Result of FASTA (ccds) for
pF1KB6651
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6651, 420 aa
1>>>pF1KB6651 420 - 420 aa - 420 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1869+/-0.000836; mu= 17.5378+/- 0.050
mean_var=64.0832+/-13.119, 0's: 0 Z-trim(106.8): 61 B-trim: 219 in 2/49
Lambda= 0.160215
statistics sampled from 9282 (9344) to 9282 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.653), E-opt: 0.2 (0.28), width: 16
Scan time: 1.380
The best scores are: opt bits E(33420)
CCDS2559.1 IL5RA gene_id:3568|Hs109|chr3 ( 420) 2824 661.5 4.2e-190
CCDS58813.1 IL5RA gene_id:3568|Hs109|chr3 ( 378) 2445 573.9 9.1e-164
CCDS46739.1 IL5RA gene_id:3568|Hs109|chr3 ( 333) 2230 524.2 7.5e-149
CCDS2560.1 IL5RA gene_id:3568|Hs109|chr3 ( 335) 2230 524.2 7.5e-149
CCDS14565.1 IL13RA2 gene_id:3598|Hs109|chrX ( 380) 369 94.1 2.6e-19
CCDS35191.1 CSF2RA gene_id:1438|Hs109|chrY ( 400) 353 90.4 3.5e-18
CCDS35191.1 CSF2RA gene_id:1438|Hs109|chrX ( 400) 353 90.4 3.5e-18
CCDS55360.1 CSF2RA gene_id:1438|Hs109|chrY ( 410) 353 90.4 3.5e-18
CCDS55360.1 CSF2RA gene_id:1438|Hs109|chrX ( 410) 353 90.4 3.5e-18
CCDS55361.1 CSF2RA gene_id:1438|Hs109|chrY ( 267) 349 89.4 4.7e-18
CCDS55361.1 CSF2RA gene_id:1438|Hs109|chrX ( 267) 349 89.4 4.7e-18
CCDS14113.1 IL3RA gene_id:3563|Hs109|chrX ( 378) 294 76.7 4.2e-14
CCDS14113.1 IL3RA gene_id:3563|Hs109|chrY ( 378) 294 76.7 4.2e-14
CCDS59158.1 IL3RA gene_id:3563|Hs109|chrX ( 300) 289 75.5 7.8e-14
CCDS59158.1 IL3RA gene_id:3563|Hs109|chrY ( 300) 289 75.5 7.8e-14
CCDS35192.1 CSF2RA gene_id:1438|Hs109|chrX ( 333) 289 75.5 8.5e-14
CCDS35192.1 CSF2RA gene_id:1438|Hs109|chrY ( 333) 289 75.5 8.5e-14
CCDS55359.1 CSF2RA gene_id:1438|Hs109|chrX ( 434) 289 75.6 1.1e-13
CCDS55359.1 CSF2RA gene_id:1438|Hs109|chrY ( 434) 289 75.6 1.1e-13
CCDS35190.1 CSF2RA gene_id:1438|Hs109|chrX ( 377) 283 74.2 2.5e-13
CCDS35190.1 CSF2RA gene_id:1438|Hs109|chrY ( 377) 283 74.2 2.5e-13
>>CCDS2559.1 IL5RA gene_id:3568|Hs109|chr3 (420 aa)
initn: 2824 init1: 2824 opt: 2824 Z-score: 3526.6 bits: 661.5 E(33420): 4.2e-190
Smith-Waterman score: 2824; 100.0% identity (100.0% similar) in 420 aa overlap (1-420:1-420)
10 20 30 40 50 60
pF1KB6 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VNLEYQVKINAPKEDDYETRITESKCVTILHKGFSASVRTILQNDHSLLASSWASAELHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 VNLEYQVKINAPKEDDYETRITESKCVTILHKGFSASVRTILQNDHSLLASSWASAELHA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGSWTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 PPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGSWTE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PPLNVTAEIEGTRLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNAFISIIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 PPLNVTAEIEGTRLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNAFISIIDD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGNDEHKPLREWFVIVIMATICFILLILSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 LSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGNDEHKPLREWFVIVIMATICFILLILSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ICKICHLWIKLFPPIPAPKSNIKDLFVTTNYEKAGSSETEIEVICYIEKPGVETLEDSVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 ICKICHLWIKLFPPIPAPKSNIKDLFVTTNYEKAGSSETEIEVICYIEKPGVETLEDSVF
370 380 390 400 410 420
>>CCDS58813.1 IL5RA gene_id:3568|Hs109|chr3 (378 aa)
initn: 2445 init1: 2445 opt: 2445 Z-score: 3053.8 bits: 573.9 E(33420): 9.1e-164
Smith-Waterman score: 2445; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KB6 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VNLEYQVKINAPKEDDYETRITESKCVTILHKGFSASVRTILQNDHSLLASSWASAELHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VNLEYQVKINAPKEDDYETRITESKCVTILHKGFSASVRTILQNDHSLLASSWASAELHA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGSWTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGSWTE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PPLNVTAEIEGTRLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNAFISIIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PPLNVTAEIEGTRLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNAFISIIDD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGNDEHKPLREWFVIVIMATICFILLILSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGNDEHKPLREWFVIVIMATICFILLILSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ICKICHLWIKLFPPIPAPKSNIKDLFVTTNYEKAGSSETEIEVICYIEKPGVETLEDSVF
::::
CCDS58 ICKIKLGPVRRKLKSSVI
370
>>CCDS46739.1 IL5RA gene_id:3568|Hs109|chr3 (333 aa)
initn: 2230 init1: 2230 opt: 2230 Z-score: 2786.1 bits: 524.2 E(33420): 7.5e-149
Smith-Waterman score: 2230; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KB6 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VNLEYQVKINAPKEDDYETRITESKCVTILHKGFSASVRTILQNDHSLLASSWASAELHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VNLEYQVKINAPKEDDYETRITESKCVTILHKGFSASVRTILQNDHSLLASSWASAELHA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGSWTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGSWTE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PPLNVTAEIEGTRLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNAFISIIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PPLNVTAEIEGTRLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNAFISIIDD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGNDEHKPLREWFVIVIMATICFILLILSL
::::::::::::::::::::::::::::::::
CCDS46 LSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGK
310 320 330
370 380 390 400 410 420
pF1KB6 ICKICHLWIKLFPPIPAPKSNIKDLFVTTNYEKAGSSETEIEVICYIEKPGVETLEDSVF
>>CCDS2560.1 IL5RA gene_id:3568|Hs109|chr3 (335 aa)
initn: 2230 init1: 2230 opt: 2230 Z-score: 2786.0 bits: 524.2 E(33420): 7.5e-149
Smith-Waterman score: 2230; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KB6 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VNLEYQVKINAPKEDDYETRITESKCVTILHKGFSASVRTILQNDHSLLASSWASAELHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 VNLEYQVKINAPKEDDYETRITESKCVTILHKGFSASVRTILQNDHSLLASSWASAELHA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGSWTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 PPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGSWTE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PPLNVTAEIEGTRLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNAFISIIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 PPLNVTAEIEGTRLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNAFISIIDD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGNDEHKPLREWFVIVIMATICFILLILSL
::::::::::::::::::::::::::::::::
CCDS25 LSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGFSR
310 320 330
370 380 390 400 410 420
pF1KB6 ICKICHLWIKLFPPIPAPKSNIKDLFVTTNYEKAGSSETEIEVICYIEKPGVETLEDSVF
>>CCDS14565.1 IL13RA2 gene_id:3598|Hs109|chrX (380 aa)
initn: 217 init1: 146 opt: 369 Z-score: 460.5 bits: 94.1 E(33420): 2.6e-19
Smith-Waterman score: 422; 27.2% identity (56.6% similar) in 364 aa overlap (25-373:27-374)
10 20 30 40 50
pF1KB6 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTG-LAQVLLQWKPNPDQE
: .:.. :: .: : : :. . :::.: . .
CCDS14 MAFVCLAIGCLYTFLISTTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 Q-RNVNLEYQVKINAPKEDDYETRITES---KCVTILHKGFSASVRTILQ---NDHSLLA
. .. ..::..: . ..: ::.. : :.::. :...:.: .. : .
CCDS14 HFKECTVEYELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAKIHTLLPWQCTNGSEVQ
70 80 90 100 110 120
120 130 140 150 160
pF1KB6 SSWASAELH-APPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQY
:::: . .: : : :.. .. :. ..: : :.: : . ::.:
CCDS14 SSWAETTYWISPQGIPETKVQDMDCV----------YYNWQY-LLCSWKPGIGVLLDTNY
130 140 150 160
170 180 190 200 210 220
pF1KB6 FLYYRYGSWTE--ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPF
:.: : . . .: .: : :.::.: :: : .:. . :::::... ::
CCDS14 NLFYWYEGLDHALQCVDYIKAD-GQNIGCRFPYLEA-SDYKDFY-ICVNGSSENKPIRSS
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB6 DQLFALHAIDQINPPLNVTAEIEGT-RLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQI
: :. : . ::. .: :.. .....: :.. .: .:::::..:.. . .
CCDS14 YFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTA
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB6 EKLMTNAFISIIDDLSKYDVQVRAAVSSMCREAGLWSEWS-QPIYVGNDEHKP--LREWF
. .. .. . ::. :. .: . :.::::: . . :.: : :: :.
CCDS14 TVENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLSKKTLLRFWL
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB6 VIVIMATICFILLILSLICKICHLWIKLFPPIPAPKSNIKDLFVTTNYEKAGSSETEIEV
. .. . ..... .:. . . . :..:
CCDS14 PFGFI--LILVIFVTGLLLRKPNTYPKMIPEFFCDT
350 360 370 380
>>CCDS35191.1 CSF2RA gene_id:1438|Hs109|chrY (400 aa)
initn: 284 init1: 107 opt: 353 Z-score: 440.2 bits: 90.4 E(33420): 3.5e-18
Smith-Waterman score: 355; 27.2% identity (56.8% similar) in 324 aa overlap (78-384:71-368)
50 60 70 80 90 100
pF1KB6 LQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRITESKCVTI-----LHKGFSASVRTIL
: :.....: ::.: . :..
CCDS35 DSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNT
50 60 70 80 90 100
110 120 130 140 150 160
pF1KB6 QNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTD
.. .. . :. : ::. :..: ... ..::: :
CCDS35 SQ------RGFQQKLLYPNSGREGTAAQNFSCFIYNAD-----------LMNCTWARGPT
110 120 130 140
170 180 190 200 210 220
pF1KB6 APEDTQYFLYYRYGSWTEE--CQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSK
::.:.::::: : .. .: : : .:. : ...: . :.. :... ::::.:.
CCDS35 APRDVQYFLYIRNSKRRREIRCPYYIQDS-GTHVGCHLDNLSGLTS-RNYF--LVNGTSR
150 160 170 180 190
230 240 250 260 270
pF1KB6 HSAIRPFDQLFALHAIDQINPPLNVTAEIEGTRLSIQWEKPVSAFPIHCFD--YEVKIH-
. .:. ::.:. . :...::: :::.. . :. ..:..: . . .: :.. .:
CCDS35 EIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHR
200 210 220 230 240 250
280 290 300 310 320 330
pF1KB6 -NTRNGYLQIEKLMTNAFISIIDDLSKYDVQVRAAVSSMCREAGL----WSEWSQPIYVG
::. : :.:. :. .. . . . . :: : : : . :: ::. : :
CCDS35 KNTQPG---TENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFG
260 270 280 290 300 310
340 350 360 370 380 390
pF1KB6 NDEHKPLREW-FVIVIMAT-ICFILLILSLICKICHLWIKLFPPIPAPKSNIKDLFVTTN
.:. . . .:..:..: .: : .:... : .::::.: :....:
CCDS35 SDDGNLGSVYIYVLLIVGTLVCGI--VLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVED
320 330 340 350 360 370
400 410 420
pF1KB6 YEKAGSSETEIEVICYIEKPGVETLEDSVF
CCDS35 EIIWEEFTPEEGKGYREEVLTVKEIT
380 390 400
>>CCDS35191.1 CSF2RA gene_id:1438|Hs109|chrX (400 aa)
initn: 284 init1: 107 opt: 353 Z-score: 440.2 bits: 90.4 E(33420): 3.5e-18
Smith-Waterman score: 355; 27.2% identity (56.8% similar) in 324 aa overlap (78-384:71-368)
50 60 70 80 90 100
pF1KB6 LQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRITESKCVTI-----LHKGFSASVRTIL
: :.....: ::.: . :..
CCDS35 DSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNT
50 60 70 80 90 100
110 120 130 140 150 160
pF1KB6 QNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTD
.. .. . :. : ::. :..: ... ..::: :
CCDS35 SQ------RGFQQKLLYPNSGREGTAAQNFSCFIYNAD-----------LMNCTWARGPT
110 120 130 140
170 180 190 200 210 220
pF1KB6 APEDTQYFLYYRYGSWTEE--CQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSK
::.:.::::: : .. .: : : .:. : ...: . :.. :... ::::.:.
CCDS35 APRDVQYFLYIRNSKRRREIRCPYYIQDS-GTHVGCHLDNLSGLTS-RNYF--LVNGTSR
150 160 170 180 190
230 240 250 260 270
pF1KB6 HSAIRPFDQLFALHAIDQINPPLNVTAEIEGTRLSIQWEKPVSAFPIHCFD--YEVKIH-
. .:. ::.:. . :...::: :::.. . :. ..:..: . . .: :.. .:
CCDS35 EIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHR
200 210 220 230 240 250
280 290 300 310 320 330
pF1KB6 -NTRNGYLQIEKLMTNAFISIIDDLSKYDVQVRAAVSSMCREAGL----WSEWSQPIYVG
::. : :.:. :. .. . . . . :: : : : . :: ::. : :
CCDS35 KNTQPG---TENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFG
260 270 280 290 300 310
340 350 360 370 380 390
pF1KB6 NDEHKPLREW-FVIVIMAT-ICFILLILSLICKICHLWIKLFPPIPAPKSNIKDLFVTTN
.:. . . .:..:..: .: : .:... : .::::.: :....:
CCDS35 SDDGNLGSVYIYVLLIVGTLVCGI--VLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVED
320 330 340 350 360 370
400 410 420
pF1KB6 YEKAGSSETEIEVICYIEKPGVETLEDSVF
CCDS35 EIIWEEFTPEEGKGYREEVLTVKEIT
380 390 400
>>CCDS55360.1 CSF2RA gene_id:1438|Hs109|chrY (410 aa)
initn: 284 init1: 107 opt: 353 Z-score: 440.0 bits: 90.4 E(33420): 3.5e-18
Smith-Waterman score: 355; 27.2% identity (56.8% similar) in 324 aa overlap (78-384:71-368)
50 60 70 80 90 100
pF1KB6 LQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRITESKCVTI-----LHKGFSASVRTIL
: :.....: ::.: . :..
CCDS55 DSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNT
50 60 70 80 90 100
110 120 130 140 150 160
pF1KB6 QNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTD
.. .. . :. : ::. :..: ... ..::: :
CCDS55 SQ------RGFQQKLLYPNSGREGTAAQNFSCFIYNAD-----------LMNCTWARGPT
110 120 130 140
170 180 190 200 210 220
pF1KB6 APEDTQYFLYYRYGSWTEE--CQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSK
::.:.::::: : .. .: : : .:. : ...: . :.. :... ::::.:.
CCDS55 APRDVQYFLYIRNSKRRREIRCPYYIQDS-GTHVGCHLDNLSGLTS-RNYF--LVNGTSR
150 160 170 180 190
230 240 250 260 270
pF1KB6 HSAIRPFDQLFALHAIDQINPPLNVTAEIEGTRLSIQWEKPVSAFPIHCFD--YEVKIH-
. .:. ::.:. . :...::: :::.. . :. ..:..: . . .: :.. .:
CCDS55 EIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHR
200 210 220 230 240 250
280 290 300 310 320 330
pF1KB6 -NTRNGYLQIEKLMTNAFISIIDDLSKYDVQVRAAVSSMCREAGL----WSEWSQPIYVG
::. : :.:. :. .. . . . . :: : : : . :: ::. : :
CCDS55 KNTQPG---TENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFG
260 270 280 290 300 310
340 350 360 370 380 390
pF1KB6 NDEHKPLREW-FVIVIMAT-ICFILLILSLICKICHLWIKLFPPIPAPKSNIKDLFVTTN
.:. . . .:..:..: .: : .:... : .::::.: :....:
CCDS55 SDDGNLGSVYIYVLLIVGTLVCGI--VLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVED
320 330 340 350 360 370
400 410 420
pF1KB6 YEKAGSSETEIEVICYIEKPGVETLEDSVF
CCDS55 EMGPQRHHRCGWNLYPTPGPSPGSGSSPRLGSESSL
380 390 400 410
>>CCDS55360.1 CSF2RA gene_id:1438|Hs109|chrX (410 aa)
initn: 284 init1: 107 opt: 353 Z-score: 440.0 bits: 90.4 E(33420): 3.5e-18
Smith-Waterman score: 355; 27.2% identity (56.8% similar) in 324 aa overlap (78-384:71-368)
50 60 70 80 90 100
pF1KB6 LQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRITESKCVTI-----LHKGFSASVRTIL
: :.....: ::.: . :..
CCDS55 DSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNT
50 60 70 80 90 100
110 120 130 140 150 160
pF1KB6 QNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTD
.. .. . :. : ::. :..: ... ..::: :
CCDS55 SQ------RGFQQKLLYPNSGREGTAAQNFSCFIYNAD-----------LMNCTWARGPT
110 120 130 140
170 180 190 200 210 220
pF1KB6 APEDTQYFLYYRYGSWTEE--CQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSK
::.:.::::: : .. .: : : .:. : ...: . :.. :... ::::.:.
CCDS55 APRDVQYFLYIRNSKRRREIRCPYYIQDS-GTHVGCHLDNLSGLTS-RNYF--LVNGTSR
150 160 170 180 190
230 240 250 260 270
pF1KB6 HSAIRPFDQLFALHAIDQINPPLNVTAEIEGTRLSIQWEKPVSAFPIHCFD--YEVKIH-
. .:. ::.:. . :...::: :::.. . :. ..:..: . . .: :.. .:
CCDS55 EIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHR
200 210 220 230 240 250
280 290 300 310 320 330
pF1KB6 -NTRNGYLQIEKLMTNAFISIIDDLSKYDVQVRAAVSSMCREAGL----WSEWSQPIYVG
::. : :.:. :. .. . . . . :: : : : . :: ::. : :
CCDS55 KNTQPG---TENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFG
260 270 280 290 300 310
340 350 360 370 380 390
pF1KB6 NDEHKPLREW-FVIVIMAT-ICFILLILSLICKICHLWIKLFPPIPAPKSNIKDLFVTTN
.:. . . .:..:..: .: : .:... : .::::.: :....:
CCDS55 SDDGNLGSVYIYVLLIVGTLVCGI--VLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVED
320 330 340 350 360 370
400 410 420
pF1KB6 YEKAGSSETEIEVICYIEKPGVETLEDSVF
CCDS55 EMGPQRHHRCGWNLYPTPGPSPGSGSSPRLGSESSL
380 390 400 410
>>CCDS55361.1 CSF2RA gene_id:1438|Hs109|chrY (267 aa)
initn: 284 init1: 107 opt: 349 Z-score: 437.8 bits: 89.4 E(33420): 4.7e-18
Smith-Waterman score: 349; 30.7% identity (61.5% similar) in 244 aa overlap (153-384:1-235)
130 140 150 160 170 180
pF1KB6 GSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGSWTEE-
..::: : ::.:.::::: : .. .:
CCDS55 MNCTWARGPTAPRDVQYFLYIRNSKRRREI
10 20 30
190 200 210 220 230 240
pF1KB6 -CQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN
: : .:. : ...: . :.. :... ::::.:.. .:. ::.:. . :...:
CCDS55 RCPYYIQDS-GTHVGCHLDNLSGLTS-RNYF--LVNGTSREIGIQFFDSLLDTKKIERFN
40 50 60 70 80
250 260 270 280 290
pF1KB6 PPLNVTAEIEGTRLSIQWEKPVSAFPIHCFD--YEVKIH--NTRNGYLQIEKLMTNAFIS
:: :::.. . :. ..:..: . . .: :.. .: ::. : :.:. :. .
CCDS55 PPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPG---TENLLINVSGD
90 100 110 120 130 140
300 310 320 330 340 350
pF1KB6 IIDDLSKYDVQVRAAVSSMCREAGL----WSEWSQPIYVGNDEHKPLREW-FVIVIMAT-
. . . . . :: : : : . :: ::. : :.:. . . .:..:..:
CCDS55 LENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTL
150 160 170 180 190 200
360 370 380 390 400 410
pF1KB6 ICFILLILSLICKICHLWIKLFPPIPAPKSNIKDLFVTTNYEKAGSSETEIEVICYIEKP
.: : .:... : .::::.: :....:
CCDS55 VCGI--VLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVL
210 220 230 240 250 260
420
pF1KB6 GVETLEDSVF
CCDS55 TVKEIT
420 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:38:47 2019 done: Thu Oct 24 21:38:48 2019
Total Scan time: 1.380 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]