAKCQLSGPSVGIVQSCTPPPD---FNQCLENGPGGKFFNPFSNNMASQQN
240 250 260 270 280 290
300 310 320 330
pF1KB7 WANLTTEERLASSRPPLFLDPPPQNGQKSPSRPSSSASKKQYV
::.::. .. . : . ::: : :.
NP_859 TDNLVTEQVRGQEQTPGEGFIQVRYGQK-PEVPNGVSPGHRLPHGYHSDKRRLSKASSKA
300 310 320 330 340 350
NP_859 RSDDLSV
>>NP_005257 (OMIM: 108770,121013,612474,614049) gap junc (358 aa)
initn: 944 init1: 579 opt: 935 Z-score: 895.6 bits: 174.2 E(85289): 3.8e-43
Smith-Waterman score: 935; 45.8% identity (71.9% similar) in 334 aa overlap (1-324:1-325)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::.:: ..:..:..:::::::.:::::::::.:.:: :.:: :::::.::.:.: :::
NP_005 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
: :::::::::::::::::::..:::::.:::.::... : .:. . .:.: :: ..
NP_005 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAE-RAKEVRG
70 80 90 100 110
130 140 150 160 170
pF1KB7 P-QVERALAAVERQMAKISVAEDG--RLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLY
. : .: . :..: :.: :. ..:.:..::: :.: ....:.::. ::. .:
NP_005 SGSYEYPVA----EKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 GWTMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCL-
: . . ::.:.:::. :.:.:::::::..::.:::.:. .::.:.: :: :: . .
NP_005 GIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 SRGMRARQG----QDAPPTQGT--SSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQN
.: .. :: : . :. : : : : : . .::.. ... .:.::
NP_005 QRFVKPRQHMAKCQLSGPSVGIVQSCTPPPD---FNQCLENGPGGKFFNPFSNNMASQQN
240 250 260 270 280 290
300 310 320 330
pF1KB7 WANLTTEERLASSRPPLFLDPPPQNGQKSPSRPSSSASKKQYV
::.::. .. . : . ::: : :.
NP_005 TDNLVTEQVRGQEQTPGEGFIQVRYGQK-PEVPNGVSPGHRLPHGYHSDKRRLSKASSKA
300 310 320 330 340 350
NP_005 RSDDLSV
>>XP_016856533 (OMIM: 108770,121013,612474,614049) PREDI (358 aa)
initn: 944 init1: 579 opt: 935 Z-score: 895.6 bits: 174.2 E(85289): 3.8e-43
Smith-Waterman score: 935; 45.8% identity (71.9% similar) in 334 aa overlap (1-324:1-325)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::.:: ..:..:..:::::::.:::::::::.:.:: :.:: :::::.::.:.: :::
XP_016 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
: :::::::::::::::::::..:::::.:::.::... : .:. . .:.: :: ..
XP_016 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAE-RAKEVRG
70 80 90 100 110
130 140 150 160 170
pF1KB7 P-QVERALAAVERQMAKISVAEDG--RLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLY
. : .: . :..: :.: :. ..:.:..::: :.: ....:.::. ::. .:
XP_016 SGSYEYPVA----EKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 GWTMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCL-
: . . ::.:.:::. :.:.:::::::..::.:::.:. .::.:.: :: :: . .
XP_016 GIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 SRGMRARQG----QDAPPTQGT--SSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQN
.: .. :: : . :. : : : : : . .::.. ... .:.::
XP_016 QRFVKPRQHMAKCQLSGPSVGIVQSCTPPPD---FNQCLENGPGGKFFNPFSNNMASQQN
240 250 260 270 280 290
300 310 320 330
pF1KB7 WANLTTEERLASSRPPLFLDPPPQNGQKSPSRPSSSASKKQYV
::.::. .. . : . ::: : :.
XP_016 TDNLVTEQVRGQEQTPGEGFIQVRYGQK-PEVPNGVSPGHRLPHGYHSDKRRLSKASSKA
300 310 320 330 340 350
XP_016 RSDDLSV
>>XP_005273008 (OMIM: 108770,121013,612474,614049) PREDI (358 aa)
initn: 944 init1: 579 opt: 935 Z-score: 895.6 bits: 174.2 E(85289): 3.8e-43
Smith-Waterman score: 935; 45.8% identity (71.9% similar) in 334 aa overlap (1-324:1-325)
10 20 30 40 50 60
pF1KB7 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
::::.:: ..:..:..:::::::.:::::::::.:.:: :.:: :::::.::.:.: :::
XP_005 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
: :::::::::::::::::::..:::::.:::.::... : .:. . .:.: :: ..
XP_005 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAE-RAKEVRG
70 80 90 100 110
130 140 150 160 170
pF1KB7 P-QVERALAAVERQMAKISVAEDG--RLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLY
. : .: . :..: :.: :. ..:.:..::: :.: ....:.::. ::. .:
XP_005 SGSYEYPVA----EKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 GWTMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCL-
: . . ::.:.:::. :.:.:::::::..::.:::.:. .::.:.: :: :: . .
XP_005 GIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 SRGMRARQG----QDAPPTQGT--SSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQN
.: .. :: : . :. : : : : : . .::.. ... .:.::
XP_005 QRFVKPRQHMAKCQLSGPSVGIVQSCTPPPD---FNQCLENGPGGKFFNPFSNNMASQQN
240 250 260 270 280 290
300 310 320 330
pF1KB7 WANLTTEERLASSRPPLFLDPPPQNGQKSPSRPSSSASKKQYV
::.::. .. . : . ::: : :.
XP_005 TDNLVTEQVRGQEQTPGEGFIQVRYGQK-PEVPNGVSPGHRLPHGYHSDKRRLSKASSKA
300 310 320 330 340 350
XP_005 RSDDLSV
333 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 05:12:35 2016 done: Fri Nov 4 05:12:36 2016
Total Scan time: 8.190 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]