Result of FASTA (ccds) for
pF1KB6650
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6650, 446 aa
1>>>pF1KB6650 446 - 446 aa - 446 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.7013+/-0.00137; mu= -16.2660+/- 0.081
mean_var=447.6417+/-94.281, 0's: 0 Z-trim(110.1): 23 B-trim: 108 in 1/52
Lambda= 0.060619
statistics sampled from 11337 (11350) to 11337 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.349), width: 16
Scan time: 2.950
The best scores are: opt bits E(32554)
CCDS11538.1 CALCOCO2 gene_id:10241|Hs108|chr17 ( 446) 3011 277.9 1.4e-74
CCDS58559.1 CALCOCO2 gene_id:10241|Hs108|chr17 ( 470) 2582 240.4 2.9e-63
CCDS58558.1 CALCOCO2 gene_id:10241|Hs108|chr17 ( 467) 2581 240.3 3e-63
CCDS58561.1 CALCOCO2 gene_id:10241|Hs108|chr17 ( 374) 2494 232.7 5e-61
CCDS58560.1 CALCOCO2 gene_id:10241|Hs108|chr17 ( 404) 1769 169.3 6.5e-42
>>CCDS11538.1 CALCOCO2 gene_id:10241|Hs108|chr17 (446 aa)
initn: 3011 init1: 3011 opt: 3011 Z-score: 1452.4 bits: 277.9 E(32554): 1.4e-74
Smith-Waterman score: 3011; 100.0% identity (100.0% similar) in 446 aa overlap (1-446:1-446)
10 20 30 40 50 60
pF1KB6 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 IPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDSCISLQKQNSDMQAELQKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDSCISLQKQNSDMQAELQKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 QEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKLEQTVEQMKQNETTAMKKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKLEQTVEQMKQNETTAMKKQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 PTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCF
370 380 390 400 410 420
430 440
pF1KB6 NCPICDKIFPATEKQIFEDHVFCHSL
::::::::::::::::::::::::::
CCDS11 NCPICDKIFPATEKQIFEDHVFCHSL
430 440
>>CCDS58559.1 CALCOCO2 gene_id:10241|Hs108|chr17 (470 aa)
initn: 2582 init1: 2582 opt: 2582 Z-score: 1249.3 bits: 240.4 E(32554): 2.9e-63
Smith-Waterman score: 2953; 94.9% identity (94.9% similar) in 470 aa overlap (1-446:1-470)
10 20 30 40 50 60
pF1KB6 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
10 20 30 40 50 60
70 80 90
pF1KB6 ------------------------VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAY
::::::::::::::::::::::::::::::::::::
CCDS58 AFKCFQDKLEQELLKWRSQGQKLQVGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAY
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 YLPKDDEYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YLPKDDEYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKEN
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 QELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQN
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 QKMSSENEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QKMSSENEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQR
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 KDQKKLEQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGEND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KDQKKLEQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGEND
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB6 LLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKK
370 380 390 400 410 420
400 410 420 430 440
pF1KB6 CPICKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CPICKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
430 440 450 460 470
>>CCDS58558.1 CALCOCO2 gene_id:10241|Hs108|chr17 (467 aa)
initn: 2581 init1: 2581 opt: 2581 Z-score: 1248.9 bits: 240.3 E(32554): 3e-63
Smith-Waterman score: 2959; 95.5% identity (95.5% similar) in 467 aa overlap (1-446:1-467)
10 20 30 40 50 60
pF1KB6 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
10 20 30 40 50 60
70 80 90
pF1KB6 ---------------------VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLP
:::::::::::::::::::::::::::::::::::::::
CCDS58 CSLNQTIQLLITPDTGSIWHQVGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLP
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 KDDEYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KDDEYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQEL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 KDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKM
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 SSENEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SSENEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQ
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 KKLEQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KKLEQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLK
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB6 RENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPI
370 380 390 400 410 420
400 410 420 430 440
pF1KB6 CKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
430 440 450 460
>>CCDS58561.1 CALCOCO2 gene_id:10241|Hs108|chr17 (374 aa)
initn: 2494 init1: 2494 opt: 2494 Z-score: 1209.1 bits: 232.7 E(32554): 5e-61
Smith-Waterman score: 2494; 100.0% identity (100.0% similar) in 374 aa overlap (73-446:1-374)
50 60 70 80 90 100
pF1KB6 TFTQHFIPRRKDWIGIFRVGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDD
::::::::::::::::::::::::::::::
CCDS58 MWVTLPIDLNNKSAKQQEVQFKAYYLPKDD
10 20 30
110 120 130 140 150 160
pF1KB6 EYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDS
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB6 CISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSE
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB6 NEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKL
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB6 EQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKREN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKREN
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB6 SRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKA
280 290 300 310 320 330
410 420 430 440
pF1KB6 DDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
340 350 360 370
>>CCDS58560.1 CALCOCO2 gene_id:10241|Hs108|chr17 (404 aa)
initn: 1767 init1: 1767 opt: 1769 Z-score: 866.0 bits: 169.3 E(32554): 6.5e-42
Smith-Waterman score: 2641; 90.6% identity (90.6% similar) in 446 aa overlap (1-446:1-404)
10 20 30 40 50 60
pF1KB6 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 IPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDSCISLQKQNSDMQAELQKK
:::::::::::::::::::
CCDS58 IPFQFRPENEEDILVVTTQ-----------------------------------------
130
190 200 210 220 230 240
pF1KB6 QEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 -EELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQ
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB6 EKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKLEQTVEQMKQNETTAMKKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKLEQTVEQMKQNETTAMKKQ
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB6 QELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQV
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB6 PTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCF
320 330 340 350 360 370
430 440
pF1KB6 NCPICDKIFPATEKQIFEDHVFCHSL
::::::::::::::::::::::::::
CCDS58 NCPICDKIFPATEKQIFEDHVFCHSL
380 390 400
446 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:16:04 2016 done: Sat Nov 5 11:16:04 2016
Total Scan time: 2.950 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]