Result of FASTA (ccds) for
pF1KB6523
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6523, 364 aa
1>>>pF1KB6523 364 - 364 aa - 364 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1304+/-0.000762; mu= 10.4591+/- 0.046
mean_var=181.3877+/-37.193, 0's: 0 Z-trim(115.1): 83 B-trim: 0 in 0/54
Lambda= 0.095229
statistics sampled from 15611 (15702) to 15611 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.482), width: 16
Scan time: 3.230
The best scores are: opt bits E(32554)
CCDS8936.1 STAC3 gene_id:246329|Hs108|chr12 ( 364) 2515 357.2 1.3e-98
CCDS66406.1 STAC3 gene_id:246329|Hs108|chr12 ( 325) 2269 323.4 1.8e-88
CCDS66405.1 STAC3 gene_id:246329|Hs108|chr12 ( 178) 1214 178.1 5e-45
CCDS11335.1 STAC2 gene_id:342667|Hs108|chr17 ( 411) 467 75.9 6.9e-14
CCDS77722.1 STAC gene_id:6769|Hs108|chr3 ( 341) 431 70.9 1.9e-12
CCDS2662.1 STAC gene_id:6769|Hs108|chr3 ( 402) 431 70.9 2.1e-12
>>CCDS8936.1 STAC3 gene_id:246329|Hs108|chr12 (364 aa)
initn: 2515 init1: 2515 opt: 2515 Z-score: 1884.1 bits: 357.2 E(32554): 1.3e-98
Smith-Waterman score: 2515; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KB6 MTEKEVLESPKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQANGEAVGAGGGPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 MTEKEVLESPKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQANGEAVGAGGGPI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 YYIYEEEEEEEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 YYIYEEEEEEEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 KNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 KNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LRTGVIMANKERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 LRTGVIMANKERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 HKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 HKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 IIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDF
310 320 330 340 350 360
pF1KB6 LEEI
::::
CCDS89 LEEI
>>CCDS66406.1 STAC3 gene_id:246329|Hs108|chr12 (325 aa)
initn: 2269 init1: 2269 opt: 2269 Z-score: 1702.0 bits: 323.4 E(32554): 1.8e-88
Smith-Waterman score: 2269; 100.0% identity (100.0% similar) in 325 aa overlap (40-364:1-325)
10 20 30 40 50 60
pF1KB6 PKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQANGEAVGAGGGPIYYIYEEEEE
::::::::::::::::::::::::::::::
CCDS66 MELPPEPQANGEAVGAGGGPIYYIYEEEEE
10 20 30
70 80 90 100 110 120
pF1KB6 EEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHE
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 HCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFETLRTGVIMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 HCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFETLRTGVIMAN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 KERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 KERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQS
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB6 HYFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 HYFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGER
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB6 VHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 VHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
280 290 300 310 320
>>CCDS66405.1 STAC3 gene_id:246329|Hs108|chr12 (178 aa)
initn: 1214 init1: 1214 opt: 1214 Z-score: 921.9 bits: 178.1 E(32554): 5e-45
Smith-Waterman score: 1214; 100.0% identity (100.0% similar) in 178 aa overlap (187-364:1-178)
160 170 180 190 200 210
pF1KB6 YSNQQYACVKDLSAANRNDPVFETLRTGVIMANKERKKGQADKKNPVAAMMEEEPESARP
::::::::::::::::::::::::::::::
CCDS66 MANKERKKGQADKKNPVAAMMEEEPESARP
10 20 30
220 230 240 250 260 270
pF1KB6 EEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITV
40 50 60 70 80 90
280 290 300 310 320 330
pF1KB6 IDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 IDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQ
100 110 120 130 140 150
340 350 360
pF1KB6 KGDEAGGYVKVYTGRKVGLFPTDFLEEI
::::::::::::::::::::::::::::
CCDS66 KGDEAGGYVKVYTGRKVGLFPTDFLEEI
160 170
>>CCDS11335.1 STAC2 gene_id:342667|Hs108|chr17 (411 aa)
initn: 734 init1: 340 opt: 467 Z-score: 362.8 bits: 75.9 E(32554): 6.9e-14
Smith-Waterman score: 732; 38.8% identity (64.4% similar) in 317 aa overlap (77-364:95-411)
50 60 70 80 90 100
pF1KB6 QANGEAVGAGGGPIYYIYEEEEEEEEEEEEPPPEPPKLVNDKP---HKFKDHFFKKPKFC
: : : :. :: :.:..: ::. . :
CCDS11 EVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPC
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 DVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQY-
..: ..:: :.: ::::: ::...: :. . :.: :: .:.: .:::: ..
CCDS11 ELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPP
130 140 150 160 170 180
170 180 190 200 210
pF1KB6 ACVKDLSA-----ANRNDPVFETLRTGVIMANKERKKGQADKKNPVAAMME-----EEPE
.:. . . ... :::.:::: :. .: .:.. .. ...:. .. : :. :
CCDS11 VCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGE
190 200 210 220 230 240
220 230 240 250
pF1KB6 -SARP-EEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQS-----------HYFVALYRFK
: : ::: ....: ::.. : ..:.:: : . .::::.:
CCDS11 GSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFL
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB6 ALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVG
:..:: . ::..: ..:::::.::.::::..::::: ::. ::: :: : : . : :
CCDS11 PQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSG
310 320 330 340 350 360
320 330 340 350 360
pF1KB6 NREIGQITLKKDQIVVQKG--DEAGGYVKVYTGRKVGLFPTDFLEEI
:.: : ..::..:: : : .: :...: .:.: :: :.: : ::
CCDS11 NKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI
370 380 390 400 410
>>CCDS77722.1 STAC gene_id:6769|Hs108|chr3 (341 aa)
initn: 581 init1: 417 opt: 431 Z-score: 337.1 bits: 70.9 E(32554): 1.9e-12
Smith-Waterman score: 490; 28.9% identity (52.8% similar) in 388 aa overlap (4-364:17-341)
10 20 30 40
pF1KB6 MTEKEVLESPKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQ
::.. . .: :: : .: ..:..: :. : :: .. .
CCDS77 MIPPSSPREDGVDGLPKEAVGAEQPPSPAST-SSQESKLQKLKRSLSFKTKSLR----SK
10 20 30 40 50
50 60 70 80 90
pF1KB6 ANGEAVGAGGGPIYYIYEEEEEEEEEEEEPPPEPPKLVND----------KPHKFKDHFF
. . .. . . . : : : : .:.. : : :....:
CCDS77 SADNFFQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFQEYIF
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB6 KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLY
::: ::::: .:::
CCDS77 KKPTFCDVCNHMIV----------------------------------------------
120
160 170 180 190 200 210
pF1KB6 SNQQYACVKDLSAANRNDPVFETLRTGVIMANKERK----KGQADKKNPVAAMMEEEPES
:: .:. :::.:::: :. .:.. .: .:. . . .. . : ::
CCDS77 -----AC------GNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEE
130 140 150 160 170
220 230 240 250 260
pF1KB6 ARPEEGK-------------PQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALYRFKA
: : :..:. . :.. . . . .. .:.. : ::::.:
CCDS77 ANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTY-VALYKFVP
180 190 200 210 220 230
270 280 290 300 310 320
pF1KB6 LEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGN
:..::.. ::. ::...::::.::.::: ...:::: ::. :.. .:.. : .:.:.:
CCDS77 QENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGC
240 250 260 270 280 290
330 340 350 360
pF1KB6 REIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
.: ::::::..:: :.. .: :...: .:.: ::.: : ::.:
CCDS77 KEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
300 310 320 330 340
>>CCDS2662.1 STAC gene_id:6769|Hs108|chr3 (402 aa)
initn: 773 init1: 417 opt: 431 Z-score: 336.2 bits: 70.9 E(32554): 2.1e-12
Smith-Waterman score: 809; 35.5% identity (63.3% similar) in 392 aa overlap (4-364:17-402)
10 20 30 40
pF1KB6 MTEKEVLESPKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQ
::.. . .: :: : .: ..:..: :. : :: .. .
CCDS26 MIPPSSPREDGVDGLPKEAVGAEQPPSPAST-SSQESKLQKLKRSLSFKTKSLR----SK
10 20 30 40 50
50 60 70 80 90
pF1KB6 ANGEAVGAGGGPIYYIYEEEEEEEEEEEEPPPEPPKLVND----------KPHKFKDHFF
. . .. . . . : : : : .:.. : : :....:
CCDS26 SADNFFQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFQEYIF
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB6 KKPKFCDVCARMIV-LNNKFGLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPL
::: ::::: .::: : : ::::: :: .::..: . . :::.::.: ::.: :::::
CCDS26 KKPTFCDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPL
120 130 140 150 160 170
160 170 180 190 200
pF1KB6 YSNQQYACVKD---LSAANRNDPVFETLRTGVIMANKERK----KGQADKKNPVAAMMEE
..:..:.:. .. .:. :::.:::: :. .:.. .: .:. . . .. . :
CCDS26 LIHEQFGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVE
180 190 200 210 220 230
210 220 230 240 250
pF1KB6 EPESARPEEGK-------------PQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALY
:: : : :..:. . :.. . . . .. .:.. : ::::
CCDS26 VPEEANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTY-VALY
240 250 260 270 280 290
260 270 280 290 300 310
pF1KB6 RFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRS
.: :..::.. ::. ::...::::.::.::: ...:::: ::. :.. .:.. : .:.
CCDS26 KFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRT
300 310 320 330 340 350
320 330 340 350 360
pF1KB6 FVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
:.: .: ::::::..:: :.. .: :...: .:.: ::.: : ::.:
CCDS26 FIGCKEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
360 370 380 390 400
364 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 16:53:54 2016 done: Sat Nov 5 16:53:55 2016
Total Scan time: 3.230 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]