Result of FASTA (omim) for
pF1KB6660
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6660, 451 aa
1>>>pF1KB6660 451 - 451 aa - 451 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1514+/-0.000374; mu= 14.2158+/- 0.023
mean_var=89.8333+/-18.292, 0's: 0 Z-trim(114.9): 14 B-trim: 599 in 1/50
Lambda= 0.135318
statistics sampled from 24987 (24998) to 24987 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.293), width: 16
Scan time: 9.490
The best scores are: opt bits E(85289)
NP_001541 (OMIM: 603502) interferon-related develo ( 451) 2957 587.4 2.6e-167
NP_001007246 (OMIM: 603502) interferon-related dev ( 451) 2957 587.4 2.6e-167
XP_011514444 (OMIM: 603502) PREDICTED: interferon- ( 456) 2937 583.5 3.9e-166
NP_001184008 (OMIM: 603502) interferon-related dev ( 401) 2626 522.7 6.7e-148
NP_001184009 (OMIM: 603502) interferon-related dev ( 401) 2626 522.7 6.7e-148
XP_016867640 (OMIM: 603502) PREDICTED: interferon- ( 401) 2626 522.7 6.7e-148
XP_011514445 (OMIM: 603502) PREDICTED: interferon- ( 406) 2606 518.8 1e-146
NP_006755 (OMIM: 602725) interferon-related develo ( 506) 1433 289.9 1e-77
>>NP_001541 (OMIM: 603502) interferon-related developmen (451 aa)
initn: 2957 init1: 2957 opt: 2957 Z-score: 3124.7 bits: 587.4 E(85289): 2.6e-167
Smith-Waterman score: 2957; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451)
10 20 30 40 50 60
pF1KB6 MPKNKKRNTPHRGSSAGGGGSGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPKNKKRNTPHRGSSAGGGGSGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SSFAEDGPEVLDEEGTQEDLEYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFAEDGPEVLDEEGTQEDLEYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ERRMTLTDSIERCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERRMTLTDSIERCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SASMQARQTCATCFGVCCFIATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SASMQARQTCATCFGVCCFIATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 HISSLLAWTLLLTICPINEVKKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HISSLLAWTLLLTICPINEVKKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 ESDFFYEDMESLTQMLRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESDFFYEDMESLTQMLRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ERMYIDCWVKKHTYDTFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERMYIDCWVKKHTYDTFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRF
370 380 390 400 410 420
430 440 450
pF1KB6 ERHLYNSAAFKARTKARSKCRDKRADVGEFF
:::::::::::::::::::::::::::::::
NP_001 ERHLYNSAAFKARTKARSKCRDKRADVGEFF
430 440 450
>>NP_001007246 (OMIM: 603502) interferon-related develop (451 aa)
initn: 2957 init1: 2957 opt: 2957 Z-score: 3124.7 bits: 587.4 E(85289): 2.6e-167
Smith-Waterman score: 2957; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451)
10 20 30 40 50 60
pF1KB6 MPKNKKRNTPHRGSSAGGGGSGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPKNKKRNTPHRGSSAGGGGSGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SSFAEDGPEVLDEEGTQEDLEYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFAEDGPEVLDEEGTQEDLEYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ERRMTLTDSIERCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERRMTLTDSIERCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SASMQARQTCATCFGVCCFIATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SASMQARQTCATCFGVCCFIATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 HISSLLAWTLLLTICPINEVKKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HISSLLAWTLLLTICPINEVKKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 ESDFFYEDMESLTQMLRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESDFFYEDMESLTQMLRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ERMYIDCWVKKHTYDTFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERMYIDCWVKKHTYDTFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRF
370 380 390 400 410 420
430 440 450
pF1KB6 ERHLYNSAAFKARTKARSKCRDKRADVGEFF
:::::::::::::::::::::::::::::::
NP_001 ERHLYNSAAFKARTKARSKCRDKRADVGEFF
430 440 450
>>XP_011514444 (OMIM: 603502) PREDICTED: interferon-rela (456 aa)
initn: 2084 init1: 1980 opt: 2937 Z-score: 3103.6 bits: 583.5 E(85289): 3.9e-166
Smith-Waterman score: 2937; 98.9% identity (98.9% similar) in 456 aa overlap (1-451:1-456)
10 20 30 40 50 60
pF1KB6 MPKNKKRNTPHRGSSAGGGGSGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPKNKKRNTPHRGSSAGGGGSGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SSFAEDGPEVLDEEGTQEDLEYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSFAEDGPEVLDEEGTQEDLEYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ERRMTLTDSIERCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERRMTLTDSIERCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SASMQARQTCATCFGVCCFIATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SASMQARQTCATCFGVCCFIATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 HISSLLAWTLLLTICPINEVKKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HISSLLAWTLLLTICPINEVKKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGI
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 ES-----DFFYEDMESLTQMLRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTET
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESIFFKKDFFYEDMESLTQMLRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTET
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 IKFGPERMYIDCWVKKHTYDTFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IKFGPERMYIDCWVKKHTYDTFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTM
370 380 390 400 410 420
420 430 440 450
pF1KB6 KISRFERHLYNSAAFKARTKARSKCRDKRADVGEFF
::::::::::::::::::::::::::::::::::::
XP_011 KISRFERHLYNSAAFKARTKARSKCRDKRADVGEFF
430 440 450
>>NP_001184008 (OMIM: 603502) interferon-related develop (401 aa)
initn: 2626 init1: 2626 opt: 2626 Z-score: 2776.3 bits: 522.7 E(85289): 6.7e-148
Smith-Waterman score: 2626; 100.0% identity (100.0% similar) in 401 aa overlap (51-451:1-401)
30 40 50 60 70 80
pF1KB6 SGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDPSSFAEDGPEVLDEEGTQEDL
::::::::::::::::::::::::::::::
NP_001 MSHCSGYSDPSSFAEDGPEVLDEEGTQEDL
10 20 30
90 100 110 120 130 140
pF1KB6 EYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIERCLKKGKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIERCLKKGKSD
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 EQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDGSASMQARQTCATCFGVCCFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDGSASMQARQTCATCFGVCCFI
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 ATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEV
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB6 KKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGIESDFFYEDMESLTQMLRALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGIESDFFYEDMESLTQMLRALA
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB6 TDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGPERMYIDCWVKKHTYDTFKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGPERMYIDCWVKKHTYDTFKEV
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB6 LGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRFERHLYNSAAFKARTKARSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRFERHLYNSAAFKARTKARSKC
340 350 360 370 380 390
450
pF1KB6 RDKRADVGEFF
:::::::::::
NP_001 RDKRADVGEFF
400
>>NP_001184009 (OMIM: 603502) interferon-related develop (401 aa)
initn: 2626 init1: 2626 opt: 2626 Z-score: 2776.3 bits: 522.7 E(85289): 6.7e-148
Smith-Waterman score: 2626; 100.0% identity (100.0% similar) in 401 aa overlap (51-451:1-401)
30 40 50 60 70 80
pF1KB6 SGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDPSSFAEDGPEVLDEEGTQEDL
::::::::::::::::::::::::::::::
NP_001 MSHCSGYSDPSSFAEDGPEVLDEEGTQEDL
10 20 30
90 100 110 120 130 140
pF1KB6 EYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIERCLKKGKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIERCLKKGKSD
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 EQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDGSASMQARQTCATCFGVCCFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDGSASMQARQTCATCFGVCCFI
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 ATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEV
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB6 KKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGIESDFFYEDMESLTQMLRALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGIESDFFYEDMESLTQMLRALA
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB6 TDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGPERMYIDCWVKKHTYDTFKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGPERMYIDCWVKKHTYDTFKEV
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB6 LGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRFERHLYNSAAFKARTKARSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRFERHLYNSAAFKARTKARSKC
340 350 360 370 380 390
450
pF1KB6 RDKRADVGEFF
:::::::::::
NP_001 RDKRADVGEFF
400
>>XP_016867640 (OMIM: 603502) PREDICTED: interferon-rela (401 aa)
initn: 2626 init1: 2626 opt: 2626 Z-score: 2776.3 bits: 522.7 E(85289): 6.7e-148
Smith-Waterman score: 2626; 100.0% identity (100.0% similar) in 401 aa overlap (51-451:1-401)
30 40 50 60 70 80
pF1KB6 SGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDPSSFAEDGPEVLDEEGTQEDL
::::::::::::::::::::::::::::::
XP_016 MSHCSGYSDPSSFAEDGPEVLDEEGTQEDL
10 20 30
90 100 110 120 130 140
pF1KB6 EYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIERCLKKGKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIERCLKKGKSD
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 EQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDGSASMQARQTCATCFGVCCFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDGSASMQARQTCATCFGVCCFI
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 ATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEV
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB6 KKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGIESDFFYEDMESLTQMLRALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGIESDFFYEDMESLTQMLRALA
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB6 TDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGPERMYIDCWVKKHTYDTFKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGPERMYIDCWVKKHTYDTFKEV
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB6 LGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRFERHLYNSAAFKARTKARSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRFERHLYNSAAFKARTKARSKC
340 350 360 370 380 390
450
pF1KB6 RDKRADVGEFF
:::::::::::
XP_016 RDKRADVGEFF
400
>>XP_011514445 (OMIM: 603502) PREDICTED: interferon-rela (406 aa)
initn: 1677 init1: 1649 opt: 2606 Z-score: 2755.1 bits: 518.8 E(85289): 1e-146
Smith-Waterman score: 2606; 98.8% identity (98.8% similar) in 406 aa overlap (51-451:1-406)
30 40 50 60 70 80
pF1KB6 SGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGYSDPSSFAEDGPEVLDEEGTQEDL
::::::::::::::::::::::::::::::
XP_011 MSHCSGYSDPSSFAEDGPEVLDEEGTQEDL
10 20 30
90 100 110 120 130 140
pF1KB6 EYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIERCLKKGKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIERCLKKGKSD
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 EQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDGSASMQARQTCATCFGVCCFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQRAAAALASVLCIQLGPGIESEEILKTLGPILKKIICDGSASMQARQTCATCFGVCCFI
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 ATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEV
160 170 180 190 200 210
270 280 290 300 310
pF1KB6 KKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGIES-----DFFYEDMESLTQM
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::
XP_011 KKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGIESIFFKKDFFYEDMESLTQM
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB6 LRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGPERMYIDCWVKKHTYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGPERMYIDCWVKKHTYD
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB6 TFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRFERHLYNSAAFKARTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRFERHLYNSAAFKARTK
340 350 360 370 380 390
440 450
pF1KB6 ARSKCRDKRADVGEFF
::::::::::::::::
XP_011 ARSKCRDKRADVGEFF
400
>>NP_006755 (OMIM: 602725) interferon-related developmen (506 aa)
initn: 1422 init1: 816 opt: 1433 Z-score: 1516.1 bits: 289.9 E(85289): 1e-77
Smith-Waterman score: 1433; 50.6% identity (78.1% similar) in 453 aa overlap (1-447:65-505)
10 20 30
pF1KB6 MPKNKKRNTPHRGSSAGGGGSGAAAATAAT
::. .: :: ..:.. ::: : ... :
NP_006 SAQRTGRRLVGLEPTPTGSLTPRPPRPVPGMPRARKGNTLRKGGQRRGGG--ARSSAQAD
40 50 60 70 80 90
40 50 60 70 80
pF1KB6 AGGQHRNVQPFSDEDASIE---TMSHCSGYSDPSSFAED--GPEVLDEEGTQEDLEYKLK
.:. ::..:. : : :.: : :. ::: : .:.::.: ::::: :::
NP_006 SGS--------SDDEAASEARSTASECP--SLLSTTAEDSLGGDVVDEQGQQEDLEEKLK
100 110 120 130 140
90 100 110 120 130 140
pF1KB6 GLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIERCLKKGKSDEQRAA
.: ::::::::.:::... ::::..: .:.::::.::.:..:.::::::..:: :
NP_006 EYVDCLTDKSAKTRQGALESLRLALASRLLPDFLLERRLTLADALEKCLKKGKGEEQALA
150 160 170 180 190 200
150 160 170 180 190 200
pF1KB6 AALASVLCIQLGPGIESEEILKTLGPILKKIICDGSASMQARQTCATCFGVCCFIATDDI
::. ..::.::::: ..::....: :.: ... :..:: :: ::. .:. :..:. ::
NP_006 AAVLGLLCVQLGPGPKGEELFHSLQPLLVSVLSDSTASPAARLHCASALGLGCYVAAADI
210 220 230 240 250 260
210 220 230 240 250 260
pF1KB6 TELYSTLECLENIFTKSY-LKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKL
.: : : :::..:.. : : ..:. . . : ..: ::.::::::: ..... :
NP_006 QDLVSCLACLESVFSRFYGLGGSSTSPVVPASLHGLLSAALQAWALLLTICPSTQISHIL
270 280 290 300 310 320
270 280 290 300 310 320
pF1KB6 EMHFHKLPSLLSCDDVNMRIAAGESLALLFELARGIESDFFYEDMESLTQMLRALATDGN
. .. .::.::: ..::.::::::..:::::::: .: .: :::::.: ..::.::::.:
NP_006 DRQLPRLPQLLSSESVNLRIAAGETIALLFELARDLEEEFVYEDMEALCSVLRTLATDSN
330 340 350 360 370 380
330 340 350 360 370 380
pF1KB6 KHRAKVDKRKQRSVFRDVLRAVEERDFPTETIKFGPERMYIDCWVKKHTYDTFKEVLGSG
:.:::.:.:.:::.:: ::..:: . : ..:: : .:.: :.... : .::::::::
NP_006 KYRAKADRRRQRSTFRAVLHSVEGGECEEEIVRFGFEVLYMDSWARHRIYAAFKEVLGSG
390 400 410 420 430 440
390 400 410 420 430 440
pF1KB6 MQYHLQSNEFLRNVFELGPPVMLDAATLKTMKISRFERHLYNSAAFKARTKARSKCRDKR
:..:::.::.::..: ::: ..:::..::. :. :::.::::.:::::::::::. ::::
NP_006 MHHHLQNNELLRDIFGLGPVLLLDATALKACKVPRFEKHLYNAAAFKARTKARSRVRDKR
450 460 470 480 490 500
450
pF1KB6 ADVGEFF
::.
NP_006 ADIL
451 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:18:27 2016 done: Sat Nov 5 11:18:28 2016
Total Scan time: 9.490 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]