FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6774, 151 aa
  1>>>pF1KB6774 151 - 151 aa - 151 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0448+/-0.000657; mu= 12.9059+/- 0.040
 mean_var=59.4313+/-11.662, 0's: 0 Z-trim(110.1): 15  B-trim: 7 in 1/49
 Lambda= 0.166367
 statistics sampled from 11373 (11385) to 11373 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.35), width:  16
 Scan time:  1.510

The best scores are:                                      opt bits E(32554)
CCDS9856.1 NGB gene_id:58157|Hs108|chr14           ( 151) 1005 248.9   9e-67


>>CCDS9856.1 NGB gene_id:58157|Hs108|chr14                (151 aa)
 initn: 1005 init1: 1005 opt: 1005  Z-score: 1312.3  bits: 248.9 E(32554): 9e-67
Smith-Waterman score: 1005; 100.0% identity (100.0% similar) in 151 aa overlap (1-151:1-151)

               10        20        30        40        50        60
pF1KB6 MERPEPELIRQSWRAVSRSPLEHGTVLFARLFALEPDLLPLFQYNCRQFSSPEDCLSSPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 MERPEPELIRQSWRAVSRSPLEHGTVLFARLFALEPDLLPLFQYNCRQFSSPEDCLSSPE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 FLDHIRKVMLVIDAAVTNVEDLSSLEEYLASLGRKHRAVGVKLSSFSTVGESLLYMLEKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 FLDHIRKVMLVIDAAVTNVEDLSSLEEYLASLGRKHRAVGVKLSSFSTVGESLLYMLEKC
               70        80        90       100       110       120

              130       140       150 
pF1KB6 LGPAFTPATRAAWSQLYGAVVQAMSRGWDGE
       :::::::::::::::::::::::::::::::
CCDS98 LGPAFTPATRAAWSQLYGAVVQAMSRGWDGE
              130       140       150 




151 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:57:05 2016 done: Fri Nov  4 23:57:05 2016
 Total Scan time:  1.510 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]