Result of FASTA (ccds) for
pF1KB6559
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6559, 373 aa
1>>>pF1KB6559 373 - 373 aa - 373 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.6295+/-0.00099; mu= -7.9667+/- 0.060
mean_var=479.4105+/-98.163, 0's: 0 Z-trim(118.0): 76 B-trim: 190 in 1/52
Lambda= 0.058576
statistics sampled from 18748 (18824) to 18748 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.838), E-opt: 0.2 (0.578), width: 16
Scan time: 2.420
The best scores are: opt bits E(32554)
CCDS163.1 FBLIM1 gene_id:54751|Hs108|chr1 ( 373) 2735 244.7 9.9e-65
CCDS44064.1 FBLIM1 gene_id:54751|Hs108|chr1 ( 374) 2154 195.6 6e-50
CCDS30609.1 FBLIM1 gene_id:54751|Hs108|chr1 ( 276) 1487 139.1 4.5e-33
CCDS5883.1 ZYX gene_id:7791|Hs108|chr7 ( 572) 794 80.9 3.2e-15
CCDS5708.1 TRIP6 gene_id:7205|Hs108|chr7 ( 476) 720 74.5 2.1e-13
CCDS3291.1 LPP gene_id:4026|Hs108|chr3 ( 612) 695 72.5 1.1e-12
CCDS2729.1 LIMD1 gene_id:8994|Hs108|chr3 ( 676) 661 69.7 8.6e-12
CCDS9581.1 AJUBA gene_id:84962|Hs108|chr14 ( 538) 622 66.3 7.2e-11
CCDS59375.1 WTIP gene_id:126374|Hs108|chr19 ( 430) 617 65.8 8.3e-11
>>CCDS163.1 FBLIM1 gene_id:54751|Hs108|chr1 (373 aa)
initn: 2735 init1: 2735 opt: 2735 Z-score: 1275.6 bits: 244.7 E(32554): 9.9e-65
Smith-Waterman score: 2735; 99.7% identity (99.7% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KB6 MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 SPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSEEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 APAPMGASLIADLEQLHLSPPPPPPQAPAEGPSVQPGPLRPMEEELPPPPAEPVEKGAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 APAPMGASLIADLEQLHLSPPPPPPQAPAEGPSVQPGPLRPMEEELPPPPAEPVEKGAST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTL
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 DICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 ERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNHLFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 PVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNHLFC
310 320 330 340 350 360
370
pF1KB6 KPCHVKRSAAGCC
:::::::::::::
CCDS16 KPCHVKRSAAGCC
370
>>CCDS44064.1 FBLIM1 gene_id:54751|Hs108|chr1 (374 aa)
initn: 2146 init1: 2146 opt: 2154 Z-score: 1010.2 bits: 195.6 E(32554): 6e-50
Smith-Waterman score: 2154; 97.7% identity (98.4% similar) in 304 aa overlap (1-304:1-304)
10 20 30 40 50 60
pF1KB6 MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSEEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 APAPMGASLIADLEQLHLSPPPPPPQAPAEGPSVQPGPLRPMEEELPPPPAEPVEKGAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 APAPMGASLIADLEQLHLSPPPPPPQAPAEGPSVQPGPLRPMEEELPPPPAEPVEKGAST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTL
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRYEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNHLFC
.:.
CCDS44 GLCTGWGAGTGRDPSRVKELSLSPGCWARVSCLLVYYKEYYRAGLGAVAHACNPSTLGGR
310 320 330 340 350 360
>>CCDS30609.1 FBLIM1 gene_id:54751|Hs108|chr1 (276 aa)
initn: 2001 init1: 1449 opt: 1487 Z-score: 707.2 bits: 139.1 E(32554): 4.5e-33
Smith-Waterman score: 1811; 73.7% identity (73.7% similar) in 373 aa overlap (1-373:1-276)
10 20 30 40 50 60
pF1KB6 MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSEEE
:::::::::::::::::::::::
CCDS30 SPWTTPGRAAATVPAAPMQLFNG-------------------------------------
70 80
130 140 150 160 170 180
pF1KB6 APAPMGASLIADLEQLHLSPPPPPPQAPAEGPSVQPGPLRPMEEELPPPPAEPVEKGAST
CCDS30 ------------------------------------------------------------
190 200 210 220 230 240
pF1KB6 DICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTL
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 DICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTL
90 100 110 120 130 140
250 260 270 280 290 300
pF1KB6 ERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 ERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFA
150 160 170 180 190 200
310 320 330 340 350 360
pF1KB6 PVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNHLFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 PVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNHLFC
210 220 230 240 250 260
370
pF1KB6 KPCHVKRSAAGCC
:::::::::::::
CCDS30 KPCHVKRSAAGCC
270
>>CCDS5883.1 ZYX gene_id:7791|Hs108|chr7 (572 aa)
initn: 1020 init1: 518 opt: 794 Z-score: 386.8 bits: 80.9 E(32554): 3.2e-15
Smith-Waterman score: 815; 36.7% identity (61.9% similar) in 341 aa overlap (39-368:253-570)
10 20 30 40 50 60
pF1KB6 VASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRPSPWTTPGR
:: : .::: .:. . . .: ::
CCDS58 HVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGPPASSPAP--APKFSPV---TPKFTP-V
230 240 250 260 270
70 80 90 100 110 120
pF1KB6 AAATVPAAPMQLFNGGCPPPPPVLDGEDVLPD-LDLLPPPPPPPPVLLPSEEEAPAPMGA
:. :.:: :: : :. :. :. : :: ...: : .
CCDS58 ASKFSPGAP-----GGSGSQPNQKLGH---PEALSAGTGSPQPPSFTYAQQREKPRVQ--
280 290 300 310 320
130 140 150 160 170
pF1KB6 SLIADLEQLHLSPPPPPPQAPAEGPSVQPGPL--RPMEE------ELPPPPAEPVEKG-A
:. : ::: : ...:.. :::: . .:: .: .: ... :
CCDS58 ------EKQHPVPPPAQNQNQVRSPGA-PGPLTLKEVEELEQLTQQLMQDMEHPQRQNVA
330 340 350 360 370
180 190 200 210 220 230
pF1KB6 STDICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQD
...:. ::. . . ::.:. . .: ::::. : .:: ::.::. .: : :: :: :
CCDS58 VNELCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQLQGQQFYSLEGAPYCEGCYTD
380 390 400 410 420 430
240 250 260 270 280 290
pF1KB6 TLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRK
:::.:. ::: . :...:: :.:.:: :::::.::: . :: . . :. .:. :....
CCDS58 TLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDYHKQ
440 450 460 470 480 490
300 310 320 330 340 350
pF1KB6 FAPVCSICENPIIPRDGKD-AFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNH
.:: ::.: .::.:. :.: . .. . .::: .::.:::: ::.: :.::.::..:
CCDS58 YAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPLDGH
500 510 520 530 540 550
360 370
pF1KB6 LFCKPCHVKRSAAGCC
..:. ::. :.
CCDS58 VLCRKCHTARAQT
560 570
>>CCDS5708.1 TRIP6 gene_id:7205|Hs108|chr7 (476 aa)
initn: 698 init1: 465 opt: 720 Z-score: 354.0 bits: 74.5 E(32554): 2.1e-13
Smith-Waterman score: 720; 35.9% identity (59.3% similar) in 337 aa overlap (46-367:138-464)
20 30 40 50 60 70
pF1KB6 TLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRPSPWTTPGRAAATVPA
: : . :. : :.: . .. . ::
CCDS57 NGGRGHASRRPDRQAYEPPPPPAYRTGSLKPNPASPLPASPYGGPTPASYTTASTPAGPA
110 120 130 140 150 160
80 90 100 110 120
pF1KB6 APMQLFNG----GCPPPP-PVLDGEDVLPDLDLLPPPPPPPPVLLPS--EEEAPAPMGAS
:.:. . :: :: . .. :: . : : : :. .. :.: ::.
CCDS57 FPVQVKVAQPVRGCGPPRRGASQASGPLPGPHF--PLPGRGEVWGPGYRSQREPGP-GAK
170 180 190 200 210 220
130 140 150 160 170 180
pF1KB6 LIADLEQLHLSPPPPPPQAPAEGPSVQPGPL-RPMEEELPPPPAEPVE------KGASTD
: .: : .. .::.: :: .: :.:: . :. .:
CCDS57 E----EAAGVSGPAGRGRGGEHGPQV---PLSQPPEDELDRLTKKLVHDMNHPPSGEYFG
230 240 250 260 270
190 200 210 220 230 240
pF1KB6 ICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTLE
:. : . : .: :. : .:. ::.: ::: :: :: :: . : :: :: :::
CCDS57 QCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCEGCYVATLE
280 290 300 310 320 330
250 260 270 280 290 300
pF1KB6 RCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFAP
.:. :.. . :.:.::.:.:.::.:::::.: : . :.. . ....:..::.:::::
CCDS57 KCATCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAP
340 350 360 370 380 390
310 320 330 340 350 360
pF1KB6 VCSICENPIIPRDGKD-AFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNHLFC
::.: . :.:. :.. . .: . :.:: .::.::.: .::: : ::::::..:..:
CCDS57 RCSVCGGAIMPEPGQEETVRIVALDRSFHIGCYKCEECGLLLSSEGECQGCYPLDGHILC
400 410 420 430 440 450
370
pF1KB6 KPCHVKRSAAGCC
: : . :
CCDS57 KACSAWRIQELSATVTTDC
460 470
>>CCDS3291.1 LPP gene_id:4026|Hs108|chr3 (612 aa)
initn: 754 init1: 518 opt: 695 Z-score: 341.2 bits: 72.5 E(32554): 1.1e-12
Smith-Waterman score: 705; 35.5% identity (54.9% similar) in 346 aa overlap (46-367:277-600)
20 30 40 50 60 70
pF1KB6 TLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRPSPWTTPGRAAATVPA
: : :: : . :. :: :
CCDS32 GPQGYNTQPVPVSGQCPPPSTRGGMDYAYIPPPGLQPEPGYGYAPN----QGRYYEGYYA
250 260 270 280 290 300
80 90 100 110 120
pF1KB6 APMQLFNGGCPPPPPVLDGEDVLPDL-DLLPPPPPP------PPVLLPSEEEAPAPMGAS
: :: :. :.. :. : :: :: . : . .: .
CCDS32 AGPGY--GGRNDSDPTY-GQQGHPNTWKREPGYTPPGAGNQNPPGMYP----VTGPK-KT
310 320 330 340 350
130 140 150 160 170
pF1KB6 LIADLEQLHLSPPPPPPQAPAEGPSVQPGP------LRPMEE----------ELPPPPAE
:.: .: : :: : : : : :: .:: .: .. :::.
CCDS32 YITD----PVSAPCAPPLQPKGGHSGQLGPSSVAPSFRPEDELEHLTKKMLYDMENPPAD
360 370 380 390 400 410
180 190 200 210 220 230
pF1KB6 PVEKGASTDICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLC
: :: : ..: . . :: . .:..:::: : .: :: :: . . :
CCDS32 EYF-GR----CARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYC
420 430 440 450 460
240 250 260 270 280 290
pF1KB6 EPCYQDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCL
:::: .:::.:. :.. . ..:.:: :.:.:: ::::: : : . :.. . . ..:.
CCDS32 EPCYINTLEQCNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCI
470 480 490 500 510 520
300 310 320 330 340 350
pF1KB6 DDFYRKFAPVCSICENPIIPRDGKD-AFKIECMGRNFHENCYRCEDCRILLSVEPTDQGC
.::..:::: ::.:..::.: :.. . .: . :.:: .::::::: ::: : .:::
CCDS32 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLS-EGDNQGC
530 540 550 560 570 580
360 370
pF1KB6 YPLNNHLFCKPCHVKRSAAGCC
:::..:..:: :. :
CCDS32 YPLDGHILCKTCNSARIRVLTAKASTDL
590 600 610
>>CCDS2729.1 LIMD1 gene_id:8994|Hs108|chr3 (676 aa)
initn: 549 init1: 359 opt: 661 Z-score: 325.2 bits: 69.7 E(32554): 8.6e-12
Smith-Waterman score: 701; 35.3% identity (57.5% similar) in 334 aa overlap (60-367:333-661)
30 40 50 60 70 80
pF1KB6 VRQAVCEARRGRPWEAPAPMKTPEAGLAGRPSPWTTPG---RAAATVPAAPMQLFNGGCP
:.:: : ....:.. ..:.
CCDS27 LSCPRQGGLPRSNSGLGGEVSGVMSKPNVDPQPWFQDGPKSYLSSSAPSSSPAGLDGSQQ
310 320 330 340 350 360
90 100 110 120 130 140
pF1KB6 PPPPVLDGEDVLPDLDLLPPPPPPP---PVL--LPSEEEAPAPMGASLIADLEQLHL-SP
: : . :: : : ::. :: .:.: : ..: .. : ::
CCDS27 GAVPGLGPKPGCTDLGTGPKLSPTSLVHPVMSTLPELSCKEGPLGWSSDGSLGSVLLDSP
370 380 390 400 410 420
150 160 170 180
pF1KB6 PPPPPQAPAEGPSVQPGP-LRPMEEELP----------PPPAEPVEKGASTDICAFCHKT
: . : . : : ::: ::: :: :.: :. :. : :
CCDS27 SSPRVRLPCQ-PLV-PGPELRPSAAELKLEALTQRLEREMDAHP--KADYFGACVKCSKG
430 440 450 460 470
190 200 210 220 230 240
pF1KB6 VFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEP-----CYQDTLERCG
:: : .:: :: :::: .: :.: :..:: .:. .:: .:.. .::
CCDS27 VFGAGQACQAMGNLYHDTCFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCF
480 490 500 510 520 530
250 260 270 280 290 300
pF1KB6 KCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFAPVCS
::... : :..:::...::.:: :: : .:. :.. :.:..::. :... .:: :.
CCDS27 LCGHLIMDMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCA
540 550 560 570 580 590
310 320 330 340 350 360
pF1KB6 ICENPIIPRDGKD-AFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNHLFCKPC
: ::.: .:.: .... : :..: .::.:::: . :. : . ::::..::::. :
CCDS27 ACGLPILPPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHR-CYPLEDHLFCHSC
600 610 620 630 640 650
370
pF1KB6 HVKRSAAGCC
::::
CCDS27 HVKRLEKRPSSTALHQHHF
660 670
>>CCDS9581.1 AJUBA gene_id:84962|Hs108|chr14 (538 aa)
initn: 538 init1: 299 opt: 622 Z-score: 308.6 bits: 66.3 E(32554): 7.2e-11
Smith-Waterman score: 643; 31.1% identity (55.9% similar) in 370 aa overlap (36-370:170-530)
10 20 30 40 50 60
pF1KB6 EKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRPSPWTT
. :.: : : . : ::: :. ..
CCDS95 GSLLLDGAGAGGAGGSRPCSNRTSGISMGYDQRHGSPLPAGPCLFGPP--LAGAPAGYS-
140 150 160 170 180 190
70 80 90 100 110
pF1KB6 PGRAAATVP---AAPMQLFNG-----GCPPP----PPVLDGEDVLPDLDLLPPPPPPPPV
:: . .. : :: .:. :: ::.: . .: . :
CCDS95 PGGVPSAYPELHAALDRLYAQRPAGFGCQESRHSYPPALGSPGALAGAGVGAAGPLERRG
200 210 220 230 240 250
120 130 140 150 160
pF1KB6 LLPSEEEAPA----PMGASLIADLEQL-HLSPPPPPPQAPAEGPSVQPGPLRPMEEELPP
:... . . .:: .: : .:. .: :.: .:. ..: : ::
CCDS95 AQPGRHSVTGYGDCAVGARYQDELTALLRLTVGTGGREAGARG---EPSGIEPSGLEEPP
260 270 280 290 300 310
170 180 190 200 210
pF1KB6 PPAEPV-------EKGASTDI---CAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQL
: : : : : : :.: .. . : .:. ::.:::.: .: : :
CCDS95 GPFVPEAARARMREPEAREDYFGTCIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTL
320 330 340 350 360 370
220 230 240 250 260 270
pF1KB6 AGQSFYQKDGRPLCEPCY-----QDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCA
..::. .: :: : :.. :.: ::... ..:..:.:...::.:: :..:
CCDS95 RCKAFYSVNGSVYCEEDYLFSGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCN
380 390 400 410 420 430
280 290 300 310 320 330
pF1KB6 RCIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDG-KDAFKIECMGRNFHENC
.:. :.. .:.:::. :.....:: :. : .::.: .: .: .. : :..: .:
CCDS95 KCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYHFEC
440 450 460 470 480 490
340 350 360 370
pF1KB6 YRCEDCRILLSVEPTDQGC--YPLNNHLFCKPCHVKRSAAGCC
:.:::::. :: : .:: .::..::.:. ::..: :
CCDS95 YHCEDCRMQLSDE---EGCCCFPLDGHLLCHGCHMQRLNARQPPANYI
500 510 520 530
>>CCDS59375.1 WTIP gene_id:126374|Hs108|chr19 (430 aa)
initn: 568 init1: 293 opt: 617 Z-score: 307.5 bits: 65.8 E(32554): 8.3e-11
Smith-Waterman score: 629; 32.8% identity (58.0% similar) in 305 aa overlap (86-371:132-418)
60 70 80 90 100
pF1KB6 LAGRPSPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDL----------DLLP
: :: : .... . .: :.::
CCDS59 GGSARSSGISLGYDQRHGSPRSGRSDPRPGPGPPSVGSARSSVSSLGSRGSAGAYADFLP
110 120 130 140 150 160
110 120 130 140 150 160
pF1KB6 PPPPPPPVLLPSEEEAPAPMGASLIADLEQLHLSPPPPPPQAPAEGPSVQPGPLRPMEEE
: : :. : : .:::. : : :: .. :::. :. . .:
CCDS59 PGACPAPARSP-EPAGPAPF---------PLPALPLPPGREG---GPSAAERRLEALTRE
170 180 190 200
170 180 190 200 210 220
pF1KB6 LPPPPAEPVEKGASTD---ICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQS
: . .: .. : :: : .. . : .:: ::..:::: .: :.: :..
CCDS59 LE----RALEARTARDYFGICIKCGLGIYGAQQACQAMGSLYHTDCFTCDSCGRRLRGKA
210 220 230 240 250 260
230 240 250 260 270
pF1KB6 FYQKDGRPLCEP-----CYQDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIG
::. . :. .:.: ..:. ::... . :..:::...::.:: : .: .:.
CCDS59 FYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECLD
270 280 290 300 310 320
280 290 300 310 320 330
pF1KB6 DESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDG-KDAFKIECMGRNFHENCYRCE
:.. .:..::. :.. ::: :. : ::.: .: . .... : :..: ::.::
CCDS59 GVPFTVDVENNIYCVRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVACYHCE
330 340 350 360 370 380
340 350 360 370
pF1KB6 DCRILLSVEPTDQGCYPLNNHLFCKPCHVKRSAAGCC
:: . :: : . :::: .::.:. ::..: :
CCDS59 DCGLQLSGEE-GRRCYPLAGHLLCRRCHLRRLQPGPLPSPTVHVTEL
390 400 410 420 430
373 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:19:28 2016 done: Fri Nov 4 23:19:29 2016
Total Scan time: 2.420 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]