Result of FASTA (omim) for
pF1KB7024
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7024, 426 aa
1>>>pF1KB7024 426 - 426 aa - 426 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3349+/-0.0003; mu= 15.3183+/- 0.019
mean_var=160.2391+/-32.039, 0's: 0 Z-trim(122.5): 48 B-trim: 0 in 0/51
Lambda= 0.101319
statistics sampled from 40773 (40830) to 40773 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.479), width: 16
Scan time: 9.120
The best scores are: opt bits E(85289)
NP_005895 (OMIM: 602932,612229) mothers against de ( 426) 3033 454.9 1.8e-127
NP_001177750 (OMIM: 602932,612229) mothers against ( 425) 3016 452.4 1e-126
NP_001177751 (OMIM: 602932,612229) mothers against ( 211) 1494 229.5 6.1e-60
NP_001177752 (OMIM: 602932,612229) mothers against ( 238) 1457 224.2 2.8e-58
NP_005576 (OMIM: 602931,614823) mothers against de ( 496) 1112 174.1 6.8e-43
XP_011519863 (OMIM: 602931,614823) PREDICTED: moth ( 235) 842 134.3 3.2e-31
XP_011519861 (OMIM: 603109,613795) PREDICTED: moth ( 381) 473 80.6 7.5e-15
XP_005266460 (OMIM: 603295,615342) PREDICTED: moth ( 393) 353 63.1 1.5e-09
XP_016881239 (OMIM: 601366) PREDICTED: mothers aga ( 227) 324 58.6 1.9e-08
NP_001138574 (OMIM: 603109,613795) mothers against ( 320) 324 58.7 2.4e-08
NP_001138576 (OMIM: 603109,613795) mothers against ( 230) 313 57.0 6e-08
>>NP_005895 (OMIM: 602932,612229) mothers against decape (426 aa)
initn: 3033 init1: 3033 opt: 3033 Z-score: 2409.4 bits: 454.9 E(85289): 1.8e-127
Smith-Waterman score: 3033; 100.0% identity (100.0% similar) in 426 aa overlap (1-426:1-426)
10 20 30 40 50 60
pF1KB7 MFRTKRSALVRRLWRSRAPGGEDEEEGAGGGGGGGELRGEGATDSRAHGAGGGGPGRAGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MFRTKRSALVRRLWRSRAPGGEDEEEGAGGGGGGGELRGEGATDSRAHGAGGGGPGRAGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CLGKAVRGAKGHHHPHPPAAGAGAAGGAEADLKALTHSVLKKLKERQLELLLQAVESRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 CLGKAVRGAKGHHHPHPPAAGAGAAGGAEADLKALTHSVLKKLKERQLELLLQAVESRGG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TRTACLLLPGRLDCRLGPGAPAGAQPAQPPSSYSLPLLLCKVFRWPDLRHSSEVKRLCCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TRTACLLLPGRLDCRLGPGAPAGAQPAQPPSSYSLPLLLCKVFRWPDLRHSSEVKRLCCC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ESYGKINPELVCCNPHHLSRLCELESPPPPYSRYPMDFLKPTADCPDAVPSSAETGGTNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ESYGKINPELVCCNPHHLSRLCELESPPPPYSRYPMDFLKPTADCPDAVPSSAETGGTNY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LAPGGLSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LAPGGLSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 LNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 FPGFSIKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FPGFSIKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLE
370 380 390 400 410 420
pF1KB7 VIFNSR
::::::
NP_005 VIFNSR
>>NP_001177750 (OMIM: 602932,612229) mothers against dec (425 aa)
initn: 1588 init1: 1588 opt: 3016 Z-score: 2395.9 bits: 452.4 E(85289): 1e-126
Smith-Waterman score: 3016; 99.8% identity (99.8% similar) in 426 aa overlap (1-426:1-425)
10 20 30 40 50 60
pF1KB7 MFRTKRSALVRRLWRSRAPGGEDEEEGAGGGGGGGELRGEGATDSRAHGAGGGGPGRAGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFRTKRSALVRRLWRSRAPGGEDEEEGAGGGGGGGELRGEGATDSRAHGAGGGGPGRAGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CLGKAVRGAKGHHHPHPPAAGAGAAGGAEADLKALTHSVLKKLKERQLELLLQAVESRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLGKAVRGAKGHHHPHPPAAGAGAAGGAEADLKALTHSVLKKLKERQLELLLQAVESRGG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TRTACLLLPGRLDCRLGPGAPAGAQPAQPPSSYSLPLLLCKVFRWPDLRHSSEVKRLCCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRTACLLLPGRLDCRLGPGAPAGAQPAQPPSSYSLPLLLCKVFRWPDLRHSSEVKRLCCC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ESYGKINPELVCCNPHHLSRLCELESPPPPYSRYPMDFLKPTADCPDAVPSSAETGGTNY
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
NP_001 ESYGKINPELVCCNPHHLSRLCELESPPPPYSRYPMDFLKPT-DCPDAVPSSAETGGTNY
190 200 210 220 230
250 260 270 280 290 300
pF1KB7 LAPGGLSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAPGGLSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB7 LNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKV
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB7 FPGFSIKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPGFSIKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLE
360 370 380 390 400 410
pF1KB7 VIFNSR
::::::
NP_001 VIFNSR
420
>>NP_001177751 (OMIM: 602932,612229) mothers against dec (211 aa)
initn: 1494 init1: 1494 opt: 1494 Z-score: 1197.1 bits: 229.5 E(85289): 6.1e-60
Smith-Waterman score: 1494; 100.0% identity (100.0% similar) in 211 aa overlap (216-426:1-211)
190 200 210 220 230 240
pF1KB7 INPELVCCNPHHLSRLCELESPPPPYSRYPMDFLKPTADCPDAVPSSAETGGTNYLAPGG
::::::::::::::::::::::::::::::
NP_001 MDFLKPTADCPDAVPSSAETGGTNYLAPGG
10 20 30
250 260 270 280 290 300
pF1KB7 LSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQLNSDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQLNSDN
40 50 60 70 80 90
310 320 330 340 350 360
pF1KB7 KSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKVFPGFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKVFPGFS
100 110 120 130 140 150
370 380 390 400 410 420
pF1KB7 IKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNS
160 170 180 190 200 210
pF1KB7 R
:
NP_001 R
>>NP_001177752 (OMIM: 602932,612229) mothers against dec (238 aa)
initn: 1457 init1: 1457 opt: 1457 Z-score: 1167.3 bits: 224.2 E(85289): 2.8e-58
Smith-Waterman score: 1457; 98.6% identity (99.5% similar) in 209 aa overlap (218-426:30-238)
190 200 210 220 230 240
pF1KB7 PELVCCNPHHLSRLCELESPPPPYSRYPMDFLKPTADCPDAVPSSAETGGTNYLAPGGLS
..: ::::::::::::::::::::::::::
NP_001 MCGLSFMLFRACLKMDLGVFICVFISFSPLFKSTADCPDAVPSSAETGGTNYLAPGGLS
10 20 30 40 50
250 260 270 280 290 300
pF1KB7 DSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQLNSDNKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQLNSDNKS
60 70 80 90 100 110
310 320 330 340 350 360
pF1KB7 QLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKVFPGFSIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKVFPGFSIK
120 130 140 150 160 170
370 380 390 400 410 420
pF1KB7 AFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNSR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNSR
180 190 200 210 220 230
>>NP_005576 (OMIM: 602931,614823) mothers against decape (496 aa)
initn: 1307 init1: 559 opt: 1112 Z-score: 891.0 bits: 174.1 E(85289): 6.8e-43
Smith-Waterman score: 1251; 47.7% identity (68.5% similar) in 444 aa overlap (17-425:66-494)
10 20 30
pF1KB7 MFRTKRSALVRRLWRSRAPGGEDEEEGAGGGG----GGGELR----
: : ..:: :.: .:: :
NP_005 DGSLGSRAEPAPRAREGGGCGRSEVRPVAPRRPRDAVGQRGAQGAGRRRRAGGPPRPMSE
40 50 60 70 80 90
40 50 60 70 80
pF1KB7 -GEGATDSRAHGAGGGGPG--------RAGCCLGKAVRGAKGHHHPHPPAAGAG--AAGG
: :: .: : :::: . ::: . .: . . : :::. :::
NP_005 PGAGAGSSLLDVAEPGGPGWLPESDCETVTCCLFSERDAAGAPRDASDPLAGAALEPAGG
100 110 120 130 140 150
90 100 110 120 130
pF1KB7 A------------EADLKALTHSVLKKLKERQLELLLQAVESRGGTRTACLLLPGRLDCR
. : .::..:.:.::.::::.:. ::.:::::::. .:.:.: : : :
NP_005 GRSREARSRLLLLEQELKTVTYSLLKRLKERSLDTLLEAVESRGGVPGGCVLVP-RADLR
160 170 180 190 200 210
140 150 160 170 180 190
pF1KB7 LGPGAPAGAQPAQPPSSYSLPLLLCKVFRWPDLRHSSEVKRLCCCESYGKI-NPELVCCN
:: .::: ::. ::: ..::::::.:. :.: :: :.:.. . ::::
NP_005 LG------GQPA-PPQ-----LLLGRLFRWPDLQHAVELKPLCGCHSFAAAADGPTVCCN
220 230 240 250 260
200 210 220 230 240 250
pF1KB7 PHHLSRLCELESPPPPYSRY-PMDFLKPTADCPDAVPSSAETGGTNYL--APGGLSDSQL
:.:.:::: ::::::::: : : :: : :.. : .:: .:: : ::: .::...
NP_005 PYHFSRLCGPESPPPPYSRLSPRDEYKPL-DLSDSTLSYTETEATNSLITAPGEFSDASM
270 280 290 300 310 320
260 270 280 290 300 310
pF1KB7 LLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQLNSDNKSQLVQ
. :::: :::::..::::::: : . ...::::::::.:::::::: ...:. :.
NP_005 SPDATKPSHWCSVAYWEHRTRVGRLYAVYDQAVSIFYDLPQGSGFCLGQLNLEQRSESVR
330 340 350 360 370 380
320 330 340 350 360 370
pF1KB7 KVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKVFPGFSIKAFDY
..::::: :: :..: ::::.:::. .:::..: ::: : .:.:.:.:: ::.:::.::.
NP_005 RTRSKIGFGILLSKEPDGVWAYNRGEHPIFVNSPTLDAPGGRALVVRKVPPGYSIKVFDF
390 400 410 420 430 440
380 390 400 410 420
pF1KB7 EKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNSR
:.. .::. . . . :. .:.:::.:::: ::.::::.:::::::...:.
NP_005 ERS-GLQHAPEPDAADGPYDPNSVRISFAKGWGPCYSRQFITSCPCWLEILLNNPR
450 460 470 480 490
>>XP_011519863 (OMIM: 602931,614823) PREDICTED: mothers (235 aa)
initn: 850 init1: 559 opt: 842 Z-score: 681.5 bits: 134.3 E(85289): 3.2e-31
Smith-Waterman score: 842; 54.5% identity (79.0% similar) in 224 aa overlap (205-425:12-233)
180 190 200 210 220 230
pF1KB7 KRLCCCESYGKINPELVCCNPHHLSRLCELESPPPPYSRY-PMDFLKPTADCPDAVPSSA
.:::::::: : : :: : :.. : .
XP_011 MSRMGKPIETQKSPPPPYSRLSPRDEYKPL-DLSDSTLSYT
10 20 30 40
240 250 260 270 280 290
pF1KB7 ETGGTNYL--APGGLSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLP
:: .:: : ::: .::... . :::: :::::..::::::: : . ...::::::
XP_011 ETEATNSLITAPGEFSDASMSPDATKPSHWCSVAYWEHRTRVGRLYAVYDQAVSIFYDLP
50 60 70 80 90 100
300 310 320 330 340 350
pF1KB7 QGNGFCLGQLNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPD
::.:::::::: ...:. :...::::: :: :..: ::::.:::. .:::..: ::: :
XP_011 QGSGFCLGQLNLEQRSESVRRTRSKIGFGILLSKEPDGVWAYNRGEHPIFVNSPTLDAPG
110 120 130 140 150 160
360 370 380 390 400 410
pF1KB7 SRTLLVHKVFPGFSIKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQF
.:.:.:.:: ::.:::.::.:.. .::. . . . :. .:.:::.:::: ::.:::
XP_011 GRALVVRKVPPGYSIKVFDFERS-GLQHAPEPDAADGPYDPNSVRISFAKGWGPCYSRQF
170 180 190 200 210
420
pF1KB7 ISSCPCWLEVIFNSR
:.:::::::...:.
XP_011 ITSCPCWLEILLNNPR
220 230
>>XP_011519861 (OMIM: 603109,613795) PREDICTED: mothers (381 aa)
initn: 339 init1: 172 opt: 473 Z-score: 387.6 bits: 80.6 E(85289): 7.5e-15
Smith-Waterman score: 520; 30.4% identity (58.0% similar) in 352 aa overlap (86-424:25-357)
60 70 80 90 100 110
pF1KB7 GRAGCCLGKAVRGAKGHHHPHPPAAGAGAAGGAEADLKALTHSVLKKLKER-QLELLLQA
: : . ..:..::::. ::. : .:
XP_011 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKA
10 20 30 40 50
120 130 140 150 160 170
pF1KB7 VESRGGTRTACLLLPGRLDCRLGPGAPAGAQPAQPPSSYSLP-LLLCKVFRWPDLRHSSE
. ... . : :. .: :: :: : .:: .. :...:::::. :
XP_011 ITTQN-VNTKCITIPRSLDGRL-----------QVSHRKGLPHVIYCRLWRWPDLHSHHE
60 70 80 90 100
180 190 200 210 220 230
pF1KB7 VKRLCCCESYGKINPELVCCNPHHLSRLCELESPPPPYSRYPMDFLKPTADCPDAVPSSA
.. . :: ... . :: ::.: .:. :.::: : :. .. : . .
XP_011 LRAMELCEFAFNMKKDEVCVNPYHYQRVETPETPPPGY-------LSEDGETSDHQMNHS
110 120 130 140 150
240 250 260 270 280
pF1KB7 ETGGTNYLAPGGLSDSQ--LLLEP---GDRSHWCVVAYWEEKTRVGRLYCVQEPSL--DI
.:. :.:. .: .. : :.: . . :: ..:.: . :::. . ...::. :
XP_011 MDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDG
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB7 FYDLPQGNGFCLGQLNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSAT
: : ... :::: :.. :.. :. .: .:: :..: :.. :. ::..: .
XP_011 FTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPN
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB7 LDNPDS-RTLLVHKVFPGFSIKAFDYEKAYSL--QRPND-HEFMQQPWTGFTVQISFVKG
.. . . : :. :: ..: :. .. .: : :. : . : :...:::::
XP_011 CNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKG
280 290 300 310 320 330
410 420
pF1KB7 WGQCYTRQFISSCPCWLEVIFNSR
:: : :: ..: :::.:. .:
XP_011 WGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS
340 350 360 370 380
>>XP_005266460 (OMIM: 603295,615342) PREDICTED: mothers (393 aa)
initn: 303 init1: 152 opt: 353 Z-score: 292.6 bits: 63.1 E(85289): 1.5e-09
Smith-Waterman score: 380; 29.7% identity (54.5% similar) in 330 aa overlap (98-413:40-347)
70 80 90 100 110 120
pF1KB7 GAKGHHHPHPPAAGAGAAGGAEADLKALTHSVLKKLKERQLEL-LLQAVESRGGTRTACL
:..::::... . :. . : : . :.
XP_005 LFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELERALSCPGQPSKCV
10 20 30 40 50 60
130 140 150 160 170 180
pF1KB7 LLPGRLDCRLGPGAPAGAQPAQPPSSYSLP-LLLCKVFRWPDLRHSSEVKRLCCCE-SYG
.: :: :: : .:: .. :.:.:::::. :.: : ::: .:
XP_005 TIPRSLDGRL-----------QVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFG
70 80 90 100 110
190 200 210 220 230 240
pF1KB7 KINPELVCCNPHHLSRL-CELESPPPPYSRYPMDFLKPTADCPDAVPSSAETGGTNYLA-
. . : :: ::.: :. ...:: :: ... .. : .: . :.
XP_005 SKQKE-VCINPYHYRRVETPVDTPPLPYHA------TEASETQSGQPVDATADRHVVLSI
120 130 140 150 160 170
250 260 270 280 290
pF1KB7 PGGLSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPS--LDIFYDLPQGNG--FCL
:.: :: .::: :::.: ..:::. . .. : .: : : :..: :::
XP_005 PNGDFRPVCYEEP---QHWCSVAYYELNNRVGETFQASSRSVLIDGFTD-PSNNRNRFCL
180 190 200 210 220
300 310 320 330 340 350
pF1KB7 GQLNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDS-RTLLV
: :.. :... ....: .:: :..: :.. :. ::..: . . . . :
XP_005 GLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRNCNYQHGFHPATV
230 240 250 260 270 280
360 370 380 390 400 410
pF1KB7 HKVFPGFSIKAFDYEKAYSLQRPNDH---EFMQQPWTGFTVQISFVK-GWGQCYTRQFIS
:. : :.:.:. . .: . : : . . :...:::: . :.:.:
XP_005 CKIPSGCSLKVFNNQLFAQLLAQSVHHGFEVVYELTKMCTIRMSFVKVAMKAGEPRKFLS
290 300 310 320 330 340
420
pF1KB7 SCPCWLEVIFNSR
XP_005 GKERQLGLYMEVKAFSFITCYFVCCKVLANESSISKYGLIKVSGYV
350 360 370 380 390
>>XP_016881239 (OMIM: 601366) PREDICTED: mothers against (227 aa)
initn: 277 init1: 131 opt: 324 Z-score: 272.4 bits: 58.6 E(85289): 1.9e-08
Smith-Waterman score: 342; 34.2% identity (60.9% similar) in 202 aa overlap (234-424:2-203)
210 220 230 240 250 260
pF1KB7 LESPPPPYSRYPMDFLKPTADCPDAVPSSAETGGTNYLAPGGLS--DSQLLLEPGDRSH-
.::. :.: :: . .: :.: :.
XP_016 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEP
10 20 30
270 280 290 300 310
pF1KB7 --WCVVAYWEEKTRVGRLYCVQEPSL--DIFYDLPQGNGFCLGQLNSDNKSQLVQKVRSK
:: .::.: . :::. . ...::: : : : ... :::: :.. :.. :. .: .
XP_016 AFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRH
40 50 60 70 80 90
320 330 340 350 360 370
pF1KB7 IGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDS-RTLLVHKVFPGFSIKAFDYEKAY
:: :..: :.. :. ::..: . .. . . : :. :: ..: :. ..
XP_016 IGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFA
100 110 120 130 140 150
380 390 400 410 420
pF1KB7 SL--QRPND-HEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNSR
.: : :. : . : :...::::::: : :: ..: :::.:. .:
XP_016 ALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDK
160 170 180 190 200 210
XP_016 VLTQMGSPSVRCSSMS
220
>>NP_001138574 (OMIM: 603109,613795) mothers against dec (320 aa)
initn: 265 init1: 131 opt: 324 Z-score: 270.7 bits: 58.7 E(85289): 2.4e-08
Smith-Waterman score: 355; 28.0% identity (54.3% similar) in 293 aa overlap (180-424:4-296)
150 160 170 180 190 200
pF1KB7 PSSYSLPLLLCKVFRWPDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCELESPP-
:: ... . :: ::.: .:. ::
NP_001 MELCEFAFNMKKDEVCVNPYHYQRVETPVLPPV
10 20 30
210 220 230
pF1KB7 --PPYSRYPMDF-------------------LKPTADCPDAVPSS--AETG---------
: ... : .: ..: .. :.. : . .: :
NP_001 LVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQMNH
40 50 60 70 80 90
240 250 260 270 280
pF1KB7 ----GTNYLAPGGLSDSQ--LLLEP---GDRSHWCVVAYWEEKTRVGRLYCVQEPSL--D
:. :.:. .: .. : :.: . . :: ..:.: . :::. . ...::. :
NP_001 SMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVD
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 IFYDLPQGNGFCLGQLNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSA
: : ... :::: :.. :.. :. .: .:: :..: :.. :. ::..:
NP_001 GFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB7 TLDNPDS-RTLLVHKVFPGFSIKAFDYEKAYSL--QRPND-HEFMQQPWTGFTVQISFVK
. .. . . : :. :: ..: :. .. .: : :. : . : :...::::
NP_001 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK
220 230 240 250 260 270
410 420
pF1KB7 GWGQCYTRQFISSCPCWLEVIFNSR
::: : :: ..: :::.:. .:
NP_001 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS
280 290 300 310 320
426 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:16:30 2016 done: Thu Nov 3 18:16:31 2016
Total Scan time: 9.120 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]