Result of FASTA (omim) for
pF1KB6764
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6764, 148 aa
1>>>pF1KB6764 148 - 148 aa - 148 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9027+/-0.000362; mu= 13.4657+/- 0.022
mean_var=57.1546+/-11.697, 0's: 0 Z-trim(112.8): 25 B-trim: 694 in 1/51
Lambda= 0.169648
statistics sampled from 21793 (21812) to 21793 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.256), width: 16
Scan time: 4.540
The best scores are: opt bits E(85289)
NP_000230 (OMIM: 105200,153450) lysozyme C precurs ( 148) 1028 259.5 1.4e-69
NP_776246 (OMIM: 612749) sperm acrosome membrane-a ( 215) 500 130.4 1.5e-30
XP_016885001 (OMIM: 300593) PREDICTED: sperm acros ( 159) 482 125.9 2.5e-29
NP_995328 (OMIM: 300593) sperm acrosome-associated ( 159) 482 125.9 2.5e-29
NP_898881 (OMIM: 612748) lysozyme-like protein 2 [ ( 194) 482 126.0 3e-29
NP_065159 (OMIM: 612751) lysozyme-like protein 6 p ( 148) 428 112.7 2.2e-25
NP_001186880 (OMIM: 612751) lysozyme-like protein ( 148) 428 112.7 2.2e-25
XP_016861195 (OMIM: 612750) PREDICTED: lysozyme-li ( 146) 382 101.4 5.4e-22
NP_653235 (OMIM: 612750) lysozyme-like protein 4 p ( 146) 382 101.4 5.4e-22
NP_001291315 (OMIM: 612750) lysozyme-like protein ( 146) 382 101.4 5.4e-22
XP_016861194 (OMIM: 612750) PREDICTED: lysozyme-li ( 146) 382 101.4 5.4e-22
NP_001304155 (OMIM: 612749) sperm acrosome membran ( 112) 359 95.7 2.2e-20
NP_001304154 (OMIM: 612749) sperm acrosome membran ( 123) 355 94.8 4.6e-20
NP_002280 (OMIM: 149750) alpha-lactalbumin precurs ( 142) 334 89.7 1.8e-18
XP_006719458 (OMIM: 149750) PREDICTED: alpha-lacta ( 149) 334 89.7 1.9e-18
XP_011517608 (OMIM: 612748) PREDICTED: lysozyme-li ( 181) 334 89.7 2.2e-18
XP_011531657 (OMIM: 612750) PREDICTED: lysozyme-li ( 146) 321 86.5 1.7e-17
XP_011517609 (OMIM: 612748) PREDICTED: lysozyme-li ( 163) 319 86.0 2.6e-17
>>NP_000230 (OMIM: 105200,153450) lysozyme C precursor [ (148 aa)
initn: 1028 init1: 1028 opt: 1028 Z-score: 1370.2 bits: 259.5 E(85289): 1.4e-69
Smith-Waterman score: 1028; 99.3% identity (100.0% similar) in 148 aa overlap (1-148:1-148)
10 20 30 40 50 60
pF1KB6 MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRVVRD
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
NP_000 TNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRD
70 80 90 100 110 120
130 140
pF1KB6 PQGIRAWVAWRNRCQNRDVRQYVQGCGV
::::::::::::::::::::::::::::
NP_000 PQGIRAWVAWRNRCQNRDVRQYVQGCGV
130 140
>>NP_776246 (OMIM: 612749) sperm acrosome membrane-assoc (215 aa)
initn: 478 init1: 222 opt: 500 Z-score: 669.4 bits: 130.4 E(85289): 1.5e-30
Smith-Waterman score: 500; 48.6% identity (78.5% similar) in 144 aa overlap (3-146:73-213)
10 20 30
pF1KB6 MKALIVLGLVLLSVTVQGKVFERCELARTLKR
::. : :: . ..:.. ::::::.:.
NP_776 SGGGSTSAAGIEARSRALRRRWCPAGIMLLALVCLLSCLLPSS-EAKLYGRCELARVLHD
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB6 LGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAV
.:.::::: :::.:.::: . ::.:. : .:.: : ::. :::::::: ::.. .:..
NP_776 FGLDGYRGYSLADWVCLAYFTSGFNAAALDYEA-DGSTNNGIFQINSRRWCSN-LTPNVP
110 120 130 140 150
100 110 120 130 140
pF1KB6 NACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
:.:.. :: ::. :. :.: :: .....:::. : :::..::..:. ..:.::
NP_776 NVCRMYCSDLLNPNLKDTVICAMKITQEPQGLGYWEAWRHHCQGKDLTEWVDGCDF
160 170 180 190 200 210
>>XP_016885001 (OMIM: 300593) PREDICTED: sperm acrosome- (159 aa)
initn: 451 init1: 192 opt: 482 Z-score: 647.5 bits: 125.9 E(85289): 2.5e-29
Smith-Waterman score: 482; 42.3% identity (77.9% similar) in 149 aa overlap (1-146:1-147)
10 20 30 40 50
pF1KB6 MKA---LIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYN
::: ..: .:. :::..:..:::::: :.: :..::.: ....:.:.:..:::..
XP_016 MKAWGTVVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 TRATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRV
: ...: : :..:::::.:: .::..: .: : ::..: ::. .: : . :::..
XP_016 TAFVDHNP-DGSSEYGIFQLNSAWWCDNGITPTK-NLCHMDCHDLLNRHILDDIRCAKQI
70 80 90 100 110
120 130 140
pF1KB6 VRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
: . .:. ::..:: .:...:. ....::
XP_016 VSSQNGLSAWTSWRLHCSGHDLSEWLKGCDMHVKIDPKIHP
120 130 140 150
>>NP_995328 (OMIM: 300593) sperm acrosome-associated pro (159 aa)
initn: 451 init1: 192 opt: 482 Z-score: 647.5 bits: 125.9 E(85289): 2.5e-29
Smith-Waterman score: 482; 42.3% identity (77.9% similar) in 149 aa overlap (1-146:1-147)
10 20 30 40 50
pF1KB6 MKA---LIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYN
::: ..: .:. :::..:..:::::: :.: :..::.: ....:.:.:..:::..
NP_995 MKAWGTVVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 TRATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRV
: ...: : :..:::::.:: .::..: .: : ::..: ::. .: : . :::..
NP_995 TAFVDHNP-DGSSEYGIFQLNSAWWCDNGITPTK-NLCHMDCHDLLNRHILDDIRCAKQI
70 80 90 100 110
120 130 140
pF1KB6 VRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
: . .:. ::..:: .:...:. ....::
NP_995 VSSQNGLSAWTSWRLHCSGHDLSEWLKGCDMHVKIDPKIHP
120 130 140 150
>>NP_898881 (OMIM: 612748) lysozyme-like protein 2 [Homo (194 aa)
initn: 472 init1: 210 opt: 482 Z-score: 646.2 bits: 126.0 E(85289): 3e-29
Smith-Waterman score: 482; 45.6% identity (73.2% similar) in 149 aa overlap (1-148:47-193)
10 20
pF1KB6 MKALIVLGLVLLSVT-VQGKVFERCELART
::: .: :. :: ...:.. ::.::.
NP_898 VSSADSTEKSASAAGTRNLPFQFCLRQALRMKAAGILTLIGCLVTGAESKIYTRCKLAKI
20 30 40 50 60 70
30 40 50 60 70 80
pF1KB6 LKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKNP
..: :.:.: :.::.::.:.: .:::::: : . : : ::::::::: :: ::
NP_898 FSRAGLDNYWGFSLGNWICMAYYESGYNTTAQTV-LDDGSIDYGIFQINSFAWCRRGKLK
80 90 100 110 120 130
90 100 110 120 130 140
pF1KB6 GAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
: ::..::::. :...::. :::..:.. ::. : .:...:..::. .. . : :
NP_898 -ENNHCHVACSALVTDDLTDAIICAKKIVKETQGMNYWQGWKKHCEGRDLSDWKKDCEVS
140 150 160 170 180 190
>>NP_065159 (OMIM: 612751) lysozyme-like protein 6 precu (148 aa)
initn: 420 init1: 178 opt: 428 Z-score: 576.5 bits: 112.7 E(85289): 2.2e-25
Smith-Waterman score: 428; 42.1% identity (69.7% similar) in 145 aa overlap (2-146:3-145)
10 20 30 40 50
pF1KB6 MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
:::.. . . . :.... ::.::..:. .::..: ::..:.::: :: .:
NP_065 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRVVR
: :: : : :::.:::::.::::: :. . : ::..:. ::. :. .. ::::.:
NP_065 KINENA-DGSFDYGLFQINSHYWCNDYKSYSE-NLCHVDCQDLLNPNLLAGIHCAKRIVS
70 80 90 100 110
120 130 140
pF1KB6 DPQGIRAWVAWRNRCQNRDVRQYVQGCGV
.:. :: :: .:..: . .. ::
NP_065 GARGMNNWVEWRLHCSGRPLFYWLTGCRLR
120 130 140
>>NP_001186880 (OMIM: 612751) lysozyme-like protein 6 pr (148 aa)
initn: 420 init1: 178 opt: 428 Z-score: 576.5 bits: 112.7 E(85289): 2.2e-25
Smith-Waterman score: 428; 42.1% identity (69.7% similar) in 145 aa overlap (2-146:3-145)
10 20 30 40 50
pF1KB6 MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
:::.. . . . :.... ::.::..:. .::..: ::..:.::: :: .:
NP_001 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRVVR
: :: : : :::.:::::.::::: :. . : ::..:. ::. :. .. ::::.:
NP_001 KINENA-DGSFDYGLFQINSHYWCNDYKSYSE-NLCHVDCQDLLNPNLLAGIHCAKRIVS
70 80 90 100 110
120 130 140
pF1KB6 DPQGIRAWVAWRNRCQNRDVRQYVQGCGV
.:. :: :: .:..: . .. ::
NP_001 GARGMNNWVEWRLHCSGRPLFYWLTGCRLR
120 130 140
>>XP_016861195 (OMIM: 612750) PREDICTED: lysozyme-like p (146 aa)
initn: 404 init1: 191 opt: 382 Z-score: 515.8 bits: 101.4 E(85289): 5.4e-22
Smith-Waterman score: 382; 38.9% identity (65.1% similar) in 149 aa overlap (1-146:1-144)
10 20 30 40 50
pF1KB6 MKALIVLGLVLLSVTVQGK-VFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
::: .::.:. :. .: .. :: .:. :. :.: ..: :: ::.::: .:: .:
XP_016 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCND-GKNPGAVNACHLSCSALLQDNIADAVACAKRVV
: :. . : .:.::. . ::.: :.: ::.::::::. :. .. ::: .:
XP_016 AIYENTREGYTGFGLFQMRGSDWCGDHGRN-----RCHMSCSALLNPNLEKTIKCAKTIV
70 80 90 100 110
120 130 140
pF1KB6 RDPQGIRAWVAWRNRCQNRD-VRQYVQGCGV
. .:. :: .: :: : . ....::
XP_016 KGKEGMGAWPTWSRYCQYSDTLARWLDGCKL
120 130 140
>>NP_653235 (OMIM: 612750) lysozyme-like protein 4 precu (146 aa)
initn: 404 init1: 191 opt: 382 Z-score: 515.8 bits: 101.4 E(85289): 5.4e-22
Smith-Waterman score: 382; 38.9% identity (65.1% similar) in 149 aa overlap (1-146:1-144)
10 20 30 40 50
pF1KB6 MKALIVLGLVLLSVTVQGK-VFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
::: .::.:. :. .: .. :: .:. :. :.: ..: :: ::.::: .:: .:
NP_653 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCND-GKNPGAVNACHLSCSALLQDNIADAVACAKRVV
: :. . : .:.::. . ::.: :.: ::.::::::. :. .. ::: .:
NP_653 AIYENTREGYTGFGLFQMRGSDWCGDHGRN-----RCHMSCSALLNPNLEKTIKCAKTIV
70 80 90 100 110
120 130 140
pF1KB6 RDPQGIRAWVAWRNRCQNRD-VRQYVQGCGV
. .:. :: .: :: : . ....::
NP_653 KGKEGMGAWPTWSRYCQYSDTLARWLDGCKL
120 130 140
>>NP_001291315 (OMIM: 612750) lysozyme-like protein 4 pr (146 aa)
initn: 404 init1: 191 opt: 382 Z-score: 515.8 bits: 101.4 E(85289): 5.4e-22
Smith-Waterman score: 382; 38.9% identity (65.1% similar) in 149 aa overlap (1-146:1-144)
10 20 30 40 50
pF1KB6 MKALIVLGLVLLSVTVQGK-VFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
::: .::.:. :. .: .. :: .:. :. :.: ..: :: ::.::: .:: .:
NP_001 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCND-GKNPGAVNACHLSCSALLQDNIADAVACAKRVV
: :. . : .:.::. . ::.: :.: ::.::::::. :. .. ::: .:
NP_001 AIYENTREGYTGFGLFQMRGSDWCGDHGRN-----RCHMSCSALLNPNLEKTIKCAKTIV
70 80 90 100 110
120 130 140
pF1KB6 RDPQGIRAWVAWRNRCQNRD-VRQYVQGCGV
. .:. :: .: :: : . ....::
NP_001 KGKEGMGAWPTWSRYCQYSDTLARWLDGCKL
120 130 140
148 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:52:18 2016 done: Fri Nov 4 23:52:19 2016
Total Scan time: 4.540 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]