Result of FASTA (omim) for
pF1KB6742
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6742, 142 aa
1>>>pF1KB6742 142 - 142 aa - 142 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8200+/-0.000285; mu= 13.8625+/- 0.018
mean_var=58.5629+/-11.855, 0's: 0 Z-trim(118.3): 53 B-trim: 53 in 1/52
Lambda= 0.167596
statistics sampled from 31054 (31114) to 31054 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.365), width: 16
Scan time: 4.490
The best scores are: opt bits E(85289)
NP_004461 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 950 237.2 7e-63
NP_001128680 (OMIM: 186946) peptidyl-prolyl cis-tr ( 142) 950 237.2 7e-63
NP_476433 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 950 237.2 7e-63
XP_005273905 (OMIM: 186946) PREDICTED: peptidyl-pr ( 142) 950 237.2 7e-63
NP_060416 (OMIM: 614505,614557) peptidyl-prolyl ci ( 211) 346 91.2 8.8e-19
NP_001128684 (OMIM: 607062) peptidyl-prolyl cis-tr ( 221) 334 88.3 6.8e-18
XP_011523402 (OMIM: 259450,607063,610968) PREDICTE ( 510) 335 88.8 1.1e-17
NP_068758 (OMIM: 259450,607063,610968) peptidyl-pr ( 582) 335 88.9 1.3e-17
XP_011523401 (OMIM: 259450,607063,610968) PREDICTE ( 601) 335 88.9 1.3e-17
NP_851939 (OMIM: 607062) peptidyl-prolyl cis-trans ( 222) 329 87.1 1.6e-17
NP_057678 (OMIM: 610571) peptidyl-prolyl cis-trans ( 201) 324 85.9 3.4e-17
NP_001271272 (OMIM: 616257) peptidyl-prolyl cis-tr ( 338) 324 86.0 5.1e-17
NP_009201 (OMIM: 616257) peptidyl-prolyl cis-trans ( 570) 324 86.2 7.8e-17
NP_001271270 (OMIM: 616257) peptidyl-prolyl cis-tr ( 623) 324 86.2 8.4e-17
NP_001139249 (OMIM: 602623,608516) peptidyl-prolyl ( 268) 318 84.5 1.2e-16
NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 318 84.7 1.8e-16
NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 318 84.7 1.8e-16
NP_004108 (OMIM: 602623,608516) peptidyl-prolyl ci ( 457) 318 84.7 1.8e-16
NP_000792 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 305 81.1 4.9e-16
NP_463460 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 305 81.1 4.9e-16
XP_011534867 (OMIM: 186947) PREDICTED: peptidyl-pr ( 191) 305 81.3 7.8e-16
NP_002004 (OMIM: 186947) peptidyl-prolyl cis-trans ( 224) 305 81.3 8.9e-16
NP_001137254 (OMIM: 610571) peptidyl-prolyl cis-tr ( 146) 302 80.5 1e-15
XP_011513417 (OMIM: 616257) PREDICTED: peptidyl-pr ( 359) 291 78.1 1.4e-14
XP_011519231 (OMIM: 600611) PREDICTED: peptidyl-pr ( 414) 291 78.1 1.5e-14
NP_002005 (OMIM: 600611) peptidyl-prolyl cis-trans ( 459) 291 78.1 1.7e-14
NP_004107 (OMIM: 600620) peptidyl-prolyl cis-trans ( 108) 272 73.2 1.2e-13
XP_005246695 (OMIM: 607062) PREDICTED: peptidyl-pr ( 181) 269 72.6 3.1e-13
XP_016876582 (OMIM: 186947) PREDICTED: peptidyl-pr ( 196) 258 69.9 2.1e-12
XP_016876581 (OMIM: 186947) PREDICTED: peptidyl-pr ( 229) 258 70.0 2.4e-12
XP_016859085 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 231 63.2 9.3e-11
XP_016859083 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 231 63.2 9.3e-11
NP_001309893 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 231 63.2 9.3e-11
XP_016859084 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 231 63.2 9.3e-11
XP_016859082 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 231 63.2 9.3e-11
NP_001309892 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 231 63.2 9.3e-11
XP_016868231 (OMIM: 604839) PREDICTED: inactive pe ( 266) 176 50.2 2.5e-06
XP_006716216 (OMIM: 604839) PREDICTED: inactive pe ( 282) 176 50.2 2.6e-06
XP_016868230 (OMIM: 604839) PREDICTED: inactive pe ( 317) 176 50.2 2.9e-06
NP_001128683 (OMIM: 604839) inactive peptidyl-prol ( 322) 176 50.2 2.9e-06
NP_003593 (OMIM: 604839) inactive peptidyl-prolyl ( 327) 176 50.2 3e-06
NP_001137253 (OMIM: 610571) peptidyl-prolyl cis-tr ( 99) 167 47.7 5.1e-06
NP_473374 (OMIM: 600620) peptidyl-prolyl cis-trans ( 80) 158 45.5 1.9e-05
XP_011531001 (OMIM: 600620) PREDICTED: peptidyl-pr ( 100) 158 45.6 2.3e-05
NP_001295302 (OMIM: 604840) peptidyl-prolyl cis-tr ( 412) 150 44.0 0.00028
XP_011526166 (OMIM: 604840) PREDICTED: peptidyl-pr ( 383) 141 41.8 0.0012
XP_011526165 (OMIM: 604840) PREDICTED: peptidyl-pr ( 413) 141 41.8 0.0013
NP_036313 (OMIM: 604840) peptidyl-prolyl cis-trans ( 413) 141 41.8 0.0013
NP_001268233 (OMIM: 604839) inactive peptidyl-prol ( 297) 129 38.9 0.0072
>>NP_004461 (OMIM: 186946) peptidyl-prolyl cis-trans iso (142 aa)
initn: 950 init1: 950 opt: 950 Z-score: 1249.9 bits: 237.2 E(85289): 7e-63
Smith-Waterman score: 950; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142)
10 20 30 40 50 60
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
70 80 90 100 110 120
130 140
pF1KB6 IPGGATLVFEVELLKIERRTEL
::::::::::::::::::::::
NP_004 IPGGATLVFEVELLKIERRTEL
130 140
>>NP_001128680 (OMIM: 186946) peptidyl-prolyl cis-trans (142 aa)
initn: 950 init1: 950 opt: 950 Z-score: 1249.9 bits: 237.2 E(85289): 7e-63
Smith-Waterman score: 950; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142)
10 20 30 40 50 60
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
70 80 90 100 110 120
130 140
pF1KB6 IPGGATLVFEVELLKIERRTEL
::::::::::::::::::::::
NP_001 IPGGATLVFEVELLKIERRTEL
130 140
>>NP_476433 (OMIM: 186946) peptidyl-prolyl cis-trans iso (142 aa)
initn: 950 init1: 950 opt: 950 Z-score: 1249.9 bits: 237.2 E(85289): 7e-63
Smith-Waterman score: 950; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142)
10 20 30 40 50 60
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_476 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_476 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
70 80 90 100 110 120
130 140
pF1KB6 IPGGATLVFEVELLKIERRTEL
::::::::::::::::::::::
NP_476 IPGGATLVFEVELLKIERRTEL
130 140
>>XP_005273905 (OMIM: 186946) PREDICTED: peptidyl-prolyl (142 aa)
initn: 950 init1: 950 opt: 950 Z-score: 1249.9 bits: 237.2 E(85289): 7e-63
Smith-Waterman score: 950; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142)
10 20 30 40 50 60
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
70 80 90 100 110 120
130 140
pF1KB6 IPGGATLVFEVELLKIERRTEL
::::::::::::::::::::::
XP_005 IPGGATLVFEVELLKIERRTEL
130 140
>>NP_060416 (OMIM: 614505,614557) peptidyl-prolyl cis-tr (211 aa)
initn: 302 init1: 208 opt: 346 Z-score: 458.2 bits: 91.2 E(85289): 8.8e-19
Smith-Waterman score: 346; 43.9% identity (68.3% similar) in 139 aa overlap (1-136:1-134)
10 20 30 40 50 60
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
::: : .::.. .... : : . :... : . : :.. ::.. .:: : :
NP_060 MRL--FLWNAVLTLFVTSLIGALIPEPEVKIEVLQKPFI--CHRKTKGGDLMLVHYEGYL
10 20 30 40 50
70 80 90 100 110
pF1KB6 E-DGTEFDSSLPQN--QPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGA
: ::. : :. .: ::. :.:: ...::::::: ::: ::::::.:: ::::..:
NP_060 EKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGK
60 70 80 90 100 110
120 130 140
pF1KB6 PPKIPGGATLVFEVELLKIERRTEL
::: .::.:...::.:
NP_060 G-KIPPESTLIFNIDLLEIRNGPRSHESFQEMDLNDDWKLSKDEVKAYLKKEFEKHGAVV
120 130 140 150 160 170
>>NP_001128684 (OMIM: 607062) peptidyl-prolyl cis-trans (221 aa)
initn: 286 init1: 218 opt: 334 Z-score: 442.2 bits: 88.3 E(85289): 6.8e-18
Smith-Waterman score: 334; 46.6% identity (69.8% similar) in 116 aa overlap (26-138:30-145)
10 20 30 40 50
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHY
:. ....: : .: ..: :.:::.:. ::
NP_001 MPKTMHFLFRFIVFFYLWGLFTAQRQKKEESTEEVKIEVLHRPENCSKTSKKGDLLNAHY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 TGKL-EDGTEFDSSLPQNQ--PFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYG
: : .::..: : ::. : : ::.:::::: : .. :: :::::.::: ..::
NP_001 DGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYG
70 80 90 100 110 120
120 130 140
pF1KB6 ERGAPPKIPGGATLVFEVELLKIERRTEL
..: ::: :::.::.:: . .
NP_001 KEGYEGKIPPDATLIFEIELYAVTKGPRSIETFKQIDMDNDRQLSKAEINLYLQREFEKD
130 140 150 160 170 180
>>XP_011523402 (OMIM: 259450,607063,610968) PREDICTED: p (510 aa)
initn: 723 init1: 326 opt: 335 Z-score: 438.2 bits: 88.8 E(85289): 1.1e-17
Smith-Waterman score: 335; 46.2% identity (69.8% similar) in 106 aa overlap (31-136:65-170)
10 20 30 40 50 60
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
.:... : ::: . :: ...::.: :
XP_011 RSLIQAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTL
40 50 60 70 80 90
70 80 90 100 110 120
pF1KB6 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
::: ::.: .. . .:.: .::: :::::::: ::.::..:: :.:::.:
XP_011 LDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTV
100 110 120 130 140 150
130 140
pF1KB6 IPGGATLVFEVELLKIERRTEL
:: :.:::.: :. .
XP_011 IPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDS
160 170 180 190 200 210
>--
initn: 397 init1: 302 opt: 308 Z-score: 403.0 bits: 82.3 E(85289): 1e-15
Smith-Waterman score: 308; 46.2% identity (74.2% similar) in 93 aa overlap (42-134:188-280)
20 30 40 50 60 70
pF1KB6 LSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLP
: .. :: ...::.:.: ::: ::::
XP_011 QASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDSSYS
160 170 180 190 200 210
80 90 100 110 120 130
pF1KB6 QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV
.:. . .: : .: : :::: : : ::.:...:: .:.::: :. ::::.:.:.:.:
XP_011 RNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPGSAVLIFNV
220 230 240 250 260 270
140
pF1KB6 ELLKIERRTEL
...
XP_011 HVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSGETDAGSHE
280 290 300 310 320 330
>--
initn: 249 init1: 158 opt: 215 Z-score: 281.4 bits: 59.8 E(85289): 6.2e-09
Smith-Waterman score: 227; 39.1% identity (63.5% similar) in 115 aa overlap (42-137:301-414)
20 30 40 50 60
pF1KB6 LSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTE-FDS--
: .. :: ...::. .: :::. : :
XP_011 AVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSGE
280 290 300 310 320 330
70 80 90 100 110
pF1KB6 --------SLPQ--------NQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGY
: :. . : .::...::.: : :: ::: ::.:.:..: .:..
XP_011 TDAGSHEPSRPHFRGQRHDYGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLAH
340 350 360 370 380 390
120 130 140
pF1KB6 GERGAPPKIPGGATLVFEVELLKIERRTEL
:: :: .::.:.:.:::::.. :
XP_011 GESGARG-VPGSAVLLFEVELVSREDGLPTGYLFVWHKDPPANLFEDMDLNKDGEVPPEE
400 410 420 430 440
>>NP_068758 (OMIM: 259450,607063,610968) peptidyl-prolyl (582 aa)
initn: 973 init1: 326 opt: 335 Z-score: 437.4 bits: 88.9 E(85289): 1.3e-17
Smith-Waterman score: 335; 46.2% identity (69.8% similar) in 106 aa overlap (31-136:156-261)
10 20 30 40 50 60
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
.:... : ::: . :: ...::.: :
NP_068 GSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTL
130 140 150 160 170 180
70 80 90 100 110 120
pF1KB6 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
::: ::.: .. . .:.: .::: :::::::: ::.::..:: :.:::.:
NP_068 LDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTV
190 200 210 220 230 240
130 140
pF1KB6 IPGGATLVFEVELLKIERRTEL
:: :.:::.: :. .
NP_068 IPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDS
250 260 270 280 290 300
>--
initn: 397 init1: 302 opt: 308 Z-score: 402.1 bits: 82.3 E(85289): 1.2e-15
Smith-Waterman score: 308; 46.2% identity (74.2% similar) in 93 aa overlap (42-134:279-371)
20 30 40 50 60 70
pF1KB6 LSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLP
: .. :: ...::.:.: ::: ::::
NP_068 QASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDSSYS
250 260 270 280 290 300
80 90 100 110 120 130
pF1KB6 QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV
.:. . .: : .: : :::: : : ::.:...:: .:.::: :. ::::.:.:.:.:
NP_068 RNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPGSAVLIFNV
310 320 330 340 350 360
140
pF1KB6 ELLKIERRTEL
...
NP_068 HVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSHDYGAPQEA
370 380 390 400 410 420
>--
initn: 321 init1: 301 opt: 301 Z-score: 393.0 bits: 80.6 E(85289): 3.8e-15
Smith-Waterman score: 301; 45.3% identity (71.6% similar) in 95 aa overlap (42-136:55-149)
20 30 40 50 60 70
pF1KB6 LSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLP
:: . . :: ...::.: .::: .::::
NP_068 QAVGRGLGRASPAGGPLEDVVIERYHIPRACPREVQMGDFVRYHYNGTFEDGKKFDSSYD
30 40 50 60 70 80
80 90 100 110 120 130
pF1KB6 QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV
.: .. .:.:..: : :.::.::: .:.:.:..: .:::: : :: ::: :.:
NP_068 RNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGLAGLIPPDATLYFDV
90 100 110 120 130 140
140
pF1KB6 ELLKIERRTEL
:: .
NP_068 VLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTLLDGTSFDTSYSKGGTYDTY
150 160 170 180 190 200
>--
initn: 261 init1: 213 opt: 268 Z-score: 349.9 bits: 72.7 E(85289): 9.5e-13
Smith-Waterman score: 268; 43.8% identity (74.0% similar) in 96 aa overlap (42-137:392-486)
20 30 40 50 60 70
pF1KB6 LSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLP
: .. :: ...::. .: :::.. .:
NP_068 AVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSHD
370 380 390 400 410 420
80 90 100 110 120 130
pF1KB6 QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV
. : .::...::.: : :: ::: ::.:.:..: .:..:: :: .::.:.:.:::
NP_068 YGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLAHGESGARG-VPGSAVLLFEV
430 440 450 460 470 480
140
pF1KB6 ELLKIERRTEL
::.. :
NP_068 ELVSREDGLPTGYLFVWHKDPPANLFEDMDLNKDGEVPPEEFSTFIKAQVSEGKGRLMPG
490 500 510 520 530 540
>>XP_011523401 (OMIM: 259450,607063,610968) PREDICTED: p (601 aa)
initn: 973 init1: 326 opt: 335 Z-score: 437.2 bits: 88.9 E(85289): 1.3e-17
Smith-Waterman score: 335; 46.2% identity (69.8% similar) in 106 aa overlap (31-136:156-261)
10 20 30 40 50 60
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKL
.:... : ::: . :: ...::.: :
XP_011 GSIGLAGLIPPDATLYFDVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTL
130 140 150 160 170 180
70 80 90 100 110 120
pF1KB6 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK
::: ::.: .. . .:.: .::: :::::::: ::.::..:: :.:::.:
XP_011 LDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTV
190 200 210 220 230 240
130 140
pF1KB6 IPGGATLVFEVELLKIERRTEL
:: :.:::.: :. .
XP_011 IPPQASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDS
250 260 270 280 290 300
>--
initn: 397 init1: 302 opt: 308 Z-score: 401.9 bits: 82.3 E(85289): 1.2e-15
Smith-Waterman score: 308; 46.2% identity (74.2% similar) in 93 aa overlap (42-134:279-371)
20 30 40 50 60 70
pF1KB6 LSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLP
: .. :: ...::.:.: ::: ::::
XP_011 QASLVFHVLLIDVHNPKDAVQLETLELPPGCVRRAGAGDFMRYHYNGSLMDGTLFDSSYS
250 260 270 280 290 300
80 90 100 110 120 130
pF1KB6 QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV
.:. . .: : .: : :::: : : ::.:...:: .:.::: :. ::::.:.:.:.:
XP_011 RNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPGSAVLIFNV
310 320 330 340 350 360
140
pF1KB6 ELLKIERRTEL
...
XP_011 HVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSGETDAGSHE
370 380 390 400 410 420
>--
initn: 321 init1: 301 opt: 301 Z-score: 392.8 bits: 80.6 E(85289): 3.9e-15
Smith-Waterman score: 301; 45.3% identity (71.6% similar) in 95 aa overlap (42-136:55-149)
20 30 40 50 60 70
pF1KB6 LSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLP
:: . . :: ...::.: .::: .::::
XP_011 QAVGRGLGRASPAGGPLEDVVIERYHIPRACPREVQMGDFVRYHYNGTFEDGKKFDSSYD
30 40 50 60 70 80
80 90 100 110 120 130
pF1KB6 QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV
.: .. .:.:..: : :.::.::: .:.:.:..: .:::: : :: ::: :.:
XP_011 RNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGLAGLIPPDATLYFDV
90 100 110 120 130 140
140
pF1KB6 ELLKIERRTEL
:: .
XP_011 VLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTLLDGTSFDTSYSKGGTYDTY
150 160 170 180 190 200
>--
initn: 249 init1: 158 opt: 215 Z-score: 280.4 bits: 59.8 E(85289): 7e-09
Smith-Waterman score: 227; 39.1% identity (63.5% similar) in 115 aa overlap (42-137:392-505)
20 30 40 50 60
pF1KB6 LSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTE-FDS--
: .. :: ...::. .: :::. : :
XP_011 AVLIFNVHVIDFHNPADVVEIRTLSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSGE
370 380 390 400 410 420
70 80 90 100 110
pF1KB6 --------SLPQ--------NQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGY
: :. . : .::...::.: : :: ::: ::.:.:..: .:..
XP_011 TDAGSHEPSRPHFRGQRHDYGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLAH
430 440 450 460 470 480
120 130 140
pF1KB6 GERGAPPKIPGGATLVFEVELLKIERRTEL
:: :: .::.:.:.:::::.. :
XP_011 GESGARG-VPGSAVLLFEVELVSREDGLPTGYLFVWHKDPPANLFEDMDLNKDGEVPPEE
490 500 510 520 530 540
>>NP_851939 (OMIM: 607062) peptidyl-prolyl cis-trans iso (222 aa)
initn: 281 init1: 153 opt: 329 Z-score: 435.6 bits: 87.1 E(85289): 1.6e-17
Smith-Waterman score: 329; 47.0% identity (70.1% similar) in 117 aa overlap (26-138:30-146)
10 20 30 40 50
pF1KB6 MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHY
:. ....: : .: ..: :.:::.:. ::
NP_851 MPKTMHFLFRFIVFFYLWGLFTAQRQKKEESTEEVKIEVLHRPENCSKTSKKGDLLNAHY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 TGKL-EDGTEFDSSLPQNQ--PFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYG
: : .::..: : ::. : : ::.:::::: : .. :: :::::.::: ..::
NP_851 DGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYG
70 80 90 100 110 120
120 130 140
pF1KB6 ERG-APPKIPGGATLVFEVELLKIERRTEL
..: : ::: :::.::.:: . .
NP_851 KEGYAEGKIPPDATLIFEIELYAVTKGPRSIETFKQIDMDNDRQLSKAEINLYLQREFEK
130 140 150 160 170 180
142 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:45:13 2016 done: Fri Nov 4 23:45:14 2016
Total Scan time: 4.490 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]